Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N18
(422 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|R... 144 7e-34
UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110... 129 2e-29
UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia ob... 124 6e-28
UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4; Eukar... 122 2e-27
UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68; Euka... 120 9e-27
UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4; ... 114 6e-25
UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S riboso... 106 2e-22
UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n... 101 8e-21
UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2; ... 100 2e-20
UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=... 96 3e-19
UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkie... 94 1e-18
UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing prote... 93 2e-18
UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6; T... 85 4e-16
UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2; Apanspo... 82 5e-15
UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S riboso... 76 3e-13
UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillar... 76 3e-13
UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin re... 63 3e-09
UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiell... 50 2e-05
UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n... 49 5e-05
UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2; Thermoprot... 45 6e-04
UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|R... 40 0.021
UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5; Crenar... 39 0.048
UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10; Thermoprot... 38 0.085
UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011; ... 32 4.2
UniRef50_Q8JTX8 Cluster: Interleukin-1 receptor-like protein; n=... 32 4.2
UniRef50_UPI0000DA2FA4 Cluster: PREDICTED: similar to Guanine nu... 32 5.6
UniRef50_P28818 Cluster: Guanine nucleotide-releasing protein; n... 32 5.6
UniRef50_O14827 Cluster: Ras protein-specific guanine nucleotide... 31 7.4
UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26; Eu... 31 9.7
>UniRef50_Q0ZD84 Cluster: Ribosomal protein S26; n=9; Coelomata|Rep:
Ribosomal protein S26 - Pectinaria gouldii (Trumpet
worm) (Ice-cream cone worm)
Length = 109
Score = 144 bits (349), Expect = 7e-34
Identities = 68/87 (78%), Positives = 74/87 (85%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASVY + LPKLYAKLHYCVSCAIHSK
Sbjct: 23 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVYEGYPLPKLYAKLHYCVSCAIHSK 82
Query: 229 VVRNRSXKDRRIRTPPKSNFPRDMSRP 309
VVRNRS + R+ RTPP P M +P
Sbjct: 83 VVRNRSREARKDRTPPPRFKPGAMRKP 109
>UniRef50_Q5JNZ5 Cluster: 40S ribosomal protein S26-like 1; n=110;
Fungi/Metazoa group|Rep: 40S ribosomal protein S26-like
1 - Homo sapiens (Human)
Length = 115
Score = 129 bits (312), Expect = 2e-29
Identities = 59/76 (77%), Positives = 65/76 (85%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
CTNC RCVP DKAIKKFVIRNIVEAAAVRDI++ SV+ + LPKLY KLHYCVSCAIHSK
Sbjct: 23 CTNCVRCVPTDKAIKKFVIRNIVEAAAVRDISEVSVFDAYVLPKLYVKLHYCVSCAIHSK 82
Query: 229 VVRNRSXKDRRIRTPP 276
VVRNRS + + RTPP
Sbjct: 83 VVRNRSREACKDRTPP 98
>UniRef50_Q5MGL0 Cluster: Ribosomal protein S26e; n=1; Lonomia
obliqua|Rep: Ribosomal protein S26e - Lonomia obliqua
(Moth)
Length = 82
Score = 124 bits (300), Expect = 6e-28
Identities = 56/71 (78%), Positives = 63/71 (88%)
