Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N11
(487 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34 pro... 80 4e-15
CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein. 76 8e-14
CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein. 76 8e-14
BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34 p... 76 8e-14
BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34 p... 76 8e-14
BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34 p... 76 8e-14
AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34 p... 76 8e-14
AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34 p... 44 4e-04
BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein. 31 2.8
BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein. 31 2.8
AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein. 31 2.8
AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein. 31 2.8
AK093052-1|BAC04036.1| 279|Homo sapiens protein ( Homo sapiens ... 30 5.0
>L38941-1|AAC41916.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 80.2 bits (189), Expect = 4e-15
Identities = 41/72 (56%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C KLRG++P RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGKLRGVRPVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQK-IVKVL 351
LIEEQK IVKVL
Sbjct: 96 LIEEQKIIVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542242-1|CAG47038.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 75.8 bits (178), Expect = 8e-14
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQKI-VKVL 351
LIEEQKI VKVL
Sbjct: 96 LIEEQKIVVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>CR542232-1|CAG47028.1| 117|Homo sapiens RPL34 protein.
Length = 117
Score = 75.8 bits (178), Expect = 8e-14
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQKI-VKVL 351
LIEEQKI VKVL
Sbjct: 96 LIEEQKIVVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC106009-1|AAI06010.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 75.8 bits (178), Expect = 8e-14
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQKI-VKVL 351
LIEEQKI VKVL
Sbjct: 96 LIEEQKIVVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC070208-1|AAH70208.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 75.8 bits (178), Expect = 8e-14
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQKI-VKVL 351
LIEEQKI VKVL
Sbjct: 96 LIEEQKIVVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>BC001773-1|AAH01773.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 75.8 bits (178), Expect = 8e-14
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQKI-VKVL 351
LIEEQKI VKVL
Sbjct: 96 LIEEQKIVVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB061832-1|BAB79470.1| 117|Homo sapiens ribosomal protein L34
protein.
Length = 117
Score = 75.8 bits (178), Expect = 8e-14
Identities = 39/72 (54%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +1
Query: 139 MSKSPRRSQGCGQCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAF 318
+ K+P+ + CG C +LRG++ RP RL KK V R YGG +C KCV+ RI RAF
Sbjct: 38 VGKAPKSA--CGVCPGRLRGVRAVRPKVLMRLSKTKKHVSRAYGGSMCAKCVRDRIKRAF 95
Query: 319 LIEEQKI-VKVL 351
LIEEQKI VKVL
Sbjct: 96 LIEEQKIVVKVL 107
Score = 49.2 bits (112), Expect = 8e-06
Identities = 24/43 (55%), Positives = 30/43 (69%)
Frame = +2
Query: 38 MVQRLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
MVQRLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 MVQRLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 43
>AB007181-1|BAA25840.1| 45|Homo sapiens ribosomal protein L34
protein.
Length = 45
Score = 43.6 bits (98), Expect = 4e-04
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 47 RLTFRRRLSYNTKSNQRRIVRTPGWPLGLSVCQKAQEDPK 166
RLT+RRRLSYNT SN+ R+ RTPG + +K + PK
Sbjct: 1 RLTYRRRLSYNTASNKTRLSRTPGNRIVYLYTKKVGKAPK 40
>BC037582-1|AAH37582.1| 349|Homo sapiens ATXN7L2 protein protein.
Length = 349
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 395 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 267
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>BC036849-1|AAH36849.1| 580|Homo sapiens ataxin 7-like 2 protein.
Length = 580
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 395 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 267
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AL355145-2|CAI22938.1| 349|Homo sapiens ataxin 7-like 2 protein.
Length = 349
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 395 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 267
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 40 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 84
>AL355145-1|CAI22937.1| 722|Homo sapiens ataxin 7-like 2 protein.
Length = 722
Score = 30.7 bits (66), Expect = 2.8
Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
Frame = -3
Query: 395 FVAFFADLVLACCAL--RTFTIFCSSIKKALTMRCLTHLWQRTPP 267
F F + LV C + R FCS++ L TH+W++ PP
Sbjct: 413 FCTFGSRLVSPGCYVFSRRLDRFCSALSSMLERHLSTHMWKKIPP 457
>AK093052-1|BAC04036.1| 279|Homo sapiens protein ( Homo sapiens
cDNA FLJ35733 fis, clone TESTI2003277, weakly similar to
ANTER-SPECIFIC PROLINE-RICH PROTEIN APG PRECURSOR. ).
Length = 279
Score = 29.9 bits (64), Expect = 5.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 141 VKKPKKIPRLWSMQEQTPWYPAS*TC*TFPSLLP*ENSETCLWWC 275
++ P + P W ++ + PW S C P+ S TC WWC
Sbjct: 64 LRGPGRAPTCWPLRVRMPWRAGSRPC-RVPA------STTCGWWC 101
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,010,307
Number of Sequences: 237096
Number of extensions: 1102652
Number of successful extensions: 2112
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2103
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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