Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_N18
         (422 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein ...   166   3e-43
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         24   2.6  
U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             22   8.0  
AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.        22   8.0  
AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.        22   8.0  

>AF283269-1|AAG15374.1|  114|Anopheles gambiae ribosomal protein S26
           protein.
          Length = 114

 Score =  166 bits (403), Expect = 3e-43
 Identities = 77/97 (79%), Positives = 85/97 (87%)
 Frame = +1

Query: 34  LKLCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSC 213
           +K   CTNCARCVPKDKAIKKFVIRNIVEAAAVRDI+DASVY  + LPKLYAKLHYCVSC
Sbjct: 17  VKAVRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISDASVYSSYVLPKLYAKLHYCVSC 76

Query: 214 AIHSKVVRNRSXKDRRIRTPPKSNFPRDMSRPQAVQR 324
           AIHSKVVRNRS + RRIRTPP+ +FP+DM+R Q  QR
Sbjct: 77  AIHSKVVRNRSKETRRIRTPPQRSFPKDMNRQQNAQR 113



 Score = 32.7 bits (71), Expect = 0.006
 Identities = 13/15 (86%), Positives = 13/15 (86%)
 Frame = +3

Query: 3  GGRAKHGRGHVKAVR 47
          GGR KH RGHVKAVR
Sbjct: 7  GGRCKHNRGHVKAVR 21


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 18/82 (21%), Positives = 34/82 (41%)
 Frame = +1

Query: 37   KLCVCTNCARCVPKDKAIKKFVIRNIVEAAAVRDINDASVYPMFQLPKLYAKLHYCVSCA 216
            KL     CA  V K + + ++ IR  + +    DI  ASV+   +         Y +   
Sbjct: 801  KLTPIWRCATTVRKGRKLYQYTIRLPINSPWKEDILIASVFNECRPDAETVAYLYHIRME 860

Query: 217  IHSKVVRNRSXKDRRIRTPPKS 282
            +   +   ++ + R+I  P +S
Sbjct: 861  LICPIPEEQNTRGRKIYAPEES 882


>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 254 TEESVLLPRVTSLGTCHVHRQ 316
           T+ S+  PR+T   T HV+ +
Sbjct: 176 TDGSIFPPRITKNSTLHVYEK 196


>AY735443-1|AAU08018.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 82  CPLARTARSLCRRTALT*PRPCLARP 5
           CP A+      R+ +   P  C+ RP
Sbjct: 102 CPKAKNGEKKFRKVSTKAPLECMCRP 127


>AY735442-1|AAU08017.1|  163|Anopheles gambiae bursicon protein.
          Length = 163

 Score = 22.2 bits (45), Expect = 8.0
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 82  CPLARTARSLCRRTALT*PRPCLARP 5
           CP A+      R+ +   P  C+ RP
Sbjct: 102 CPKAKNGEKKFRKVSTKAPLECMCRP 127


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 345,457
Number of Sequences: 2352
Number of extensions: 6593
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 35060166
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)