Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N03
(501 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62910 Cluster: 60S ribosomal protein L32; n=83; Eukary... 231 5e-60
UniRef50_P49211 Cluster: 60S ribosomal protein L32-1; n=72; Euka... 188 5e-47
UniRef50_A2R659 Cluster: Contig An15c0220, complete genome; n=7;... 161 1e-38
UniRef50_P38061 Cluster: 60S ribosomal protein L32; n=39; Eukary... 143 2e-33
UniRef50_A0DPG3 Cluster: Chromosome undetermined scaffold_59, wh... 140 2e-32
UniRef50_Q7R1L8 Cluster: GLP_28_64726_64316; n=1; Giardia lambli... 138 6e-32
UniRef50_Q9NGS3 Cluster: 60S ribosomal protein L32; n=8; Trypano... 136 3e-31
UniRef50_UPI00005A3317 Cluster: PREDICTED: similar to 60S riboso... 134 8e-31
UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S riboso... 134 1e-30
UniRef50_Q8SS18 Cluster: 60S ribosomal protein L32; n=1; Encepha... 130 2e-29
UniRef50_Q0J0S1 Cluster: Os09g0501200 protein; n=1; Oryza sativa... 127 1e-28
UniRef50_UPI00005A1969 Cluster: PREDICTED: similar to 60S riboso... 122 3e-27
UniRef50_Q9SEV3 Cluster: 60S ribosomal protein L32; n=1; Guillar... 103 2e-21
UniRef50_P34040 Cluster: 60S ribosomal protein L32; n=1; Hypocre... 103 3e-21
UniRef50_Q1RQD0 Cluster: Ribosomal protein L32; n=1; Nyctotherus... 95 6e-19
UniRef50_A2F2J1 Cluster: Ribosomal protein L32, putative; n=5; T... 95 6e-19
UniRef50_UPI00015BB237 Cluster: LSU ribosomal protein L32E; n=1;... 87 2e-16
UniRef50_O26128 Cluster: 50S ribosomal protein L32e; n=3; Methan... 87 3e-16
UniRef50_Q9UX90 Cluster: 50S ribosomal protein L32e; n=2; Sulfol... 83 3e-15
UniRef50_Q1VH30 Cluster: 50S ribosomal protein L32e; n=3; cellul... 82 6e-15
UniRef50_Q3LWI6 Cluster: Ribosomal protein L32; n=1; Bigelowiell... 78 1e-13
UniRef50_UPI00015537AF Cluster: PREDICTED: hypothetical protein;... 58 4e-13
UniRef50_P54010 Cluster: 50S ribosomal protein L32e; n=10; Eurya... 75 7e-13
UniRef50_Q74MV8 Cluster: 50S ribosomal protein L32e; n=1; Nanoar... 74 2e-12
UniRef50_Q8ZVV9 Cluster: 50S ribosomal protein L32e; n=5; Archae... 73 5e-12
UniRef50_O28371 Cluster: 50S ribosomal protein L32e; n=2; Euryar... 72 8e-12
UniRef50_Q9XFE3 Cluster: 60S ribosomal protein; n=1; Oryza sativ... 71 1e-11
UniRef50_Q9YF92 Cluster: 50S ribosomal protein L32e; n=2; Desulf... 71 1e-11
UniRef50_A0RUF7 Cluster: Ribosomal protein L32E; n=2; Thermoprot... 71 1e-11
UniRef50_A7I5Q6 Cluster: Ribosomal protein L32e; n=1; Candidatus... 69 6e-11
UniRef50_Q975J7 Cluster: 50S ribosomal protein L32e; n=3; Sulfol... 68 1e-10
UniRef50_A3H8Q6 Cluster: Ribosomal protein L32e; n=1; Caldivirga... 68 1e-10
UniRef50_A1RWR9 Cluster: Ribosomal protein L32e; n=1; Thermofilu... 67 2e-10
UniRef50_Q8TRT0 Cluster: 50S ribosomal protein L32e; n=6; Methan... 67 2e-10
UniRef50_Q2FSG6 Cluster: Ribosomal protein L32e; n=1; Methanospi... 65 1e-09
UniRef50_Q6L1B0 Cluster: 50S ribosomal protein L32e; n=5; Euryar... 62 5e-09
UniRef50_A2SPL9 Cluster: Ribosomal protein L32e; n=2; Methanomic... 61 2e-08
UniRef50_A3DNC4 Cluster: Ribosomal protein L32e; n=1; Staphyloth... 60 2e-08
UniRef50_P12736 Cluster: 50S ribosomal protein L32e; n=5; Haloba... 59 5e-08
UniRef50_A2VEI8 Cluster: IP17707p; n=1; Drosophila melanogaster|... 59 6e-08
UniRef50_Q0W1X1 Cluster: Putative 50S ribosomal protein L32E; n=... 52 1e-05
UniRef50_Q96BP1 Cluster: RPL32P3 protein; n=2; Catarrhini|Rep: R... 49 5e-05
UniRef50_Q01E89 Cluster: Chromosome 02 contig 1, DNA sequence; n... 45 8e-04
