Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N10
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 238 4e-64
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 157 1e-39
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 155 4e-39
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 141 7e-35
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 128 5e-31
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 124 9e-30
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 108 6e-25
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 106 3e-24
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 83 3e-17
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 75 1e-14
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 74 2e-14
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 73 3e-14
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 71 1e-13
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 71 2e-13
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 69 6e-13
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 65 1e-11
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 63 4e-11
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 59 5e-10
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 52 5e-08
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 44 3e-05
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 43 4e-05
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 39 5e-04
SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr 2... 28 1.4
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 27 2.4
SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces po... 27 3.1
SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomy... 27 3.1
SPBC354.01 |gtp1|SPBC649.06|GTP binding protein Gtp1|Schizosacch... 26 4.1
SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces ... 26 4.1
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 26 5.5
SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit ... 26 5.5
SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces po... 25 7.2
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 9.5
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 25 9.5
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 9.5
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 238 bits (583), Expect = 4e-64
Identities = 112/140 (80%), Positives = 126/140 (90%)
Frame = +3
Query: 231 REDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQ 410
+EDEYDYLFK VLIGDSGVGKS+LL RFTRNEFN+ SKSTIGVEFATR+I +D K IKAQ
Sbjct: 3 QEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Query: 411 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVG 590
IWDTAGQERYRAITSAYYRGAVGAL+VYDI K S+ NV RWL+ELR+HAD NI+IMLVG
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVG 122
Query: 591 NKSDLRHLRSIPTEEAKAFA 650
NK+DL HLR++ TEEA+AFA
Sbjct: 123 NKTDLLHLRAVSTEEAQAFA 142
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 157 bits (382), Expect = 1e-39
Identities = 71/137 (51%), Positives = 95/137 (69%)
Frame = +3
Query: 243 YDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDT 422
YDYL K++LIGDSGVGKS LL RF+ + F +TIG++F R+I +DGK IK QIWDT
Sbjct: 6 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 65
Query: 423 AGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSD 602
AGQER+R IT+AYYRGA+G LL+YD+ S+ NV W + HA +N+ +L+GNK D
Sbjct: 66 AGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCD 125
Query: 603 LRHLRSIPTEEAKAFAE 653
R + E+ +A A+
Sbjct: 126 CEDQRQVSFEQGQALAD 142
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 155 bits (377), Expect = 4e-39
Identities = 73/138 (52%), Positives = 100/138 (72%)
Frame = +3
Query: 240 EYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWD 419
