Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N14
(568 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 256 3e-67
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 225 6e-58
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 148 1e-34
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 147 2e-34
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 140 2e-32
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 116 4e-25
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 84 3e-15
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 84 3e-15
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 81 2e-14
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 63 4e-09
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 61 2e-08
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 57 3e-07
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 56 6e-07
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 56 6e-07
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 54 2e-06
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 54 3e-06
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 54 3e-06
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 53 5e-06
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 52 1e-05
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 51 2e-05
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 48 2e-04
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 48 2e-04
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 47 4e-04
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 46 6e-04
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 45 0.001
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 44 0.002
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 43 0.006
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 42 0.013
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 42 0.013
UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1; ... 42 0.013
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 41 0.018
UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces cap... 40 0.031
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 40 0.054
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 39 0.071
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 39 0.094
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 38 0.12
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 38 0.12
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 36 0.50
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 36 0.50
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 33 6.2
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 32 8.1
UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, wh... 32 8.1
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 256 bits (626), Expect = 3e-67
Identities = 121/143 (84%), Positives = 129/143 (90%)
Frame = +3
Query: 66 MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAK 245
MGK RG+RTARK +HRR+Q+W DK++KKAH+GT KANPFGGASHAKGIVLEKVGV AK
Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAK 60
Query: 246 QPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVRF 425
QPNSAIRKCVRVQLIKNGKK+TAFVP DGCLN IE NDE L AGFGRKGHAVGDIPGVRF
Sbjct: 61 QPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRF 120
Query: 426 KVVKVANVSLLALYKEKKERPXS 494
KVVKVANVSLLALYK KKERP S
Sbjct: 121 KVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 225 bits (550), Expect = 6e-58
Identities = 104/142 (73%), Positives = 121/142 (85%)
Frame = +3
Query: 69 GKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQ 248
GKPRG+ +ARK HRR RWA+ +KK +GT +K++PFGG+SHAKGIVLEK+G+ +KQ
Sbjct: 4 GKPRGLNSARKLRVHRRNNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQ 63
Query: 249 PNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVRFK 428
PNSAIRKCVRVQLIKNGKKVTAFVP DGCLN ++ NDE L AGFGRKG A GDIPGVRFK
Sbjct: 64 PNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFK 123