UniRef50_A4RVQ1 Cluster: Predicted protein; n=1; Ostreococcus lu... 35 0.90
UniRef50_A1ZR50 Cluster: PKD domain protein; n=1; Microscilla ma... 33 3.6
UniRef50_A3IYC6 Cluster: Chemotaxis signal transduction protein;... 32 6.3
UniRef50_Q6C2Z4 Cluster: Yarrowia lipolytica chromosome F of str... 32 6.3
UniRef50_Q65ZJ2 Cluster: Putative uncharacterized protein; n=3; ... 32 8.3
UniRef50_P75436 Cluster: Putative type I restriction enzyme MpnO... 32 8.3
UniRef50_O43071 Cluster: Pre-mRNA-processing factor 17; n=1; Sch... 32 8.3
>UniRef50_P62910 Cluster: 60S ribosomal protein L32; n=83;
Eukaryota|Rep: 60S ribosomal protein L32 - Homo sapiens
(Human)
Length = 135
Score = 231 bits (566), Expect = 5e-60
Identities = 107/133 (80%), Positives = 119/133 (89%)
Frame = +3
Query: 69 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGS 248
A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKP GIDNRVRRRFKGQ LMPNIGYGS
Sbjct: 3 ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQILMPNIGYGS 62
Query: 249 NKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRV 428
NKKT+HMLP+GFRK LVHNVKELE+L+M N+ YCAEIAH VSSK RK IVERA QL+IRV
Sbjct: 63 NKKTKHMLPSGFRKFLVHNVKELEVLLMCNKSYCAEIAHNVSSKNRKAIVERAAQLAIRV 122
Query: 429 TNAAARLRSQENE 467
TN ARLRS+ENE
Sbjct: 123 TNPNARLRSEENE 135
>UniRef50_P49211 Cluster: 60S ribosomal protein L32-1; n=72;
Eukaryota|Rep: 60S ribosomal protein L32-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 133
Score = 188 bits (459), Expect = 5e-47
Identities = 89/134 (66%), Positives = 107/134 (79%)
Frame = +3
Query: 66 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYG 245
MA+ P+ +VKKR+ +FIR QSDR +K +WR+P GID+RVRR+FKG LMPN+GYG
Sbjct: 1 MAV-PLLTKKVVKKRSAKFIRPQSDRRITVKESWRRPKGIDSRVRRKFKGVTLMPNVGYG 59
Query: 246 SNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 425
S+KKTRH LPNGF+K +VHN ELE+LMM NR YCAEIAH VS+KKRK IVERA QL +
Sbjct: 60 SDKKTRHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVV 119
Query: 426 VTNAAARLRSQENE 467
VTN ARLRSQE+E
Sbjct: 120 VTNRLARLRSQEDE 133
>UniRef50_A2R659 Cluster: Contig An15c0220, complete genome; n=7;
Trichocomaceae|Rep: Contig An15c0220, complete genome -
Aspergillus niger
Length = 179
Score = 161 bits (390), Expect = 1e-38
Identities = 75/132 (56%), Positives = 99/132 (75%)
Frame = +3
Query: 63 KMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGY 242
KM + + P IVKKRTKRF RHQSDR+ + +WRKP GIDNRVRRRF+G MP+IGY
Sbjct: 48 KMVLAKKHVP-IVKKRTKRFWRHQSDRFKCVPESWRKPKGIDNRVRRRFRGNIPMPSIGY 106
Query: 243 GSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSI 422
GSNKKT+HM+P+G + LVHN K++E+L+M NR Y AEIA VSS+KR I+ +A+ L +
Sbjct: 107 GSNKKTKHMMPSGHKAFLVHNPKDVELLLMHNRTYAAEIASAVSSRKRVDIIAKAKALGV 166
Query: 423 RVTNAAARLRSQ 458
+VTN R+ ++
Sbjct: 167 KVTNPKGRVTTE 178
>UniRef50_P38061 Cluster: 60S ribosomal protein L32; n=39;
Eukaryota|Rep: 60S ribosomal protein L32 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 130
Score = 143 bits (347), Expect = 2e-33
Identities = 67/120 (55%), Positives = 84/120 (70%)
Frame = +3
Query: 90 PTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHM 269
P IVKK TK+F RH SDRY ++ NWRK GID+ VRRRF+G P IGYGSNKKT+ +
Sbjct: 7 PKIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFL 66
Query: 270 LPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 449
P+G + LV NVK+LE L M + Y AEIAH +S+K R +I+ RA+ L I+VTN RL