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R+ ++GKT+K QIWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 420 TAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKS 599
TAGQER+R ITS+YYRGA G ++VYD+ S+ NV++WL+E+ +A + + +LVGNKS
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLLVGNKS 123
Query: 600 DLRHLRSIPTEEAKAFAE 653
D+ + + AK FA+
Sbjct: 124 DMVDKKVVEYSVAKEFAD 141
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 141 bits (342), Expect = 7e-35
Identities = 67/142 (47%), Positives = 94/142 (66%), Gaps = 4/142 (2%)
Frame = +3
Query: 234 EDEYDYLFKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXV----DGKTI 401
++ YDYL K+VL G SG GKS LL RF +N+++ T+G++FA+R I V K I
Sbjct: 3 KESYDYLVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRI 62
Query: 402 KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIM 581
K QIWDTAGQE++R++ YYRGA GA+LVYD+ S+ + WL ++R A I ++
Sbjct: 63 KLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAPSTICVV 122
Query: 582 LVGNKSDLRHLRSIPTEEAKAF 647
L G+KSDL++ R + TEEA F
Sbjct: 123 LAGSKSDLQNQRQVSTEEAAEF 144
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 128 bits (310), Expect = 5e-31
Identities = 52/133 (39%), Positives = 95/133 (71%)
Frame = +3
Query: 255 FKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 434
FK+V +G+ VGK+SL++RF ++F+ ++TIG++F ++++ ++ +T++ Q+WDTAGQE
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQE 71
Query: 435 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSDLRHL 614
R+R++ +Y R + A++VYDI H S+ N E+W+ ++R +++I+LVGNK+DL
Sbjct: 72 RFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERGDDVIIVLVGNKTDLADK 131
Query: 615 RSIPTEEAKAFAE 653
R + EE + A+
Sbjct: 132 RQVTQEEGEKKAK 144
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 124 bits (300), Expect = 9e-30
Identities = 60/133 (45%), Positives = 92/133 (69%), Gaps = 2/133 (1%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKT-IKAQIWDTAGQE 434
K+VL+GDS VGKSSL+ RF +++F+ +STIG F T+++ +D T +K +IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 435 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSDL-RH 611
RY+++ YYR A A++VYDI + S + W++EL+ A + I+I L GNK DL +
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIALAGNKLDLAQE 135
Query: 612 LRSIPTEEAKAFA 650
R++ +A+A+A
Sbjct: 136 RRAVEKADAEAYA 148
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 108 bits (260), Expect = 6e-25
Identities = 51/140 (36%), Positives = 87/140 (62%), Gaps = 5/140 (3%)
Frame = +3
Query: 249 YLFKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAG 428
+L KV+++G+SGVGK+S+++++ +F+ K+TIG +F T+ + VD K + Q+WDTAG
Sbjct: 7 HLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAG 66
Query: 429 QERYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHAD----QNILIMLVGNK 596
QER++++ A+YRGA +LVYD+ S+ ++ W E A + +L+GNK
Sbjct: 67 QERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNK 126
Query: 597 SDL-RHLRSIPTEEAKAFAE 653
D+ R + +A AF +
Sbjct: 127 VDVEEQKRMVSKSKALAFCQ 146
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 106 bits (254), Expect = 3e-24
Identities = 48/118 (40%), Positives = 78/118 (66%), Gaps = 3/118 (2%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
KVV++GDSGVGK+ L+++F +F+ K+TIG +F T+ + VD K + Q+WDTAGQER
Sbjct: 10 KVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQER 69
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQN---ILIMLVGNKSD 602
++++ A+YRGA ++VY++ S+ +VE W +E Q+ ++VGN+ D
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFPFIIVGNQID 127
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 83.4 bits (197), Expect = 3e-17
Identities = 41/118 (34%), Positives = 64/118 (54%)
Frame = +3
Query: 255 FKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 434
FK+VL+GD G GK++ + R EF +T+GVE + I +WDTAGQE
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLHFHTNFGEICFNVWDTAGQE 69
