Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N13
(533 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071133-1|AAL48755.1| 149|Drosophila melanogaster RE17611p pro... 131 7e-31
AE014296-3077|AAF49215.1| 149|Drosophila melanogaster CG6846-PA... 131 7e-31
BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p pro... 31 0.99
AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA... 31 0.99
BT001418-1|AAN71173.1| 555|Drosophila melanogaster GH12537p pro... 29 5.3
AE014296-180|AAF47444.1| 555|Drosophila melanogaster CG9122-PA ... 29 5.3
AY061521-1|AAL29069.1| 350|Drosophila melanogaster LD47568p pro... 28 7.0
AJ620303-1|CAF04330.1| 350|Drosophila melanogaster THO complex ... 28 7.0
AE014296-2112|AAF49944.1| 350|Drosophila melanogaster CG5632-PA... 28 7.0
BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p pro... 28 9.2
AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-P... 28 9.2
>AY071133-1|AAL48755.1| 149|Drosophila melanogaster RE17611p
protein.
Length = 149
Score = 131 bits (316), Expect = 7e-31
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIR+DDEV V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG
Sbjct: 33 PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANG 92
Query: 329 ATXYVGIHPSKCVIVKL 379
YVGIHPSK +IVKL
Sbjct: 93 TNVYVGIHPSKVLIVKL 109
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MK N V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1 MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 384 MNKDRKAILDRRAKGRLAALGKDKGKY 464
++KDRKAIL+RR KGRLAALGKDKGKY
Sbjct: 111 LDKDRKAILERRGKGRLAALGKDKGKY 137
>AE014296-3077|AAF49215.1| 149|Drosophila melanogaster CG6846-PA
protein.
Length = 149
Score = 131 bits (316), Expect = 7e-31
Identities = 58/77 (75%), Positives = 67/77 (87%)
Frame = +2
Query: 149 PCSKELRQKFNXKSMPIRKDDEVHVVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKANG 328
P SKELRQK+N +SMPIR+DDEV V+RGH+KG QVGKV+Q YRKKFVVY+E+IQRE ANG
Sbjct: 33 PLSKELRQKYNVRSMPIRRDDEVQVIRGHFKGNQVGKVVQAYRKKFVVYVEKIQRENANG 92
Query: 329 ATXYVGIHPSKCVIVKL 379
YVGIHPSK +IVKL
Sbjct: 93 TNVYVGIHPSKVLIVKL 109
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/34 (79%), Positives = 29/34 (85%)
Frame = +1
Query: 52 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPL 153
MK N V+SSRRKNRKRHF APSHIRR LMS+PL
Sbjct: 1 MKQNPFVSSSRRKNRKRHFQAPSHIRRRLMSAPL 34
Score = 52.4 bits (120), Expect = 4e-07
Identities = 23/27 (85%), Positives = 26/27 (96%)
Frame = +3
Query: 384 MNKDRKAILDRRAKGRLAALGKDKGKY 464
++KDRKAIL+RR KGRLAALGKDKGKY
Sbjct: 111 LDKDRKAILERRGKGRLAALGKDKGKY 137
>BT003208-1|AAO24963.1| 478|Drosophila melanogaster SD23764p
protein.
Length = 478
Score = 31.1 bits (67), Expect = 0.99
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 206 DDEVHVVRGHYKGQQ-VGKVMQVYRKKFVVY 295
D V++ RGHY+G +GK+ V+R F+ +
Sbjct: 98 DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128
>AE013599-1621|AAF58436.2| 478|Drosophila melanogaster CG3884-PA,
isoform A protein.
Length = 478
Score = 31.1 bits (67), Expect = 0.99
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +2
Query: 206 DDEVHVVRGHYKGQQ-VGKVMQVYRKKFVVY 295
D V++ RGHY+G +GK+ V+R F+ +
Sbjct: 98 DQPVYIGRGHYEGHLIIGKISSVHRALFIAF 128
>BT001418-1|AAN71173.1| 555|Drosophila melanogaster GH12537p
protein.
Length = 555
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 392 FIHHST*QSHTLKGECRHXLLHHWPFLFESS 300
+I HS+ +T + +C H LL H P L SS
Sbjct: 324 YIRHSSDPFYTPEPDCCHELLGHMPLLANSS 354
>AE014296-180|AAF47444.1| 555|Drosophila melanogaster CG9122-PA
protein.
Length = 555
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 392 FIHHST*QSHTLKGECRHXLLHHWPFLFESS 300
+I HS+ +T + +C H LL H P L SS
Sbjct: 324 YIRHSSDPFYTPEPDCCHELLGHMPLLANSS 354
>AY061521-1|AAL29069.1| 350|Drosophila melanogaster LD47568p
protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 458 TLVFAKCSQSALCSAIEDCFAVFIHHST*QSHTLKG 351
T VF+ + LC ++DC + H+ QS+TL G
Sbjct: 238 TCVFSFPGRVHLCDFVDDCVLIGGEHNHVQSYTLNG 273
>AJ620303-1|CAF04330.1| 350|Drosophila melanogaster THO complex 6
protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 458 TLVFAKCSQSALCSAIEDCFAVFIHHST*QSHTLKG 351
T VF+ + LC ++DC + H+ QS+TL G
Sbjct: 238 TCVFSFPGRVHLCDFVDDCVLIGGEHNHVQSYTLNG 273
>AE014296-2112|AAF49944.1| 350|Drosophila melanogaster CG5632-PA
protein.
Length = 350
Score = 28.3 bits (60), Expect = 7.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 458 TLVFAKCSQSALCSAIEDCFAVFIHHST*QSHTLKG 351
T VF+ + LC ++DC + H+ QS+TL G
Sbjct: 238 TCVFSFPGRVHLCDFVDDCVLIGGEHNHVQSYTLNG 273
>BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p
protein.
Length = 294
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 221 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKA---NGATXYVGIHPSKCVIVKLNDE* 391
+V+G Y Q + +Q +RK F E + + NGA +G P + + K ++
Sbjct: 103 LVKGRY--QDNFEFLQWFRKFFDANYESREYDPVIARNGAMLGLGSPPMEAKLRKSVNKS 160
Query: 392 RPQSNPRSQSKGQTG-CTWQRQG*IHRGN 475
PQ+ P +S QT T + + +++ N
Sbjct: 161 NPQTKPTEESSAQTDRATTEPKNQVYKSN 189
>AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-PA
protein.
Length = 294
Score = 27.9 bits (59), Expect = 9.2
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Frame = +2
Query: 221 VVRGHYKGQQVGKVMQVYRKKFVVYIERIQREKA---NGATXYVGIHPSKCVIVKLNDE* 391
+V+G Y Q + +Q +RK F E + + NGA +G P + + K ++
Sbjct: 103 LVKGRY--QDNFEFLQWFRKFFDANYESREYDPVIARNGAMLGLGSPPMEAKLRKSVNKS 160
Query: 392 RPQSNPRSQSKGQTG-CTWQRQG*IHRGN 475
PQ+ P +S QT T + + +++ N
Sbjct: 161 NPQTKPTEESSAQTDRATTEPKNQVYKSN 189
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,055,093
Number of Sequences: 53049
Number of extensions: 490629
Number of successful extensions: 1180
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1180
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2012211456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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