Sbjct: 67 SPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
>UniRef50_A0DPG3 Cluster: Chromosome undetermined scaffold_59, whole
genome shotgun sequence; n=10; Eukaryota|Rep: Chromosome
undetermined scaffold_59, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 136
Score = 140 bits (339), Expect = 2e-32
Identities = 62/135 (45%), Positives = 97/135 (71%), Gaps = 1/135 (0%)
Frame = +3
Query: 66 MAIRPVYRPTIVKKRTKRFIRHQSDRYD-KLKRNWRKPXGIDNRVRRRFKGQYLMPNIGY 242
M ++ + IV KRTKRF+R +S+ Y KL+ +WR+P GIDNRVRRRF+G MP G+
Sbjct: 1 MVVKALAHKRIVHKRTKRFVRFESEDYPHKLRPSWRRPRGIDNRVRRRFRGNRPMPKAGH 60
Query: 243 GSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSI 422
+KKTR++ +GFRK+L+ N K+LE+L+ NR + E+AH +S++KR +V RA +L++
Sbjct: 61 RGDKKTRYLDQSGFRKLLITNEKDLELLLTNNRTFAGELAHNLSARKRATLVRRAAELNV 120
Query: 423 RVTNAAARLRSQENE 467
R+TN ++R++E +
Sbjct: 121 RLTNGKGKVRAEEKK 135
>UniRef50_Q7R1L8 Cluster: GLP_28_64726_64316; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_28_64726_64316 - Giardia lamblia
ATCC 50803
Length = 136
Score = 138 bits (334), Expect = 6e-32
Identities = 64/130 (49%), Positives = 94/130 (72%)
Frame = +3
Query: 72 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSN 251
I P+ I+KKR +FIR QS+R+ ++K +WRKP GID+ +R +++GQ M +IGYGS+
Sbjct: 6 IHPLPHKIIIKKRKNKFIRFQSERFVRVKPSWRKPRGIDSPMRHQYRGQRPMVSIGYGSD 65
Query: 252 KKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 431
K+TR MLP GF K + V EL+ L M N+ + A+IAHGVS++ RK I+E A+++ +RV
Sbjct: 66 KETRFMLPCGFFKHRISTVHELKTLFMNNKTHAAQIAHGVSARSRKQILEEAKKMGVRVL 125
Query: 432 NAAARLRSQE 461
NA A+LR +E
Sbjct: 126 NADAKLRKEE 135
>UniRef50_Q9NGS3 Cluster: 60S ribosomal protein L32; n=8;
Trypanosomatidae|Rep: 60S ribosomal protein L32 -
Leishmania donovani
Length = 134
Score = 136 bits (329), Expect = 3e-31
Identities = 61/127 (48%), Positives = 91/127 (71%), Gaps = 1/127 (0%)
Frame = +3
Query: 72 IRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSN 251
++P IVKKRTKRF RH+ + + +L +WRKP G D+ VRRR+KGQ +MPN GYGS+
Sbjct: 2 VKPTVSKAIVKKRTKRFTRHRYELFPQLSSSWRKPRGEDSPVRRRYKGQKVMPNKGYGSD 61
Query: 252 KKTRHMLPNGFRKV-LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRV 428
+ T+++ P+GFR ++NV++L +L+MQNRKY I+H V ++KRK I +A +L +R+
Sbjct: 62 RATKYITPSGFRNFPPINNVEDLYMLVMQNRKYAGVISHTVGARKRKAIARKAMELDVRL 121
Query: 429 TNAAARL 449
N A+L
Sbjct: 122 ANGNAKL 128
>UniRef50_UPI00005A3317 Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=2; Canis lupus familiaris|Rep: PREDICTED:
similar to 60S ribosomal protein L32 - Canis familiaris
Length = 218
Score = 134 bits (325), Expect = 8e-31
Identities = 69/134 (51%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +3
Query: 69 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGS 248
A+RP+ +P I K + R K+K NWR+P GID+RV FKG LMPNI Y S
Sbjct: 85 ALRPLGKPKIFKMGPRSSSGTSQIRCVKMKHNWREPRGIDDRVCGSFKGPILMPNIDYMS 144
Query: 249 NKKTRHMLPNGFRKVLVHNVKELEILMM-QNRKYCAEIAHGVSSKKRKLIVERAQQLSIR 425
++KT+ MLP+GF+K+L HN KEL++L+M N+ +CAEIAH V SK + RA QL+I
Sbjct: 145 HEKTKPMLPSGFQKLLTHNGKELKVLLMCNNKSHCAEIAHNVFSKNCRTSAGRAAQLAIE 204
Query: 426 VTNAAARLRSQENE 467
VTN A LRS+ENE
Sbjct: 205 VTNPNASLRSEENE 218
>UniRef50_UPI0000D9DE6C Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 60S ribosomal protein L32 - Macaca mulatta
Length = 199
Score = 134 bits (323), Expect = 1e-30
Identities = 62/96 (64%), Positives = 77/96 (80%)
Frame = +3
Query: 180 GIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRKYCAEI 359