Query: 429 VVKVANVSLLALYKEKKERPXS 494
VVKV+ VSLLAL+KEKKE+P S
Sbjct: 124 VVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 148 bits (358), Expect = 1e-34
Identities = 73/139 (52%), Positives = 98/139 (70%), Gaps = 1/139 (0%)
Frame = +3
Query: 75 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPN 254
P G+ K R++ RW D +K+ +G K +P GA A+GIVLEKVGV A++PN
Sbjct: 7 PYGLFAGGKLKRKRQKFRWNDVTYKRKMLGLVEKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 255 SAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGF-GRKGHAVGDIPGVRFKV 431
+A+RKCVRVQL+KNGK VTAFVP DG LN+I +DE + G +G ++GDIPGVRFKV
Sbjct: 67 AAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKV 126
Query: 432 VKVANVSLLALYKEKKERP 488
+KV VSL A+++ KK++P
Sbjct: 127 IKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 147 bits (356), Expect = 2e-34
Identities = 71/132 (53%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
Frame = +3
Query: 96 RKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCV 275
RK V+ R+ RW+D+++ + + KA+P GA AKGIVLEKVGV AKQPNSAIRKC+
Sbjct: 9 RKLVHDRKLYRWSDRDYARRVLRLDEKADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCI 68
Query: 276 RVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGF-GRKGHAVGDIPGVRFKVVKVANVS 452
R+QLIKNG+++TAF P DG +N I+ +DE G GR G + GDIPGVRF+V KV +VS
Sbjct: 69 RIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVS 128
Query: 453 LLALYKEKKERP 488
L + K+++P
Sbjct: 129 LEEMVAGKRDKP 140
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 140 bits (340), Expect = 2e-32
Identities = 63/95 (66%), Positives = 73/95 (76%)
Frame = +3
Query: 72 KPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQP 251
K G+ RK HRR QRWADK +KK+H G +WK PF G+SHAKGIVLEK+G+ AKQP
Sbjct: 74 KTCGMGAGRKLKTHRRNQRWADKAYKKSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQP 132
Query: 252 NSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXN 356
NSAI KC RVQL+KNGKK+ AFVP DGCLN I+ N
Sbjct: 133 NSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKEN 167
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 116 bits (279), Expect = 4e-25
Identities = 56/100 (56%), Positives = 66/100 (66%)
Frame = -1
Query: 502 YTYDXGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPAXSXSSFXSMWFRQPSR 323
Y YD G SFFS +A ++T T TTL TPG+SP A PL P PA SSF S F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 322 GTNAVTFFPFLMSCTRTHLRMAELGCLAXTPTFSRTMPFA 203
GT AVTF PFL++ T TH +AE GCL P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 83.8 bits (198), Expect = 3e-15
Identities = 39/46 (84%), Positives = 42/46 (91%)
Frame = +3
Query: 357 DEXLXAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPXS 494
DE L AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+P S
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 83.8 bits (198), Expect = 3e-15
Identities = 44/74 (59%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = +3
Query: 270 CVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGF-GRKGHAVGDIPGVRFKVVKVAN 446
CVRVQL KNGK VTAFVP DG LN I +DE + G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 447 VSLLALYKEKKERP 488
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 72.1 bits (169), Expect = 8e-12
Identities = 35/74 (47%), Positives = 49/74 (66%)
Frame = +3
Query: 75 PRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPN 254
P G+ ARK R++ RW+D ++KK +G K +P GA A+GIVLEKVGV A++PN
Sbjct: 7 PLGLYAARKLRRKRQKFRWSDIQYKKRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPN 66
Query: 255 SAIRKCVRVQLIKN 296
+A+RKCV + N
Sbjct: 67 AAVRKCVTPDTLIN 80
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 81.0 bits (191), Expect = 2e-14
Identities = 45/134 (33%), Positives = 69/134 (51%)
Frame = -3
Query: 467 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRX*XXXXXXXXXXXXXTGDECGHFLSVLN 288
++S++R++GYF HLK +S ++T +TF+T+S + C L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSNWIIIFLNEVQAAIIGHERCD-LLPVLN 67