Frame = +1
Query: 112 IVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKVVRNRSXKDRRIRTPPKSNFP 291
+++ +RDIN+ASVY FQLPKLYAKLHYCVSCAIHSKVVRNRS KDRRIRTPPK+ FP
Sbjct: 11 LLKLLPLRDINEASVYTSFQLPKLYAKLHYCVSCAIHSKVVRNRSKKDRRIRTPPKNTFP 70
Query: 292 RDMSRPQAVQR 324
RDM+RPQ VQR
Sbjct: 71 RDMARPQNVQR 81
>UniRef50_Q8LPJ7 Cluster: 40S ribosomal protein S26-2; n=4;
Eukaryota|Rep: 40S ribosomal protein S26-2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 122 bits (295), Expect = 2e-27
Identities = 55/91 (60%), Positives = 67/91 (73%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C+NC +C PKDKAIK+F++RNIVE AA+RD+ +ASVY + LPKLYAK YCVSCAIHS
Sbjct: 23 CSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYEGYTLPKLYAKTQYCVSCAIHSH 82
Query: 229 VVRNRSXKDRRIRTPPKSNFPRDMSRPQAVQ 321
VVR RS +RR+RTPP R P+ Q
Sbjct: 83 VVRVRSRTNRRVRTPPPRFARRKEDTPKPGQ 113
>UniRef50_P39938 Cluster: 40S ribosomal protein S26-A; n=68;
Eukaryota|Rep: 40S ribosomal protein S26-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 119
Score = 120 bits (290), Expect = 9e-27
Identities = 51/77 (66%), Positives = 65/77 (84%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C NC++ +PKDKAIK+ IRNIVEAAAVRD+++ASVYP + LPK Y KLHYCVSCAIH++
Sbjct: 23 CVNCSKSIPKDKAIKRMAIRNIVEAAAVRDLSEASVYPEYALPKTYNKLHYCVSCAIHAR 82
Query: 229 VVRNRSXKDRRIRTPPK 279
+VR RS +DR+ R PP+
Sbjct: 83 IVRVRSREDRKNRAPPQ 99
>UniRef50_UPI000049A1F9 Cluster: 40S ribosomal protein S26; n=4;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S26 - Entamoeba histolytica HM-1:IMSS
Length = 147
Score = 114 bits (275), Expect = 6e-25
Identities = 54/91 (59%), Positives = 67/91 (73%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C++C RCVPKDKAIK++ I+NIVEAAAVRDI+D S ++LPK Y KL YCVSC IH +
Sbjct: 23 CSHCGRCVPKDKAIKRYQIKNIVEAAAVRDISDNSALTKYKLPKTYMKLEYCVSCGIHGR 82
Query: 229 VVRNRSXKDRRIRTPPKSNFPRDMSRPQAVQ 321
VVR RS DRR R PPK + ++ QAV+
Sbjct: 83 VVRVRSRTDRRNRLPPK-RVVKKTNKQQAVK 112
>UniRef50_UPI0000E1F674 Cluster: PREDICTED: similar to 40S ribosomal
protein S26-2, partial; n=4; Pan troglodytes|Rep:
PREDICTED: similar to 40S ribosomal protein S26-2,
partial - Pan troglodytes
Length = 196
Score = 106 bits (255), Expect = 2e-22
Identities = 54/90 (60%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPK--LYAKLHYCVSCAIH 222
CTN A+ VPKDKAIKKF+IRN+VEAAAVRDI++ASV+ + LPK LY KL+YCV CAIH
Sbjct: 18 CTNYAQRVPKDKAIKKFIIRNVVEAAAVRDISEASVFNAYVLPKLYLYVKLNYCVRCAIH 77
Query: 223 SKVVRNRSXKDRRIRTPPKSNFPRDMSRPQ 312
KVVRN K + +T P P + PQ
Sbjct: 78 GKVVRNPPCKAHKDQTHPPRFRPSRSAAPQ 107
>UniRef50_UPI00001CB188 Cluster: UPI00001CB188 related cluster; n=2;
Rattus norvegicus|Rep: UPI00001CB188 UniRef100 entry -
Rattus norvegicus
Length = 107
Score = 101 bits (241), Expect = 8e-21
Identities = 48/75 (64%), Positives = 58/75 (77%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C + A C+PKDKAIK F+I+NI+EAAAVRDI+ A+V+ + LP LY KLHYCVSCAIHS+
Sbjct: 24 CRSSAWCLPKDKAIK-FIIQNILEAAAVRDIDKANVFKAYMLPMLYVKLHYCVSCAIHSE 82
Query: 229 VVRNRSXKDRRIRTP 273
VVRN K RR P
Sbjct: 83 VVRNHLLKLRRTEHP 97
>UniRef50_Q01E61 Cluster: Ribosomal protein S26, cytosolic; n=2;
Ostreococcus|Rep: Ribosomal protein S26, cytosolic -
Ostreococcus tauri
Length = 221
Score = 99.5 bits (237), Expect = 2e-20
Identities = 43/83 (51%), Positives = 62/83 (74%)
Frame = +1
Query: 31 TLKLCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVS 210
++K C + VPKDKA+++F++RNIVE+AA+RD+ ++ + + LPKLY K++Y +S