GIDNR+ RRFK Q+LM NIGYGSNKK +H LP+ +K LVHN+KELE+L+ N+ YCA+I
Sbjct: 104 GIDNRIHRRFKSQFLMSNIGYGSNKKIKHTLPSSLQKFLVHNIKELEVLLKCNKSYCAKI 163
Query: 360 AHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQENE 467
A+ VSSK K IVERA QL+IRVT+ ARL S+EN+
Sbjct: 164 AYNVSSKNHKAIVERAAQLAIRVTSHNARLCSKENK 199
>UniRef50_Q8SS18 Cluster: 60S ribosomal protein L32; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L32
- Encephalitozoon cuniculi
Length = 139
Score = 130 bits (313), Expect = 2e-29
Identities = 59/115 (51%), Positives = 81/115 (70%)
Frame = +3
Query: 105 KRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGF 284
++ K+FIRH SDRY ++K +WR+P GID++VR+R KG+ MP+I Y K+ RH+LPNG
Sbjct: 19 RKNKKFIRHHSDRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGL 78
Query: 285 RKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 449
RKV + N+ +L L NR YC EIAH V ++KR IV RA++L I + N ARL
Sbjct: 79 RKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARL 133
>UniRef50_Q0J0S1 Cluster: Os09g0501200 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os09g0501200 protein -
Oryza sativa subsp. japonica (Rice)
Length = 186
Score = 127 bits (307), Expect = 1e-28
Identities = 59/88 (67%), Positives = 69/88 (78%)
Frame = +3
Query: 78 PVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKK 257
P+ IVKKR K+F R SDRY LK +WR+P GID+RVRR+FKG LMPNIGYGS+KK
Sbjct: 64 PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPNIGYGSDKK 123
Query: 258 TRHMLPNGFRKVLVHNVKELEILMMQNR 341
TRH LPN F+K +VHNV ELE+LMM NR
Sbjct: 124 TRHYLPNKFKKFVVHNVSELELLMMHNR 151
>UniRef50_UPI00005A1969 Cluster: PREDICTED: similar to 60S ribosomal
protein L32; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 60S ribosomal protein L32 - Canis familiaris
Length = 204
Score = 122 bits (295), Expect = 3e-27
Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
Frame = +3
Query: 12 CGRVTAWFTVAFLKETYKMAIRPVYRPTIVK--KRTKRFIRHQSDRYDKLKRNWRKPXGI 185
C T+ A + ++IRP+ +P IVK KRTK+FI+ QSD+Y K+K NW KP G+
Sbjct: 41 CAAATSMAIAAGGGSHHLLSIRPLGKPKIVKIKKRTKKFIQLQSDQYAKIKHNWWKPRGV 100
Query: 186 DNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNR 341
NRV RRFK Q LMPN GY SNKKT+ ML +GF K LV+N+KE+E+L+M N+
Sbjct: 101 GNRVLRRFKDQILMPNTGYRSNKKTKPMLLSGFEKFLVYNIKEVEVLLMCNK 152
>UniRef50_Q9SEV3 Cluster: 60S ribosomal protein L32; n=1; Guillardia
theta|Rep: 60S ribosomal protein L32 - Guillardia theta
(Cryptomonas phi)
Length = 119
Score = 103 bits (248), Expect = 2e-21
Identities = 50/112 (44%), Positives = 73/112 (65%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 278
+ K K F RH++ +Y ++ WRKP GID+ VRRRFKG+ MPNIGYGS+KK+R++
Sbjct: 4 LNKTKKNFKRHEAKKYKRINAGWRKPKGIDSCVRRRFKGKTKMPNIGYGSSKKSRYLGKT 63
Query: 279 GFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
G V + KEL+ L+M N Y EI+ + +K+K I+E+A ++VTN
Sbjct: 64 GRYIFKVKSPKELDFLIMSNLFYDIEISKKLGKEKKKKIIEKAIIYDMKVTN 115
>UniRef50_P34040 Cluster: 60S ribosomal protein L32; n=1; Hypocrea
lixii|Rep: 60S ribosomal protein L32 - Trichoderma
harzianum (Hypocrea lixii)
Length = 137
Score = 103 bits (246), Expect = 3e-21
Identities = 53/101 (52%), Positives = 63/101 (62%), Gaps = 4/101 (3%)
Frame = +3
Query: 96 IVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 275
IVKK F RHQSDR+D++ +WRKP GID RVRRRF+G MP IGYGSNKKTR + P
Sbjct: 10 IVKKHKTTFARHQSDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTP 69
Query: 276 NGFRKVLVHNVKELEIL----MMQNRKYCAEIAHGVSSKKR 386
+G +HN + L M AEIA VSS+KR