Query: 287 ELYTDAFADGRVGLLSXYTNFLEDDALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVV 108
EL+ DA DGR+ L F + ++LC+R +R+ L VGFL FV P L +V
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLVLFVMPLLVPSVT 127
Query: 107 HVLTRRSYSSGFTH 66
L S ++ H
Sbjct: 128 AELPGSSETTTLAH 141
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 63.3 bits (147), Expect = 4e-09
Identities = 39/115 (33%), Positives = 53/115 (46%)
Frame = -3
Query: 395 VTFTTESRX*XXXXXXXXXXXXXTGDECGHFLSVLNELYTDAFADGRVGLLSXYTNFLED 216
+TF+T+S G E L VLNEL+ DA DGR+ L F +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQH 60
Query: 215 DALCVRCTTERVSLPFRTHVGFLEFFVRPSLFTTVVHVLTRRSYSSGFTHLDSTT 51
++LC+R T +R+ L VGFL FV P L +V L S ++ HL T
Sbjct: 61 NSLCMRGTPKRIGLQGCAQVGFLVLFVMPLLVPSVTAELPGSSETTTLAHLAGAT 115
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 60.9 bits (141), Expect = 2e-08
Identities = 37/86 (43%), Positives = 50/86 (58%)
Frame = +3
Query: 180 NPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXND 359
NPF GA AKG+VL+ + K+PNSA RKCV V+L NGK++TA++P G H
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYIPGIG---HNLQEH 138
Query: 360 EXLXAGFGRKGHAVGDIPGVRFKVVK 437
+ GR D+PGV+ K V+
Sbjct: 139 NIVLCRVGR----CRDVPGVKIKCVR 160
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 56.8 bits (131), Expect = 3e-07
Identities = 35/92 (38%), Positives = 55/92 (59%)
Frame = +3
Query: 168 KWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 347
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++P +G +++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNL 74
Query: 348 EXNDEXLXAGFGRKGHAVGDIPGVRFKVVKVA 443
+ + L G GR V D+PGVR+K+++ A
Sbjct: 75 QEHSIVLVRG-GR----VKDLPGVRYKIIRGA 101
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 56.0 bits (129), Expect = 6e-07
Identities = 34/85 (40%), Positives = 52/85 (61%)
Frame = +3
Query: 183 PFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDE 362
P G KG+VL+ + K+PNSA RKC RV+L NGK+V F+P +G ++++ ++
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNI 118
Query: 363 XLXAGFGRKGHAVGDIPGVRFKVVK 437
L G GR D+PGV+ K+V+
Sbjct: 119 VLVEG-GR----TQDLPGVKLKIVR 138
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 56.0 bits (129), Expect = 6e-07
Identities = 36/94 (38%), Positives = 50/94 (53%)
Frame = +3
Query: 156 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 335
H+ + NP G AKG+VL+ V K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 13 HIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 70
Query: 336 LNHIEXNDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
H + GR + D PGV+ K V+
Sbjct: 71 --HNLQEHNVVLVRVGR----LKDCPGVKLKCVR 98
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 54.0 bits (124), Expect = 2e-06
Identities = 39/137 (28%), Positives = 66/137 (48%)
Frame = -3
Query: 521 QVTYHNVHL*XWSLLFLFVESEERHVGYFYHLKTNSGNVTDGVTFTTESRX*XXXXXXXX 342
Q++Y L W + F+ + R+ G F L+ ++ +++D V+ ++E
Sbjct: 3 QISYQQSALLDWLVFFVSPKCVNRNSGNFDDLEPDTRHISDSVSLSSEVLDENFVVIFCE 62
Query: 341 XXXXXTGDECGHFLSVLNELYTDAFADGRVGLLSXYTNFLEDDALCVRCTTERVSLPFRT 162
+ +E HFL VL EL++DA ++G V LL + DDA C +E + L R
Sbjct: 63 SKTTVSWNESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR- 121
Query: 161 HVGFLEFFVRPSLFTTV 111
H F + PSL ++V
Sbjct: 122 HC-FNVSCIVPSLLSSV 137
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 53.6 bits (123), Expect = 3e-06
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +3
Query: 156 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 335
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG- 113
Query: 336 LNHIEXNDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
H + GR + D+PGV+ K V+
Sbjct: 114 --HNLQEHNIVLCRVGR----LQDVPGVKLKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 53.6 bits (123), Expect = 3e-06
Identities = 34/94 (36%), Positives = 50/94 (53%)
Frame = +3
Query: 156 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 335
H+ T+ P G AKG+VL+ + K+PNSA RKCV V+L GK++ A++P G
