Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_N13
         (533 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.079
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 0.079
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -1

Query: 392 FIHHST*QSHTLKGECRHXLLHHWPFLFESS 300
           ++ H     HT + +C H LL H P L + S
Sbjct: 343 YVRHKNTPYHTPEPDCIHELLGHMPLLADPS 373


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 13/56 (23%), Positives = 28/56 (50%)
 Frame = -2

Query: 379 QLDNHTL*RVNADIXCCTIGLFSLNPLNVYNKLFPIHLHHFANLLAFVVSTYNMNF 212
           +L+N++L  +N  +    +GL+ LN  + ++    I      N + F V+ +  +F
Sbjct: 320 KLENYSLQLINHRVVFTAMGLYVLNMEHFFSVKCSIQSESLLNDILFPVAGFISDF 375



 Score = 21.8 bits (44), Expect = 3.9
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -2

Query: 283 LFPIHLHHFANLLAFVVSTYNMNFIVFPNRHGFXIEF 173
           L+ +++ HF ++   + S   +N I+FP   GF  +F
Sbjct: 340 LYVLNMEHFFSVKCSIQSESLLNDILFPVA-GFISDF 375


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 418 EQRADWLHLAKTRVNTPRKLPQPW 489
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 319 GQWCNXICRHSP 354
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 418 EQRADWLHLAKTRVNTPRKLPQPW 489
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 319 GQWCNXICRHSP 354
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 418 EQRADWLHLAKTRVNTPRKLPQPW 489
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 319 GQWCNXICRHSP 354
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 418 EQRADWLHLAKTRVNTPRKLPQPW 489
           ++ A  +H    R+  P+K+P P+
Sbjct: 645 DEAASDVHQTHMRIRPPKKIPTPY 668



 Score = 21.4 bits (43), Expect = 5.2
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 319 GQWCNXICRHSP 354
           G W N I RHSP
Sbjct: 266 GWWENYISRHSP 277


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,092
Number of Sequences: 336
Number of extensions: 2484
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12992348
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)