Sbjct: 70 SG-HNAFLHNARTLSCAAGCSMQSTDPSAAEIATPVSSRKR 109
>UniRef50_Q1RQD0 Cluster: Ribosomal protein L32; n=1; Nyctotherus
ovalis|Rep: Ribosomal protein L32 - Nyctotherus ovalis
Length = 105
Score = 95.5 bits (227), Expect = 6e-19
Identities = 41/76 (53%), Positives = 56/76 (73%)
Frame = +3
Query: 153 LKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMM 332
+K +WRKP GIDNRVRR+ G MP GYGSN++TR ML NG +K ++ K+LE+L+M
Sbjct: 1 MKTSWRKPGGIDNRVRRKCGGTIRMPGAGYGSNRQTRFMLANGLKKFVITCAKDLELLLM 60
Query: 333 QNRKYCAEIAHGVSSK 380
NR++ EIAH +S+K
Sbjct: 61 HNREFMGEIAHNLSAK 76
>UniRef50_A2F2J1 Cluster: Ribosomal protein L32, putative; n=5;
Trichomonas vaginalis G3|Rep: Ribosomal protein L32,
putative - Trichomonas vaginalis G3
Length = 150
Score = 95.5 bits (227), Expect = 6e-19
Identities = 43/99 (43%), Positives = 72/99 (72%)
Frame = +3
Query: 165 WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLVHNVKELEILMMQNRK 344
WR P GID+R RR+++G L P+ G+GS+K+TR MLPNGF V+V ++K+L++L+ +N
Sbjct: 51 WRHPRGIDSRFRRKYRGTPLHPSAGFGSDKETRFMLPNGFIPVIVRSLKDLDMLLTKNTT 110
Query: 345 YCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQE 461
+ A I+ V +K ++ I+++AQ+L+I + N A + +QE
Sbjct: 111 HGAMISAQVGAKLQQEIIKKAQELNIEILNQARKHVAQE 149
>UniRef50_UPI00015BB237 Cluster: LSU ribosomal protein L32E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L32E - Ignicoccus hospitalis KIN4/I
Length = 148
Score = 87.0 bits (206), Expect = 2e-16
Identities = 47/107 (43%), Positives = 64/107 (59%), Gaps = 2/107 (1%)
Frame = +3
Query: 120 FIRHQSDRYDKLKRN--WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKV 293
FIR+ RY +L+R WRKP G DN+ R + KG + +GY + K+ R + P+G V
Sbjct: 39 FIRYHWWRYFRLERGYKWRKPKGNDNKSRLQLKGYPPIVKVGYRTPKEVRGLHPSGLEPV 98
Query: 294 LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
+VHNVKELE + K+ IA V KKR I+ RAQ+L +RV N
Sbjct: 99 IVHNVKELE--KVDKEKHIVYIASSVGKKKRAEIIRRAQELGVRVAN 143
>UniRef50_O26128 Cluster: 50S ribosomal protein L32e; n=3;
Methanobacteriaceae|Rep: 50S ribosomal protein L32e -
Methanobacterium thermoautotrophicum
Length = 108
Score = 86.6 bits (205), Expect = 3e-16
Identities = 44/107 (41%), Positives = 66/107 (61%)
Frame = +3
Query: 114 KRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKV 293
K+F R + RY KL WR+P G +++RR KG+ MP IGY + R + P+G+ V
Sbjct: 3 KKFKRQEYARYKKLGEKWRRPRGRTSKMRRYEKGKPAMPAIGYRKPSEVRGLHPSGYEDV 62
Query: 294 LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
LV N++ELE L K A IA V ++K+ L++E+A++L I+V N
Sbjct: 63 LVSNMRELEAL--DPEKQAARIASAVGARKKTLMLEKARELGIKVLN 107
>UniRef50_Q9UX90 Cluster: 50S ribosomal protein L32e; n=2;
Sulfolobaceae|Rep: 50S ribosomal protein L32e -
Sulfolobus solfataricus
Length = 138
Score = 83.0 bits (196), Expect = 3e-15
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRN--WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 272
+K + +F+R+ SD++ +L R WR+P G DN+ R + +G + ++GY KK R
Sbjct: 20 LKAKKPKFLRYDSDKFYRLGRQEKWRRPYGRDNKTRLKVRGFPAIVSVGYRLPKKVRGFH 79
Query: 273 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
P+G R+V+VHNV EL + Q I+ V KKR I+ +A++L ++V+N
Sbjct: 80 PSGLRQVIVHNVNELVKVQNQKDNVIVTISSSVGFKKRLEILNKARELGLKVSN 133
>UniRef50_Q1VH30 Cluster: 50S ribosomal protein L32e; n=3; cellular
organisms|Rep: 50S ribosomal protein L32e -
Psychroflexus torquis ATCC 700755
Length = 238
Score = 82.2 bits (194), Expect = 6e-15
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +3