Sbjct: 126 SVKRVFCESSGALVPKDKAVRRFMVRNIVESAAIRDLQESCAFESYTLPKLYRKVYYSIS 185
Query: 211 CAIHSKVVRNRSXKDRRIRTPPK 279
AIHSKVVR RS + RRIR PPK
Sbjct: 186 AAIHSKVVRVRSREARRIRDPPK 208
>UniRef50_A2DST7 Cluster: 40S ribosomal protein S26, putative; n=1;
Trichomonas vaginalis G3|Rep: 40S ribosomal protein S26,
putative - Trichomonas vaginalis G3
Length = 118
Score = 95.9 bits (228), Expect = 3e-19
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C NC R VPKDKAI +F I+N+V+A++ +D++DA +Y ++LPK Y K +YCVSCA+H
Sbjct: 23 CMNCGRQVPKDKAITRFAIKNMVDASSAKDVSDACIYQGYELPKTYQKQYYCVSCAVHRH 82
Query: 229 VVRNRSXKDRRIRTP 273
VVR R+ RR R P
Sbjct: 83 VVRPRNVNVRRNRVP 97
>UniRef50_Q9BHU1 Cluster: 40S ribosomal protein S26; n=1; Sterkiella
nova|Rep: 40S ribosomal protein S26 - Oxytricha nova
Length = 125
Score = 93.9 bits (223), Expect = 1e-18
Identities = 48/91 (52%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPM--FQLPKLYAKLHYCVSCAIH 222
CTNC R V KDKAIK+F RN+V+A++ RDI + Y F +PK+Y KL YCVSCAIH
Sbjct: 23 CTNCGRVVSKDKAIKRFQQRNMVDASSKRDIQENYAYAQSDFTMPKIYVKLSYCVSCAIH 82
Query: 223 SKVVRNRSXKDRRIRTPPKSNFPRDMSRPQA 315
+++VR RS +DRR R K R RP+A
Sbjct: 83 ARIVRVRSVEDRRHRYTTKL---RQHVRPEA 110
>UniRef50_Q23PT4 Cluster: Ribosomal protein S26e containing protein;
n=12; Alveolata|Rep: Ribosomal protein S26e containing
protein - Tetrahymena thermophila SB210
Length = 197
Score = 93.5 bits (222), Expect = 2e-18
Identities = 42/81 (51%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQ--LPKLYAKLHYCVSCAIH 222
CTNC R V KDKA+K++ +R++V+ ++ RDI + + +PKLY KL YC+SCAIH
Sbjct: 101 CTNCGRQVAKDKAVKRYTVRDMVDPSSKRDIQQKLAFENEKQGIPKLYVKLQYCISCAIH 160
Query: 223 SKVVRNRSXKDRRIRTPPKSN 285
S+VVR R +DRRIR PP N
Sbjct: 161 SRVVRVRCAEDRRIRRPPIRN 181
>UniRef50_Q4Q6X0 Cluster: Ribosomal protein s26, putative; n=6;
Trypanosomatidae|Rep: Ribosomal protein s26, putative -
Leishmania major
Length = 112
Score = 85.4 bits (202), Expect = 4e-16
Identities = 40/82 (48%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDAS-VY-PMFQLPKLYAKLHYCVSCAIH 222
C NC R PKDKA+ +FV+R +++AA+ RD+ +AS VY F +PKLY K +C++CAIH
Sbjct: 25 CFNCGRLTPKDKAVGRFVVRRMLDAASARDVAEASPVYGANFPMPKLYMKQRFCIACAIH 84
Query: 223 SKVVRNRSXKDRRIRTPPKSNF 288
S+ VR R +R+IR K F
Sbjct: 85 SRTVRARPVGNRKIRYTKKVPF 106
>UniRef50_Q8SRN2 Cluster: 40S RIBOSOMAL PROTEIN S26; n=2;
Apansporoblastina|Rep: 40S RIBOSOMAL PROTEIN S26 -
Encephalitozoon cuniculi
Length = 105
Score = 81.8 bits (193), Expect = 5e-15
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C C PKDKAIK+F I++++E A+ D+ A++Y +F++P++ K +CVSCA H+K
Sbjct: 20 CDKCGSVTPKDKAIKRFRIQSLIEQASFDDLKQATIYDVFEVPRMGYKSQFCVSCACHAK 79
Query: 229 VVRNRSXKDRRIR 267
+VR RS + R+IR
Sbjct: 80 IVRVRSSQARKIR 92
>UniRef50_UPI00005A1FB7 Cluster: PREDICTED: similar to 40S ribosomal
protein S26 isoform 3; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to 40S ribosomal protein S26 isoform
3 - Canis familiaris
Length = 118
Score = 76.2 bits (179), Expect = 3e-13
Identities = 34/37 (91%), Positives = 37/37 (100%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVY 159
CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI++ASV+
Sbjct: 23 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVF 59
>UniRef50_Q9AW37 Cluster: 40S ribosomal protein S26; n=1; Guillardia
theta|Rep: 40S ribosomal protein S26 - Guillardia theta
(Cryptomonas phi)
Length = 98
Score = 75.8 bits (178), Expect = 3e-13
Identities = 32/73 (43%), Positives = 51/73 (69%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C + VPKDKAI ++VI+NIV+ +++RD+ D+ +Y + +PKLY K + + AIH++
