Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N13
(533 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26 pro... 139 7e-33
L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26 pro... 139 7e-33
CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein. 139 7e-33
BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein. 139 7e-33
BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-l... 139 7e-33
BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-l... 139 7e-33
AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26 p... 139 7e-33
Y00414-1|CAA68472.1| 524|Homo sapiens protein ( Human mRNA for ... 30 5.9
X05290-1|CAA28908.1| 497|Homo sapiens protein ( Human mRNA for ... 30 5.9
M17589-1|AAA61179.1| 528|Homo sapiens TH protein. 30 5.9
>X69392-1|CAA49189.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>L07287-1|AAA60279.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>CR456828-1|CAG33109.1| 145|Homo sapiens RPL26 protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC071664-1|AAH71664.1| 145|Homo sapiens RPL26 protein protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>BC070192-1|AAH70192.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>BC017360-1|AAH17360.1| 145|Homo sapiens ribosomal protein L26-like
1 protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 58.8 bits (136), Expect = 1e-08
Identities = 26/34 (76%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSH+RR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHVRRKIMSSPL 34
>AB061829-1|BAB79467.1| 145|Homo sapiens ribosomal protein L26
protein.
Length = 145
Score = 139 bits (336), Expect = 7e-33
Identities = 66/97 (68%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIRKDDEV VVRGHYKGQQ+GKV+QVYRKK+V+YIER+QREKANG
Sbjct: 33 PLSKELRQKYNVRSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANG 92
Query: 329 ATXYVGIHPSKCVIVKLN-DE*RPQSNPRSQSKGQTG 436
T +VGIHPSK VI +L D+ R + R Q G
Sbjct: 93 TTVHVGIHPSKVVITRLKLDKDRKKILERKAKSRQVG 129
Score = 59.3 bits (137), Expect = 8e-09
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MKFN VTS R KNRKRHF+APSHIRR +MSSPL
Sbjct: 1 MKFNPFVTSDRSKNRKRHFNAPSHIRRKIMSSPL 34
>Y00414-1|CAA68472.1| 524|Homo sapiens protein ( Human mRNA for
tyrosine hydroxylase type 3. ).
Length = 524
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 455 LVFAKCSQSALCSAIEDCFAVFIHHST*QSHTLKGECRHXLLHHWPFLFESSQCIQQTFS 276
L+ A+ ++L + C +I H++ H+ + +C H LL H P L + +TF
Sbjct: 320 LLSARDFLASLAFRVFQC-TQYIRHASSPMHSPEPDCCHELLGHVPMLAD------RTF- 371
Query: 275 DTPASLCQPVGLCSVHV-QHELHRLSE*AW 189
A Q +GL S+ E+ +LS +W
Sbjct: 372 ---AQFSQDIGLASLGASDEEIEKLSTLSW 398
>X05290-1|CAA28908.1| 497|Homo sapiens protein ( Human mRNA for
tyrosine hydroxylase (HTH-1). ).
Length = 497
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 455 LVFAKCSQSALCSAIEDCFAVFIHHST*QSHTLKGECRHXLLHHWPFLFESSQCIQQTFS 276
L+ A+ ++L + C +I H++ H+ + +C H LL H P L + +TF
Sbjct: 293 LLSARDFLASLAFRVFQC-TQYIRHASSPMHSPEPDCCHELLGHVPMLAD------RTF- 344
Query: 275 DTPASLCQPVGLCSVHV-QHELHRLSE*AW 189
A Q +GL S+ E+ +LS +W
Sbjct: 345 ---AQFSQDIGLASLGASDEEIEKLSTLSW 371
>M17589-1|AAA61179.1| 528|Homo sapiens TH protein.
Length = 528
Score = 29.9 bits (64), Expect = 5.9
Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 455 LVFAKCSQSALCSAIEDCFAVFIHHST*QSHTLKGECRHXLLHHWPFLFESSQCIQQTFS 276
L+ A+ ++L + C +I H++ H+ + +C H LL H P L + +TF
Sbjct: 324 LLSARDFLASLAFRVFQC-TQYIRHASSPMHSPEPDCCHELLGHVPMLAD------RTF- 375
Query: 275 DTPASLCQPVGLCSVHV-QHELHRLSE*AW 189
A Q +GL S+ E+ +LS +W
Sbjct: 376 ---AQFSQDIGLASLGASDEEIEKLSTLSW 402
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,454,816
Number of Sequences: 237096
Number of extensions: 1526581
Number of successful extensions: 3732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3525
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3732
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5216942984
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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