Query: 102 KKRTKRFIRHQSDRYDKLKRN-WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 278
KK+T F R + RY +L R+ WR P G+DN+ RR +K + + IG+G R + P+
Sbjct: 124 KKKTPSFRRTEWFRYKRLSRSGWRAPHGMDNKQRRNYKYRGSLVRIGHGKVAAARFLHPS 183
Query: 279 GFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
GFR+++VHN+ +LE + + A + V +KR+ I RA +L +RV N
Sbjct: 184 GFREIMVHNIDDLETIDPETE--AARVGATVGGRKREHIYARADELGVRVLN 233
>UniRef50_Q3LWI6 Cluster: Ribosomal protein L32; n=1; Bigelowiella
natans|Rep: Ribosomal protein L32 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 106
Score = 78.2 bits (184), Expect = 1e-13
Identities = 33/94 (35%), Positives = 58/94 (61%)
Frame = +3
Query: 114 KRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKV 293
K F++H S ++K+ WRKP GID+++R+R KG P IGYGS+K+ + + G + +
Sbjct: 3 KSFLKHNSKSLIRIKKKWRKPIGIDSKIRKRTKGAPKTPKIGYGSSKRIKSLNATGLKTI 62
Query: 294 LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLI 395
V N+ +++ ++ R Y ++ +S K +KLI
Sbjct: 63 HVFNLNDIKSSIILKRSYSYCLSKNISLKNKKLI 96
>UniRef50_UPI00015537AF Cluster: PREDICTED: hypothetical protein;
n=2; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 125
Score = 58.4 bits (135), Expect(2) = 4e-13
Identities = 30/69 (43%), Positives = 43/69 (62%)
Frame = +3
Query: 69 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGS 248
A++P+ +P I +KR+K+ HQSD ++K W++P I V KG+ LM IGYG
Sbjct: 3 ALQPLVKPKISRKRSKKCTWHQSDGCVRMKPAWQEPRSISTWVWGGLKGKVLMLRIGYG- 61
Query: 249 NKKTRHMLP 275
NK T+ MLP
Sbjct: 62 NKMTKLMLP 70
Score = 37.9 bits (84), Expect(2) = 4e-13
Identities = 19/36 (52%), Positives = 26/36 (72%)
Frame = +3
Query: 357 IAHGVSSKKRKLIVERAQQLSIRVTNAAARLRSQEN 464
I+ +SSK + IVERA L+IRVT+A ARL ++N
Sbjct: 72 ISFSLSSKNLEAIVERAAWLAIRVTDANARLHGEDN 107
>UniRef50_P54010 Cluster: 50S ribosomal protein L32e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Methanococcus jannaschii
Length = 146
Score = 75.4 bits (177), Expect = 7e-13
Identities = 41/112 (36%), Positives = 67/112 (59%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPN 278
+K + FIR ++ R+ +L WR+P G +++R ++K + + IGY S K R + P+
Sbjct: 11 LKMKKPDFIRQEAHRHKRLGEKWRRPKGRHSKMRLKWKEKPPVVEIGYRSPKAVRGLHPS 70
Query: 279 GFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
G VLV+NVK+LE L + + A IA V +K+ I+ RA++L IR+ N
Sbjct: 71 GLEDVLVYNVKDLEKLNPETQG--ARIASTVGKRKKIEIIIRARELGIRILN 120
>UniRef50_Q74MV8 Cluster: 50S ribosomal protein L32e; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L32e -
Nanoarchaeum equitans
Length = 135
Score = 73.7 bits (173), Expect = 2e-12
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 2/114 (1%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRN--WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 272
+K++ F+R R + + WR G DN+ R + KG+ P GY S +K R +L
Sbjct: 22 LKRKKPEFLRTNWYRKKAFRNDPKWRWGHGRDNKFRLKMKGKPRPPEPGYRSPRKVRGLL 81
Query: 273 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
PNG + V++HNV+EL + A I H V +KR+ I+E+A++LSI + N
Sbjct: 82 PNGLKPVIIHNVEELTKI---KEGEIAVIHHAVGKRKRQQILEKAKELSIPIAN 132
>UniRef50_Q8ZVV9 Cluster: 50S ribosomal protein L32e; n=5;
Archaea|Rep: 50S ribosomal protein L32e - Pyrobaculum
aerophilum
Length = 152
Score = 72.5 bits (170), Expect = 5e-12
Identities = 39/119 (32%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +3
Query: 96 IVKKRTKRFIRHQSDRYDKLKRN-WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 272
++K++ F+R RY +++ + WR IDN++RR++KG +GY R +