Query: 435 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSDLR 608
+ + YY ++++D+ ++Y NV W R+L +NI I+L GNK D++
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL-VRVCENIPIVLCGNKVDVK 126
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 74.5 bits (175), Expect = 1e-14
Identities = 37/126 (29%), Positives = 67/126 (53%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
KV +IGDS +GK+SL+ + + F+ S T+GV F ++I + I IWD GQ
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISIRNTEITFSIWDLGGQRE 71
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSDLRHLR 617
+ + AV L ++D+++ + +++ W R+ R ++ + +L+G K D H
Sbjct: 72 FVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEWYRQARGF-NKTAVPILIGTKYD--HFM 128
Query: 618 SIPTEE 635
+ P E+
Sbjct: 129 TFPRED 134
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 74.1 bits (174), Expect = 2e-14
Identities = 45/132 (34%), Positives = 70/132 (53%), Gaps = 1/132 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
++ ++G VGKSSL ++ N F TI F+ ++I G+ +I DTAGQ+
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQEFATEIIDTAGQDE 66
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQN-ILIMLVGNKSDLRHL 614
Y + S + G G +LVY I S+ V+ ++ +H + I++VGNKSDL
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKILNHTGTEWVPIVVVGNKSDLHMQ 126
Query: 615 RSIPTEEAKAFA 650
R++ EE KA A
Sbjct: 127 RAVTAEEGKALA 138
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 73.3 bits (172), Expect = 3e-14
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = +3
Query: 255 FKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQE 434
+K+V++GD GVGKS+L + ++ F TI + + +DG+ + DTAGQE
Sbjct: 9 YKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYR-KKCEIDGEGALLDVLDTAGQE 67
Query: 435 RYRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNIL-IMLVGNKSDLRH 611
Y A+ Y R G LLVY+I S+ + + +++ D++ ++LV NK DL
Sbjct: 68 EYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQILRVKDKDTFPVVLVANKCDLEA 127
Query: 612 LRSIPTEEAKAFAE 653
R + E + A+
Sbjct: 128 ERVVSRAEGEQLAK 141
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 70.9 bits (166), Expect = 1e-13
Identities = 42/118 (35%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
K+V++GD GK+SLL+ FT+ F + TI E I VDG +I+ +WDTAGQE
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQVYEPTI-FENYIHDIFVDGNSIELSLWDTAGQEE 73
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-ERWLRELRDHADQNILIMLVGNKSDLR 608
Y + S Y ++ + + S NV +WL E+ + + ++LV K DLR
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-PGVKLVLVALKCDLR 130
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 70.5 bits (165), Expect = 2e-13
Identities = 43/118 (36%), Positives = 63/118 (53%), Gaps = 1/118 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
K+V++GD GK+SLLS FT F T+ + + VDGK+++ +WDTAGQE
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS-DCRVDGKSVQLALWDTAGQEE 68
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVE-RWLRELRDHADQNILIMLVGNKSDLR 608
Y + Y A L+ + I S NV +W+ E+ N+ +LVG K+DLR
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEINTLC-PNVPFILVGMKADLR 125
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 68.9 bits (161), Expect = 6e-13
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
K+V++GD GK+ LL F++ F T+ + + VDG+ I+ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHIELALWDTAGQED 66
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-ERWLRELRDHADQNILIMLVGNKSDLRH 611
Y + Y + L+ + + S NV E+W+ E+ H N+ I+LVG K DLR+
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVL-HFCSNLPILLVGCKVDLRN 124
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 64.9 bits (151), Expect = 1e-11
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
K+V++GD GK+ LL F++ F T+ + + VDG+ ++ +WDTAGQE
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVDGRHVELALWDTAGQED 66
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-ERWLRELRDHADQNILIMLVGNKSDLRHL 614
Y + Y + L+ + + S NV E+W+ E+ H ++ I+LV K+DLR+
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVL-HFCSSLPILLVACKADLRND 125
Query: 615 RSIPTEEAK 641
I E +K
Sbjct: 126 PKIIEELSK 134
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 62.9 bits (146), Expect = 4e-11
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 2/123 (1%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATR-SIXVDGKTIKAQIWDTAGQE 434
K+V++GD G GK+ LL F+ F T+ + T + + K I+ +WDTAGQE
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQE 75
Query: 435 RYRAITSAYYRGAVGALLVYDIAKHLSYXNV-ERWLRELRDHADQNILIMLVGNKSDLRH 611
Y + Y + LL + I S NV E+W E++ H I+LVG K+DLR
Sbjct: 76 EYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQ-HFCPRTPIVLVGLKADLRK 134
Query: 612 LRS 620
R+
Sbjct: 135 DRN 137
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 59.3 bits (137), Expect = 5e-10
Identities = 37/129 (28%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
K V++GD VGK+ LL +T N+F T+ +A ++ + + ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAV-TVMIGDEPYTLGLFDTAGQED 63
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNV-ERWLRELRDHADQNILIMLVGNKSDLRHL 614
Y + Y L+ + + S+ NV E+W E+ H + ++VG + DLR
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPEVHHHC-PGVPCLIVGTQIDLRDD 122
Query: 615 RSIPTEEAK 641
S+ + A+
Sbjct: 123 PSVQQKLAR 131
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 52.4 bits (120), Expect = 5e-08
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
+++++G GK+++L + N+ ++ + T+G T V K IK +WD GQ++
Sbjct: 23 RILMLGLDAAGKTTILYKLKLNQ-SVVTIPTVGFNVET----VTYKNIKFNVWDVGGQDK 77
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVERWL-RELRDHADQNILIMLVGNKSDL 605
R + Y+ G G + V D A + L R + D ++ L++++ NK DL
Sbjct: 78 IRPLWRHYFTGTKGLIFVVDSADSNRISEARQELHRIISDREMRDCLLLVLANKQDL 134
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 43.6 bits (98), Expect = 3e-05
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
+++++G GK+++L + E + + TIG T V+ + I +WD GQ++
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEI-VTTIPTIGFNVET----VEYRNISFTVWDVGGQDK 73
Query: 438 YRAITSAYYRGAVGALLVYDI--AKHLSYXNVERWLRELRDHADQNILIMLVGNKSDL 605
R + Y++ G + V D + +S + E R L + ++ L+++ NK DL
Sbjct: 74 IRPLWRHYFQNTQGIIFVVDSNDRERISEAH-EELQRMLNEDELRDALLLVFANKQDL 130
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 42.7 bits (96), Expect = 4e-05
Identities = 33/119 (27%), Positives = 56/119 (47%), Gaps = 3/119 (2%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
+V+L+G GK+++L + N S T G F R++ V+G ++ IWD GQ+
Sbjct: 18 RVLLLGLDNAGKTTILKCLLNEDVNEVSP-TFG--FQIRTLEVEG--LRFTIWDIGGQKT 72
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNIL---IMLVGNKSDL 605
R Y+ + V D L L+EL ++ +L I+++ NKSD+
Sbjct: 73 LRNFWKNYFESTEAIIWVVDSLDDLRLEECRNTLQELL--VEEKLLFTSILVLANKSDV 129
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 39.1 bits (87), Expect = 5e-04
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +3
Query: 258 KVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAGQER 437
+VV+ GD GVGKSSL+S + E N+ S + + S + + DT
Sbjct: 5 RVVICGDQGVGKSSLISALIQ-EDNVTSIPKVFPIISIPSNPDSNDDVSLVLVDTQSDSN 63
Query: 438 YRAITSAYYRGAVGALLVYDIAKHLSYXNVE-RWLRELRDHADQNILIMLVGNKS-DLRH 611
R +A + A LVY + + SY V WL R N+ I+L NKS DL +
Sbjct: 64 EREYLAAEIKKANVICLVY--SDNYSYERVSIFWLPYFRS-LGVNVPIVLCENKSEDLDN 120
Query: 612 LRSIPTEE 635
+ + T E
Sbjct: 121 YQGLHTIE 128
Score = 28.3 bits (60), Expect = 1.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Frame = +3
Query: 240 EYDY-LFKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTI--GVEF 365
+YD +F ++G GK++LLS F N N + +T+ VEF
Sbjct: 416 KYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTPNTVVNSVEF 460
>SPBC1198.05 |||guanylate kinase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 202