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYIPGIG- 99
Query: 336 LNHIEXNDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
H + GR + D+PGV+ K V+
Sbjct: 100 --HNLQEHNIVLCRVGR----LQDVPGVKLKAVR 127
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 52.8 bits (121), Expect = 5e-06
Identities = 30/79 (37%), Positives = 52/79 (65%)
Frame = +3
Query: 207 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGR 386
+G++L + + K+PNSA+RKC RV+L NGK ++A +P +G ++++ + L G GR
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR 145
Query: 387 KGHAVGDIPGVRFKVVKVA 443
V D+PGV++ +V+ A
Sbjct: 146 ----VQDVPGVKYHLVRGA 160
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 51.6 bits (118), Expect = 1e-05
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Frame = +3
Query: 33 PSVADWCRAIQMGKPRGIRT-ARKHVNHRREQRWADKEFKKAHMGTKWKANP--FGGASH 203
P+ A + R + M R + R + R + ++ + A TK K++ G
Sbjct: 21 PAKAAFARPVAMPVFRPATSFGRGFASSSRCEATINQIMRGARKSTKRKSSVPLLDGCFQ 80
Query: 204 AKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFG 383
K + + ++PNSA+RK RV+L NG+ TA++P +G ++++ + L G G
Sbjct: 81 KKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRGGG 137
Query: 384 RKGHAVGDIPGVRFKVVK 437
K D+PGVR+K+V+
Sbjct: 138 AK-----DLPGVRYKIVR 150
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 51.2 bits (117), Expect = 2e-05
Identities = 34/94 (36%), Positives = 48/94 (51%)
Frame = +3
Query: 156 HMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGC 335
H+ + P G KG+VL+ + K+PNSA RKCV V+L NGK++ A++P G
Sbjct: 60 HIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYIPGIG- 117
Query: 336 LNHIEXNDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
H + GR V D PGV+ K V+
Sbjct: 118 --HNLQEHNIVLCRVGR----VQDCPGVKIKCVR 145
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 47.6 bits (108), Expect = 2e-04
Identities = 21/27 (77%), Positives = 23/27 (85%)
Frame = +3
Query: 357 DEXLXAGFGRKGHAVGDIPGVRFKVVK 437
DE L +GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 47.6 bits (108), Expect = 2e-04
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +3
Query: 168 KWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHI 347
K K+ +GI L V K+PNSA+RK RV+L G +VTA++P G +++
Sbjct: 18 KTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNL 74
Query: 348 EXNDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
+ + L G GR V D+PGVR+ +V+
Sbjct: 75 QEHAVVLVRG-GR----VKDLPGVRYHIVR 99
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 46.8 bits (106), Expect = 4e-04
Identities = 31/88 (35%), Positives = 43/88 (48%)
Frame = +3
Query: 174 KANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEX 353
K P G KG+VL K+PNSA RKC RV+L G++ F+P +G H
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFIPGEG---HTLQ 103
Query: 354 NDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
+ + GR D+PGV+ VV+
Sbjct: 104 EHQIVLVEGGR----TQDLPGVKLTVVR 127
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 46.0 bits (104), Expect = 6e-04
Identities = 28/97 (28%), Positives = 53/97 (54%)
Frame = +3
Query: 147 KKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 326
K + + K ++ F KG+ ++ K+PNSA+RK +++L KN K++ A++P
Sbjct: 9 KHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEILAYIPG 67
Query: 327 DGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVRFKVVK 437
+G H + + GR V D+PG+++KV++
Sbjct: 68 EG---HALQDHNFVLIKKGR----VQDLPGIKYKVIR 97
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 44.8 bits (101), Expect = 0.001
Identities = 29/79 (36%), Positives = 44/79 (55%)
Frame = +3
Query: 207 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGR 386
KG+VL + + K+PNSA RK RV+L NG V+A++P +G H + GR
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG---HDAQEHSIVYVRGGR 114
Query: 387 KGHAVGDIPGVRFKVVKVA 443
D+PGV++ V++ A
Sbjct: 115 ----CQDLPGVKYHVIRGA 129
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 44.0 bits (99), Expect = 0.002
Identities = 27/66 (40%), Positives = 40/66 (60%)
Frame = +3