Sbjct: 21 LLKRKKPEFVRIDQWRYKRIEDSGWRNTRSIDNKIRRKWKGWPKPVEVGYRKPAAVRGLH 80
Query: 273 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARL 449
P+GF +VLVHNV+EL + + + I V +KR IV+RA+++ V N R+
Sbjct: 81 PSGFVEVLVHNVEEL--AKLDPKTHAIRIGRTVGLRKRIEIVKRAREMGFYVLNPGKRV 137
>UniRef50_O28371 Cluster: 50S ribosomal protein L32e; n=2;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Archaeoglobus fulgidus
Length = 129
Score = 71.7 bits (168), Expect = 8e-12
Identities = 39/115 (33%), Positives = 70/115 (60%), Gaps = 4/115 (3%)
Frame = +3
Query: 102 KKRTKRFIRHQSDRYDKLK-RNWRKPXGIDNRVRRRFKGQY---LMPNIGYGSNKKTRHM 269
K R F R+ ++ +L+ ++WR+P G+ N++R+R+ G++ + N+G+GS K R +
Sbjct: 14 KARKPEFRRYCWNKKLRLRNKSWRRPRGLFNKLRKRYGGKWSGRIPVNVGFGSPKAVRGL 73
Query: 270 LPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
P+G+ +VLV+N +LE + + IA V KKR I ++A++L I+V N
Sbjct: 74 HPSGYEEVLVYNPADLE--KIDKERQAVRIASCVGMKKRLAIEDKAKELGIKVLN 126
>UniRef50_Q9XFE3 Cluster: 60S ribosomal protein; n=1; Oryza
sativa|Rep: 60S ribosomal protein - Oryza sativa (Rice)
Length = 114
Score = 71.3 bits (167), Expect = 1e-11
Identities = 35/57 (61%), Positives = 42/57 (73%)
Frame = +3
Query: 63 KMAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPN 233
KMA+ P+ IVKKR K+F R SDRY LK +WR+P GID+RVRR+FKG LMPN
Sbjct: 10 KMAV-PLLTKKIVKKRVKQFKRPHSDRYIGLKTSWRRPKGIDSRVRRKFKGCTLMPN 65
>UniRef50_Q9YF92 Cluster: 50S ribosomal protein L32e; n=2;
Desulfurococcales|Rep: 50S ribosomal protein L32e -
Aeropyrum pernix
Length = 145
Score = 71.3 bits (167), Expect = 1e-11
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 2/118 (1%)
Frame = +3
Query: 87 RPTIVKKRTKRFIRHQSDRYDKLKRN--WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKT 260
R I K RF+R+ S R+ K +R WRKP G DN++R + KG + +GY + K
Sbjct: 30 RRLIASKSRHRFLRYLSWRFWKFERRDYWRKPKGNDNKMRLQLKGYPPIVKVGYRTPKAI 89
Query: 261 RHMLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
R M P+G V+V + K+LE L + ++ IA GV +K++ I A + RV N
Sbjct: 90 RGMHPSGLEPVIVSSAKDLERLSPE--RHIVYIASGVGLRKKQEIRRAALERGFRVAN 145
>UniRef50_A0RUF7 Cluster: Ribosomal protein L32E; n=2;
Thermoprotei|Rep: Ribosomal protein L32E - Cenarchaeum
symbiosum
Length = 134
Score = 70.9 bits (166), Expect = 1e-11
Identities = 37/114 (32%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRR-RFKGQYLMPNIGYGSNKKTRHMLP 275
V K F+R +S RY ++K WRKP G+DN R+ + +G+ + +GYG + R + P
Sbjct: 14 VAKHRPDFVRAESWRYKRIKPAWRKPKGVDNHQRKQKSRGRPGLVKVGYGGPRAARGLHP 73
Query: 276 NGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 437
+G+ LV+N ++ +L I H V ++KRK+I A + ++ NA
Sbjct: 74 SGYTDNLVYNTADISVL--DPATDGLRIGHSVGARKRKIIAAFAVEKKFKIFNA 125
>UniRef50_A7I5Q6 Cluster: Ribosomal protein L32e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein L32e -
Methanoregula boonei (strain 6A8)
Length = 246
Score = 68.9 bits (161), Expect = 6e-11
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Frame = +3
Query: 96 IVKKRTKR---FIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRH 266
+++ RT++ F RH +L +WRKP G N+ R + K + +P G+GS R
Sbjct: 8 LIRVRTEKGAVFKRHGFGTKPQLSDSWRKPRGQHNKQREQKKAKGNLPKPGFGSPIAVRG 67
Query: 267 MLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 437
M P+GF +VLV K+LE L ++ + I+ GV ++KRK + E+A I++ NA
Sbjct: 68 MHPSGFFEVLVFTEKDLENLDVKTQ--AIRISAGVGARKRKALQEKAAASGIKILNA 122
>UniRef50_Q975J7 Cluster: 50S ribosomal protein L32e; n=3;
Sulfolobus|Rep: 50S ribosomal protein L32e - Sulfolobus
tokodaii
Length = 131
Score = 68.1 bits (159), Expect = 1e-10