Sbjct: 23 CNLTGKLVPKDKAIVRYVIKNIVDLSSLRDLQDSCIYEYYTMPKLYYKNTFSIESAIHNR 82
Query: 229 VVRNRSXKDRRIR 267
+VR RS DR+ R
Sbjct: 83 IVRVRSKADRKKR 95
>UniRef50_UPI0000DA2056 Cluster: PREDICTED: similar to Ankyrin
repeat domain protein 11 (Ankyrin repeat-containing
cofactor 1); n=1; Rattus norvegicus|Rep: PREDICTED:
similar to Ankyrin repeat domain protein 11 (Ankyrin
repeat-containing cofactor 1) - Rattus norvegicus
Length = 682
Score = 62.9 bits (146), Expect = 3e-09
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +1
Query: 55 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKL 195
NC + +PKDKA KKFV RNIVEAAAVRDI +A+V LPK Y KL
Sbjct: 44 NCVQYMPKDKASKKFVTRNIVEAAAVRDIAEANVLDANVLPKFYIKL 90
>UniRef50_Q3LVZ2 Cluster: Ribosomal protein S26; n=1; Bigelowiella
natans|Rep: Ribosomal protein S26 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 98
Score = 50.0 bits (114), Expect = 2e-05
Identities = 24/72 (33%), Positives = 40/72 (55%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C + VP+DKAIKK ++++ ++D + V P ++ PKLY+ + Y +S A K
Sbjct: 23 CMSSNALVPRDKAIKKLNVKSLFFPNILKDTPNVFVLPGYKAPKLYSYVFYSISSAFSQK 82
Query: 229 VVRNRSXKDRRI 264
++ K RRI
Sbjct: 83 FIKPGRKKYRRI 94
>UniRef50_UPI0000DC1C52 Cluster: UPI0000DC1C52 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC1C52 UniRef100 entry -
Rattus norvegicus
Length = 70
Score = 48.8 bits (111), Expect = 5e-05
Identities = 31/59 (52%), Positives = 34/59 (57%)
Frame = +1
Query: 55 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSKV 231
N C+ KDKA KFVI+NIVEAAA+R Y KLH CVSCAIH KV
Sbjct: 28 NFTGCMTKDKA-NKFVIQNIVEAAAIR---------------FYVKLHCCVSCAIHIKV 70
>UniRef50_A3H8X5 Cluster: Ribosomal protein S26E; n=2;
Thermoprotei|Rep: Ribosomal protein S26E - Caldivirga
maquilingensis IC-167
Length = 152
Score = 45.2 bits (102), Expect = 6e-04
Identities = 23/88 (26%), Positives = 43/88 (48%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C NC + +P+ KA++ V + + +++ +P+ Y YCV+CAI+
Sbjct: 27 CDNCGKMIPRSKAVRVTVPYSPIPTDLAKELEKQGAI----VPRYYITKTYCVNCAIYLG 82
Query: 229 VVRNRSXKDRRIRTPPKSNFPRDMSRPQ 312
+++ RS +R+ + P R RPQ
Sbjct: 83 IIKVRSEDERKSKKP----ILRGQQRPQ 106
>UniRef50_Q6CS02 Cluster: Similarity; n=1; Kluyveromyces lactis|Rep:
Similarity - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 157
Score = 39.9 bits (89), Expect = 0.021
Identities = 26/71 (36%), Positives = 33/71 (46%)
Frame = -3
Query: 282 TLGRSTDSSVFXRSVPDNFAVDGA*HAXXXXXXXXXXXEHWVYRGIVNISDRRRFYDVPN 103
+L RS+DSSV S +N +VD A + V RG ISD F DV +
Sbjct: 30 SLWRSSDSSVSSGSDSNNSSVDSARNTVVQLVVGLWKSIFSVDRGFRQISDSSSFNDVSD 89
Query: 102 HELFDSLVLWH 70
D LVLW+
Sbjct: 90 SHSLDGLVLWN 100
>UniRef50_Q05DX2 Cluster: 30S ribosomal protein S26e; n=5;
Crenarchaeota|Rep: 30S ribosomal protein S26e -
Aeropyrum pernix
Length = 95
Score = 38.7 bits (86), Expect = 0.048
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C NC R VP DKAI + + V+ ++ M + P YCVSCA+H
Sbjct: 23 CDNCGRVVPADKAICVTRMYSPVDPQLAEELEKKGAIIM-RYPVTKC---YCVSCAVHYG 78
Query: 229 VVRNRSXKDRR 261
+V+ R + R+
Sbjct: 79 IVKIRPEEQRK 89
>UniRef50_Q8ZVQ6 Cluster: Ribosomal protein S26; n=10;
Thermoprotei|Rep: Ribosomal protein S26 - Pyrobaculum
aerophilum
Length = 98
Score = 37.9 bits (84), Expect = 0.085
Identities = 17/75 (22%), Positives = 37/75 (49%)
Frame = +1
Query: 49 CTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAIHSK 228
C NC + +P+ KA++ V + V R++ + + YC++CA+