Score = 27.9 bits (59), Expect = 1.4
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +3
Query: 261 VVLIGDSGVGKSSLLSRFTRN 323
VV+ G SGVGKS+LL R ++
Sbjct: 21 VVVFGPSGVGKSTLLKRLLKD 41
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 27.1 bits (57), Expect = 2.4
Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 2/34 (5%)
Frame = -3
Query: 361 STPMVDL--DXKLNSFLVKRDRRLLLPTPESPMS 266
ST M DL D +++ FL+ R++ +PT + P S
Sbjct: 219 STGMADLSKDDRISRFLILREQSKQIPTQQKPSS 252
>SPAC323.01c |||mitochondrial NADH kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 26.6 bits (56), Expect = 3.1
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 495 DIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSDLRHLRSI 623
D+AK SY N+ W E+ D + I+ VG + H S+
Sbjct: 102 DVAKKFSYLNLYTW-TEISDLEQKVDAIITVGGDGTILHAASL 143
>SPAC13G7.05 |||acyl-coA-sterol acyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 537
Score = 26.6 bits (56), Expect = 3.1
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -3
Query: 304 RRLLLPTPESPMSTTLNK*SYSSSLVPILVYPE 206
R L+ P+P S +STT+NK + S+ + PE
Sbjct: 6 RILITPSPLSDISTTINKPNVHPSMSLLKALPE 38
>SPBC354.01 |gtp1|SPBC649.06|GTP binding protein
Gtp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 363
Score = 26.2 bits (55), Expect = 4.1
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 216 TKMGTREDEYDYL----FKVVLIGDSGVGKSSLLSRFTRNEFNLXSKSTIGVEFAT 371
+K G + + +D L +V IG VGKS+LLS T+ + +T EF T
Sbjct: 46 SKSGPKGEGFDVLKSGDARVAFIGFPSVGKSTLLSAITKTK-----SATASYEFTT 96
>SPBC1215.01 |shy1||SURF-family protein Shy1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 290
Score = 26.2 bits (55), Expect = 4.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 581 HDEDVLVGVVAQLAQPSLHVXVRQVLGD 498
HD+++LVG + QP HV +L D
Sbjct: 107 HDQEMLVGPRTKEGQPGYHVVTPFILDD 134
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 255 FKVVLIGDSGVGKSSLLSR-FTRNEFNLXSKSTIG 356
F V+++G+SG GKS+L++ R+ + KS G
Sbjct: 96 FNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTG 130
>SPCC16C4.14c |sfc4||transcription factor TFIIIC complex subunit
Sfc4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1006
Score = 25.8 bits (54), Expect = 5.5
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Frame = -3
Query: 514 DRCLAMS*TSSAPTAPR*YADVMARYRSW-PAVSHI-*AFMVLPSTXI 377
D LA TS P Y +MAR RSW PA+++ AF + P I
Sbjct: 829 DDGLATVPTSYDPVLVLLYGHIMARNRSWIPAINYYSRAFAINPDCPI 876
>SPAC139.04c |fap2||L-saccharopine oxidase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 433
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 195 RLQSSG*TKMGTREDEYDYLFKVVLIGDSGVGKSSL 302
+L S+G + E +YD KVV I SG KSSL
Sbjct: 279 KLASTGYEYVCNVETDYDENSKVVSIPHSGPSKSSL 314
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.0 bits (52), Expect = 9.5
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 487 SSAPTAPR*YADVMARYRSWPA 422
SS+P P A +AR RSWPA
Sbjct: 146 SSSPLPPMSIAMNIARKRSWPA 167
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 447 ITSAYYRGAVGALLVYDIAKHLSYXNVERWLRELRDHADQNILIMLVGNKSDLRHLRSIP 626
I+ +YR +LV I H + N ER L++ N+L+ N+S +R R I
Sbjct: 595 ISVLFYRHKCFPVLV--IVPHATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLIN 652
Query: 627 TEEAK 641
++ K
Sbjct: 653 QKDPK 657
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 261 VVLIGDSGVGKSSLLSRFTR-NEFNLXSKSTIGVEFATRSIXVDGKTIKAQIWDTAG 428
++++G+S +GK++ ++ F + N+ N K T+ ++ + I DT G
Sbjct: 121 LIVVGESSLGKTTFVNSFLQSNDTNFRPKKTMDFVEHKATLSDGDQKFNLTIVDTPG 177
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,297,448
Number of Sequences: 5004
Number of extensions: 40699
Number of successful extensions: 184
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 171
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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