Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_N17
         (637 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0108 - 22830485-22830706,22830817-22830954,22831091-228313...    32   0.44 
02_05_0900 + 32616049-32616135,32616593-32616695,32616925-326170...    29   2.3  
07_01_0568 - 4216898-4216911,4216997-4217024,4217265-4217335,421...    29   3.1  
12_02_0796 + 23224357-23224427,23225714-23225810,23226335-232271...    27   9.4  
07_03_0676 + 20618677-20618840,20618938-20619502                       27   9.4  
03_02_0394 - 8081172-8081330,8082015-8082134,8082223-8082271,808...    27   9.4  

>04_04_0108 -
           22830485-22830706,22830817-22830954,22831091-22831355,
           22831490-22831725,22831906-22832421,22834960-22835300,
           22835453-22835459
          Length = 574

 Score = 31.9 bits (69), Expect = 0.44
 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = +2

Query: 443 GDYEVV--PHGSVSSDAKSCSGAGTETLXAGGRSMD 544
           G  EVV  PHG+V++D   CS  G + L  GG ++D
Sbjct: 32  GRREVVTSPHGAVAADDGRCSRIGRDALRDGGNAVD 67


>02_05_0900 +
           32616049-32616135,32616593-32616695,32616925-32617004,
           32617118-32617447,32617623-32617735,32617861-32617903,
           32617968-32618045,32618328-32618339
          Length = 281

 Score = 29.5 bits (63), Expect = 2.3
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -1

Query: 586 RRDRGEAQRXGDGGVHGAPARXQRLRARTGTRLRV*RHTAVRDHL 452
           +R R  +   G GGV   P+R Q L  +      + +  AV+DHL
Sbjct: 7   KRPRSRSGGGGGGGVEKRPSRKQILGRKKAVEELIRKAVAVKDHL 51


>07_01_0568 -
           4216898-4216911,4216997-4217024,4217265-4217335,
           4218026-4218140,4218245-4218314,4218552-4218646,
           4219320-4219379,4219476-4219547,4219676-4219819
          Length = 222

 Score = 29.1 bits (62), Expect = 3.1
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = -3

Query: 305 GAPPLLEEIVSRDCPGCSGSRLASSTAXKCXRNKLEMDTCTKSLDTARYNVLI 147
           G P L  E+V     G  G +L+SS   K    K        S +  RYN L+
Sbjct: 142 GLPLLKVEVVDLLSGGAEGEKLSSSALRKLEAEKANQQEGAASKELMRYNSLL 194


>12_02_0796 +
           23224357-23224427,23225714-23225810,23226335-23227146,
           23227593-23227619,23227620-23229624
          Length = 1003

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 15/32 (46%), Positives = 16/32 (50%)
 Frame = -3

Query: 299 PPLLEEIVSRDCPGCSGSRLASSTAXKCXRNK 204
           PP LEEI  +    CSGS LA  T      NK
Sbjct: 414 PPQLEEISCKILKKCSGSPLAIITIASLLTNK 445


>07_03_0676 + 20618677-20618840,20618938-20619502
          Length = 242

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = -3

Query: 287 EEIVSRDCPGCSGSRLASSTAXKCXRNKLEMDTCTKSLD 171
           EE +     GC+ +R+A +T  +C R +   +T +++ D
Sbjct: 8   EEAMRAAGSGCTEARMARTTPLRCRRRRRRRETMSQASD 46


>03_02_0394 -
           8081172-8081330,8082015-8082134,8082223-8082271,
           8083193-8083371,8083583-8083852,8084480-8084631,
           8085694-8085715,8086314-8086430
          Length = 355

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +3

Query: 204 LISXALXSSRRCKPRARAPGAVPTHNLLQEGWSS 305
           L+S A  +S R  PRA   GA+P H + +   SS
Sbjct: 16  LLSTAAEASSRRPPRAPLSGAIPKHEVAKAEASS 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,344,282
Number of Sequences: 37544
Number of extensions: 196236
Number of successful extensions: 639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 639
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1561213104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)