Sbjct: 23 CDNCGKIMPRSKAVRVTVPYSPVPPDLARELEKQGAI----ISRYLVTKTYCINCAVFFG 78
Query: 229 VVRNRSXKDRRIRTP 273
+++ RS ++R+ + P
Sbjct: 79 IIKVRSREERKKKIP 93
>UniRef50_UPI0000499B8D Cluster: hypothetical protein 53.t00011;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 53.t00011 - Entamoeba histolytica HM-1:IMSS
Length = 586
Score = 32.3 bits (70), Expect = 4.2
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +1
Query: 55 NCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAK 192
N ++C+PKDK++ ++V N ++ +RDI +VY + + KL K
Sbjct: 173 NESKCIPKDKSLNEYVENNPIK-FTIRDI--VTVYSISDIKKLMMK 215
>UniRef50_Q8JTX8 Cluster: Interleukin-1 receptor-like protein; n=5;
Capripoxvirus|Rep: Interleukin-1 receptor-like protein -
Lumpy skin disease virus (LSDV)
Length = 341
Score = 32.3 bits (70), Expect = 4.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 40 LCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDIN 144
LC T RC PK+ A+K++ N+++ DIN
Sbjct: 195 LCSITTATRCNPKNLALKRYYHNNVIKKRFKDDIN 229
>UniRef50_UPI0000DA2FA4 Cluster: PREDICTED: similar to Guanine
nucleotide-releasing protein (GNRP) (P140 Ras-GRF); n=1;
Rattus norvegicus|Rep: PREDICTED: similar to Guanine
nucleotide-releasing protein (GNRP) (P140 Ras-GRF) -
Rattus norvegicus
Length = 1245
Score = 31.9 bits (69), Expect = 5.6
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 40 LCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI 219
L + +C + DK +K++ + E R + YPMFQ+P+ LH ++
Sbjct: 344 LQILAHCKQNRDFDKLLKQYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTP 400
Query: 220 HSKVVRN 240
H V RN
Sbjct: 401 HEHVERN 407
>UniRef50_P28818 Cluster: Guanine nucleotide-releasing protein;
n=24; Euteleostomi|Rep: Guanine nucleotide-releasing
protein - Rattus norvegicus (Rat)
Length = 1244
Score = 31.9 bits (69), Expect = 5.6
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +1
Query: 40 LCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI 219
L + +C + DK +K++ + E R + YPMFQ+P+ LH ++
Sbjct: 344 LQILAHCKQNRDFDKLLKQYEAKPDCEE---RTLETFLTYPMFQIPRYILTLHELLAHTP 400
Query: 220 HSKVVRN 240
H V RN
Sbjct: 401 HEHVERN 407
>UniRef50_O14827 Cluster: Ras protein-specific guanine
nucleotide-releasing factor 2; n=28; cellular
organisms|Rep: Ras protein-specific guanine
nucleotide-releasing factor 2 - Homo sapiens (Human)
Length = 1237
Score = 31.5 bits (68), Expect = 7.4
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = +1
Query: 40 LCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCAI 219
L V NC + DK +K++ E R + YPMFQ+P+ LH ++
Sbjct: 347 LQVLANCKQNRDFDKLLKQYEANPACEG---RMLETFLTYPMFQIPRYIITLHELLAHTP 403
Query: 220 HSKVVR 237
H V R
Sbjct: 404 HEHVER 409
>UniRef50_Q92570 Cluster: Orphan nuclear receptor NR4A3; n=26;
Euteleostomi|Rep: Orphan nuclear receptor NR4A3 - Homo
sapiens (Human)
Length = 626
Score = 31.1 bits (67), Expect = 9.7
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 184 YAKLHYCVSCAIHSKVVRNRSXKDRRIRTP--PKSNFPRDMSRP 309
Y + C+S + +VVR S K RR R P PKS ++ S+P
Sbjct: 346 YCRFQKCLSVGMVKEVVRTDSLKGRRGRLPSKPKSPLQQEPSQP 389
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,838,792
Number of Sequences: 1657284
Number of extensions: 5485987
Number of successful extensions: 13207
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 12869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13198
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19810951153
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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