Query: 192 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLX 371
G SH KGIVL+ V K+PNS RKC V+L G +V A++P G ++++ + + L
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLV 128
Query: 372 AGFGRK 389
G GR+
Sbjct: 129 KG-GRR 133
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 42.7 bits (96), Expect = 0.006
Identities = 29/82 (35%), Positives = 45/82 (54%)
Frame = +3
Query: 192 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLX 371
G+ +G+ V K+PNSA+RK RV+L G+ VTA++P G ++ + + L
Sbjct: 47 GSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLL 103
Query: 372 AGFGRKGHAVGDIPGVRFKVVK 437
G GR D PGV++ VV+
Sbjct: 104 RG-GR----AQDCPGVQYHVVR 120
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 41.5 bits (93), Expect = 0.013
Identities = 25/77 (32%), Positives = 45/77 (58%)
Frame = +3
Query: 207 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGR 386
KG+ ++ K+PNSA RKC ++L NGK ++A++P G ++ + + G GR
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR 91
Query: 387 KGHAVGDIPGVRFKVVK 437
V D PG+++K+++
Sbjct: 92 ----VQDCPGIKYKIIR 104
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 41.5 bits (93), Expect = 0.013
Identities = 26/64 (40%), Positives = 37/64 (57%)
Frame = +3
Query: 243 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVR 422
K+PNSA+RK ++ L N K V A+VP + + I N L KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 423 FKVV 434
+KV+
Sbjct: 94 YKVI 97
>UniRef50_Q2H267 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 141
Score = 41.5 bits (93), Expect = 0.013
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Frame = +3
Query: 225 KVGVXA-KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAV 401
+VG+ K+PNS RK RV+L GK +TA++P +G ++I+ + L G GR
Sbjct: 49 RVGITKPKKPNSGERKTARVRL-STGKVITAYIPGEG--HNIQQHSVVLVRG-GRS---- 100
Query: 402 GDIPGVRFKVVKVA 443
D PGVR+ +V+ A
Sbjct: 101 QDCPGVRYHLVRGA 114
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 41.1 bits (92), Expect = 0.018
Identities = 29/87 (33%), Positives = 47/87 (54%)
Frame = +3
Query: 174 KANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEX 353
++NPF G+ L V K+PNSA+RK V+L N + V A++P G + ++
Sbjct: 25 ESNPF-----KSGVCLVVKTVTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKE 76
Query: 354 NDEXLXAGFGRKGHAVGDIPGVRFKVV 434
+D L +G V D+PGV++ +V
Sbjct: 77 HDRVLV-----RGGQVPDLPGVKYHIV 98
>UniRef50_A6QU96 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 208
Score = 40.3 bits (90), Expect = 0.031
Identities = 30/93 (32%), Positives = 45/93 (48%)
Frame = +3
Query: 147 KKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPR 326
+K K + G KG+ L+ K+PNS RK R++L NG VT ++P
Sbjct: 90 RKGKRARKTTSPALVGRPQMKGVCLKTGITKPKKPNSGERKTARIRL-TNGAVVTGYIPG 148
Query: 327 DGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVRF 425
+G ++I+ + L G GR D PGVR+
Sbjct: 149 EG--HNIQQHSVVLIRG-GR----AQDCPGVRY 174
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 39.5 bits (88), Expect = 0.054
Identities = 34/127 (26%), Positives = 61/127 (48%)
Frame = +3
Query: 57 AIQMGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGV 236
A ++ + G T + + H RE++ H + +A G +G+ L
Sbjct: 55 AFRLPQSSGFATMNQLIRHGREEK---------HRSDRKRA--LGKCPQKQGVCLRVSTR 103
Query: 237 XAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAVGDIPG 416
K+PNSA+ K +V+L N V A++P +G ++++ + L G GR V D+PG
Sbjct: 104 TPKKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPG 155
Query: 417 VRFKVVK 437
V+F ++
Sbjct: 156 VKFHCIR 162
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 39.1 bits (87), Expect = 0.071
Identities = 34/107 (31%), Positives = 52/107 (48%)
Frame = +3
Query: 165 TKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 344
TK K+ KGI ++ K+PNSA RK +V L NGK + ++ +G +
Sbjct: 17 TKSKSIALIQCPQKKGICMKVYTTSPKKPNSAERKVAKVNL-TNGKSIIGYISGEG--HT 73
Query: 345 IEXNDEXLXAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 485
++ + L G GR V D+PGV++ V+ L A+ KK R
Sbjct: 74 LQEHSLVLVRG-GR----VKDLPGVQYHFVR-GVYDLHAVGTRKKSR 114
