Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_N13
         (533 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    27   0.12 
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   3.4  
DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated...    22   3.4  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              21   6.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.0  
AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding prote...    21   7.9  
AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding prote...    21   7.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.9  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 27.1 bits (57), Expect = 0.12
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = -1

Query: 392 FIHHST*QSHTLKGECRHXLLHHWPFLFESSQCIQQTFSDTPASLCQPVGLCSVHV-QHE 216
           +I H     HT + +C H LL H P L + S           A   Q +GL S+     E
Sbjct: 321 YIRHIKSPYHTPEPDCIHELLGHMPLLADPSF----------AQFSQEIGLASLGASDEE 370

Query: 215 LHRLSE*AW 189
           + +LS   W
Sbjct: 371 IEKLSTIYW 379


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = -1

Query: 326 HWPFLFESSQCIQQTFS 276
           H+P++F  + CI Q+F+
Sbjct: 117 HFPYVFGEAFCIIQSFA 133


>DQ667195-1|ABG75747.1|  469|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 469

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -2

Query: 313 SLNPLNVYNKLF 278
           S+NP+NVY K +
Sbjct: 35  SINPINVYTKAY 46


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = +3

Query: 90  KQEEAFQCSFTYKASVDVLS 149
           K  + FQC   YK   D+L+
Sbjct: 115 KISKIFQCFMKYKTITDILN 134


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 6/17 (35%), Positives = 9/17 (52%)
 Frame = +1

Query: 328 CNXICRHSPFKVCDCQV 378
           C  +C    F  CDC++
Sbjct: 743 CFALCHCCDFDACDCEM 759


>AF393496-1|AAL60421.1|  146|Apis mellifera odorant binding protein
           ASP6 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 480 WQFPRCIY 457
           WQF +CIY
Sbjct: 129 WQFGKCIY 136


>AF339140-1|AAK01304.1|  120|Apis mellifera odorant binding protein
           protein.
          Length = 120

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = -3

Query: 480 WQFPRCIY 457
           WQF +CIY
Sbjct: 103 WQFGKCIY 110


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -3

Query: 411 RGLLCGLYSSFNLTITHFE 355
           R +L   Y+ FNLTI +++
Sbjct: 287 RMILTEAYTEFNLTIKYYK 305


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,423
Number of Sequences: 438
Number of extensions: 2752
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15090993
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)