Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N24
(455 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 87 8e-18
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 86 1e-17
U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal prote... 33 0.099
AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal pro... 33 0.099
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 32 0.17
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 31 0.30
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 31 0.30
AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical ... 31 0.30
Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical pr... 27 6.5
AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical ... 27 6.5
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 8.6
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 86.6 bits (205), Expect = 8e-18
Identities = 49/106 (46%), Positives = 59/106 (55%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLAVLGG P D++ ILS+VG++AD E K V++ L GK VE+LIA G L S+
Sbjct: 7 YLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSVS 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
G + K KK KE ESDDDMGFGLFD
Sbjct: 67 GGAAPAAAAAPAAGGAAPAADSKPAKKEEPKE--ESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 86.2 bits (204), Expect = 1e-17
Identities = 47/106 (44%), Positives = 62/106 (58%)
Frame = +3
Query: 69 YLLAVLGGKTTPAAADVEKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMP 248
YLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+ KLSS+P
Sbjct: 7 YLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSVP 66
Query: 249 VGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDDMGFGLFD 386
GG EE K+++ KE ESDDDMGFGLFD
Sbjct: 67 SGGSAPAAAAPSGGAAPKAEEKKKEE---PKE--ESDDDMGFGLFD 107
>U89307-1|AAB48625.1| 111|Caenorhabditis elegans ribosomal protein
P1 homolog protein.
Length = 111
Score = 33.1 bits (72), Expect = 0.099
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +3
Query: 186 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDD 365
L G DV+ LI + S P + KE+ K ESDDD
Sbjct: 51 LEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPK------EESDDD 104
Query: 366 MGFGLFD 386
MGFGLFD
Sbjct: 105 MGFGLFD 111
>AC087079-6|AAK27864.1| 111|Caenorhabditis elegans Ribosomal
protein, acidic protein 1 protein.
Length = 111
Score = 33.1 bits (72), Expect = 0.099
Identities = 23/67 (34%), Positives = 27/67 (40%)
Frame = +3
Query: 186 LNGKDVEQLIAAGREKLSSMPVGGGXXXXXXXXXXXXXXXEEXKEDKKXXXKEXSESDDD 365
L G DV+ LI + S P + KE+ K ESDDD
Sbjct: 51 LEGVDVKNLITSVSSGAGSGPAPAAAAAAPAAGGAAPAAETKKKEEPK------EESDDD 104
Query: 366 MGFGLFD 386
MGFGLFD
Sbjct: 105 MGFGLFD 111
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 32.3 bits (70), Expect = 0.17
Identities = 16/21 (76%), Positives = 16/21 (76%)
Frame = +3
Query: 324 KKXXXKEXSESDDDMGFGLFD 386
KK KE ESDDDMGFGLFD
Sbjct: 294 KKEEPKE--ESDDDMGFGLFD 312
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.30
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 96 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 215
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.5 bits (68), Expect = 0.30
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +3
Query: 96 TTPAAADVEKILSSVGIEADGEKLKKVITEL-NGKDVEQLI 215
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>AF106584-6|AAC78220.1| 424|Caenorhabditis elegans Hypothetical
protein F54A5.1 protein.
Length = 424
Score = 31.5 bits (68), Expect = 0.30
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 259 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLP 89
P P SRP+AI +TS S + + PS S P+ L +F+ + GV LP
Sbjct: 340 PSPAVSTFEVSRPSAIISATSSTTSPISIPATIIPSVS-PSALELFAMAQQLGVQLP 395
>Z22179-9|CAD90178.1| 428|Caenorhabditis elegans Hypothetical
protein F58A4.7c protein.
Length = 428
Score = 27.1 bits (57), Expect = 6.5
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -2
Query: 259 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 104
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 103 GVVLPPSTAS 74
V ST +
Sbjct: 360 AVTSAMSTGN 369
>Z22179-8|CAA80170.2| 431|Caenorhabditis elegans Hypothetical
protein F58A4.7b protein.
Length = 431
Score = 27.1 bits (57), Expect = 6.5
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -2
Query: 259 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 104
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 302 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 361
Query: 103 GVVLPPSTAS 74
V ST +
Sbjct: 362 AVTSAMSTGN 371
>Z22179-7|CAA80167.2| 429|Caenorhabditis elegans Hypothetical
protein F58A4.7a protein.
Length = 429
Score = 27.1 bits (57), Expect = 6.5
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Frame = -2
Query: 259 PPPT--GIDDSFSRPAA---ISCSTSLPLSSVITFLSFSP---SASIPTELRIFSTSAAA 104
PPPT ++ + RP IS S P S + L+ +P S ++PT+ I +AAA
Sbjct: 300 PPPTLPSLETTVIRPTPLPPISVEISSPSLSTPSPLTAAPIIFSTAVPTQSSILFQTAAA 359
Query: 103 GVVLPPSTAS 74
V ST +
Sbjct: 360 AVTSAMSTGN 369
>AL032644-4|CAA21665.1| 490|Caenorhabditis elegans Hypothetical
protein Y51H1A.4 protein.
Length = 490
Score = 27.1 bits (57), Expect = 6.5
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +3
Query: 120 EKILSSVGIEADGEKLKKVITELNGKDVEQLIAAGREKLSSMPVGGG 260
EK +EAD + ++I + + VE L+ A +E+ VGGG
Sbjct: 101 EKTTFQCEMEADNSGVTEMIEKRYTQHVESLLTARKERKRRHRVGGG 147
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 26.6 bits (56), Expect = 8.6
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -2
Query: 211 SCSTSLPLSSVITFLSFSPSASIPTELRIFSTSAAAGVVLPPSTASK 71
S ST P+S+ + + + SIP+ S+ + + PPS+ASK
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASK 482
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,809,653
Number of Sequences: 27780
Number of extensions: 116241
Number of successful extensions: 433
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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