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 38.7 bits (86), Expect = 0.094
Identities = 25/76 (32%), Positives = 43/76 (56%)
Frame = +3
Query: 210 GIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRK 389
G+ L K+PNSA+RK +V+L N + A++P +G ++++ + L G GR
Sbjct: 32 GVCLRVSTRTPKKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR- 86
Query: 390 GHAVGDIPGVRFKVVK 437
V D+PGV+F ++
Sbjct: 87 ---VKDLPGVKFHCIR 99
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 38.3 bits (85), Expect = 0.12
Identities = 27/82 (32%), Positives = 42/82 (51%)
Frame = +3
Query: 192 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLX 371
G KG+ + V ++PNS +RK RV+L G+ VT VP +G +++ + L
Sbjct: 127 GCPQKKGVCVTIRVVTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLV 183
Query: 372 AGFGRKGHAVGDIPGVRFKVVK 437
G GR D+ G +KVV+
Sbjct: 184 RG-GR----CQDVSGCHYKVVR 200
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 38.3 bits (85), Expect = 0.12
Identities = 25/82 (30%), Positives = 45/82 (54%)
Frame = +3
Query: 192 GASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLX 371
G KG+ ++ V K+PNSA RK +++L + + A++P G ++++ L
Sbjct: 26 GCPQKKGVCVKLRIVKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLV 82
Query: 372 AGFGRKGHAVGDIPGVRFKVVK 437
+G GR D+PGVR+ ++K
Sbjct: 83 SG-GR----APDLPGVRYTLIK 99
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 36.3 bits (80), Expect = 0.50
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +3
Query: 243 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVR 422
K+PNSA+RK +V+L N V +P +G ++++ + L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 423 FKVVKVANVSLLALYKEKKER 485
+K V+ + L + K K R
Sbjct: 98 YKAVR-GVLDLAGVQKRKTAR 117
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 36.3 bits (80), Expect = 0.50
Identities = 24/76 (31%), Positives = 39/76 (51%)
Frame = +3
Query: 207 KGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGR 386
+G + + + K+PNSA RK ++L KN KK+ A++P G + + L G
Sbjct: 28 EGFLCSIISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNT 84
Query: 387 KGHAVGDIPGVRFKVV 434
+ D+PGV K+V
Sbjct: 85 R-----DLPGVNHKIV 95
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 32.7 bits (71), Expect = 6.2
Identities = 31/108 (28%), Positives = 50/108 (46%)
Frame = +3
Query: 162 GTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLN 341
G K +NP K I L+ + + K+PNSA R+ +V+ +K +T +P G +
Sbjct: 22 GKKLNSNP-----QRKVICLKVLTISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKH 74
Query: 342 HIEXNDEXLXAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKER 485
+++ + L G GR D+ GV K V+ LL + K R
Sbjct: 75 NLQQHSTVLICG-GRS----KDLIGVHLKAVR-GKFDLLGVNGRKSSR 116
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 32.3 bits (70), Expect = 8.1
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 243 KQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEXNDEXLXAGFGRKGHAVGDIPGVR 422
K+ NSA+RK RV+L +G ++T ++P G ++ + + L G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 423 FKVVK 437
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_A0CUX9 Cluster: Chromosome undetermined scaffold_29, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_29,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 107
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 99 KHVNHRREQ--RWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVXAKQPNSAIRKC 272
K H+R Q W K+F K + T+ + G H KG+++ K G + N + +
Sbjct: 26 KITKHKRVQGRAWRRKQFNKRKVQTQLQKTLVGQQIHLKGVLVHKKGPNWHKGNKQLLEK 85
Query: 273 VRVQLIK 293
+++L++
Sbjct: 86 EKIELVQ 92
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,346,299
Number of Sequences: 1657284
Number of extensions: 12021404
Number of successful extensions: 26778
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 26169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26753
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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