Identities = 34/114 (29%), Positives = 62/114 (54%), Gaps = 2/114 (1%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRN--WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 272
++++ +F+R+ D++ ++ R WRKP GIDN VR KG IG+ S ++ R +
Sbjct: 17 IREKKIKFLRYDWDKFYRIGRQETWRKPKGIDNPVRLELKGYQPKVKIGFRSPREIRGLH 76
Query: 273 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
P+G V+N K+LE K + + KK+ +VE A+++ +++ N
Sbjct: 77 PSGLIPFYVNNKKDLEKASQMKDKVIVVFSSTIGLKKKLELVEEAKKMGLKIAN 130
>UniRef50_A3H8Q6 Cluster: Ribosomal protein L32e; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L32e -
Caldivirga maquilingensis IC-167
Length = 197
Score = 67.7 bits (158), Expect = 1e-10
Identities = 43/127 (33%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Frame = +3
Query: 99 VKKRTKR--FIRHQSDRYD-KLKRN-WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRH 266
++ R +R FIR+ + + +L+ + WR+P GIDN++R + KG M N+GY + R
Sbjct: 71 IRMRRERYGFIRYYNKEHKIRLEDSPWRRPKGIDNKIRMKRKGYPPMVNVGYRGPRGVRG 130
Query: 267 MLPNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 446
+ P+GF +V+VHN +EL + + + IA V +KR I+ A + I+V N R
Sbjct: 131 IHPSGFIEVIVHNPEELSRVNPETQ--AIRIASTVGVRKRIEIIREAVRRGIKVLNVDKR 188
Query: 447 LRSQENE 467
R E
Sbjct: 189 TREAIRE 195
>UniRef50_A1RWR9 Cluster: Ribosomal protein L32e; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L32e - Thermofilum
pendens (strain Hrk 5)
Length = 159
Score = 66.9 bits (156), Expect = 2e-10
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 1/115 (0%)
Frame = +3
Query: 96 IVKKRTKRFIRHQSDRYDKLKRNWRKPXG-IDNRVRRRFKGQYLMPNIGYGSNKKTRHML 272
++ + F R ++ +L+ WR P +DN++R + KG M +GY + R +
Sbjct: 45 LISRHRPHFTRMNIWQFKRLEDVWRSPRHFLDNKIRLQRKGFPPMVKVGYRGPRAVRGLH 104
Query: 273 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNA 437
P+GF +VLV +VK+L L + K+ I+ V KKR I+++A++L R+ NA
Sbjct: 105 PSGFEEVLVSSVKDL--LGLDPAKHAIRISAKVGKKKRGEIIKKAEELGFRILNA 157
>UniRef50_Q8TRT0 Cluster: 50S ribosomal protein L32e; n=6;
Methanosarcinaceae|Rep: 50S ribosomal protein L32e -
Methanosarcina acetivorans
Length = 129
Score = 66.9 bits (156), Expect = 2e-10
Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 1/115 (0%)
Frame = +3
Query: 96 IVKKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLP 275
+ K + +F R S ++ +L NWR+P G + RR++ + + +GYGS + + P
Sbjct: 14 VQKGKKPQFKRTCSHKFKRLDDNWRRPRGSQGKQRRKYVSKGALVQVGYGSPAAVKGLHP 73
Query: 276 NGFRKVLVHNVKELEILMMQNRKYCA-EIAHGVSSKKRKLIVERAQQLSIRVTNA 437
+G+ VL+ ++ ELE++ + Y A IA + ++K+ LI+ +A++ I+V N+
Sbjct: 74 SGYSDVLISSIAELELV---DPSYEAIRIAGTIGAQKKALILAKAEEAGIKVLNS 125
>UniRef50_Q2FSG6 Cluster: Ribosomal protein L32e; n=1;
Methanospirillum hungatei JF-1|Rep: Ribosomal protein
L32e - Methanospirillum hungatei (strain JF-1 / DSM 864)
Length = 149
Score = 64.9 bits (151), Expect = 1e-09
Identities = 36/111 (32%), Positives = 60/111 (54%)
Frame = +3
Query: 102 KKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 281
K + RF R D+ + +WR+P G+ ++ R++ K + P GYGS R M P G
Sbjct: 13 KSKDARFKREGVDKKKTISDSWRRPRGLHSKQRKQRKAKGPHPTPGYGSPLAVRGMHPCG 72
Query: 282 FRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
++V V N+ +LE + + IA V KKR+++ +A +L+IR+ N
Sbjct: 73 LKEVRVFNLNDLE--GVDPITHAIRIAATVGRKKREVVQNKAAELNIRILN 121
>UniRef50_Q6L1B0 Cluster: 50S ribosomal protein L32e; n=5;
Euryarchaeota|Rep: 50S ribosomal protein L32e -
Picrophilus torridus
Length = 134
Score = 62.5 bits (145), Expect = 5e-09
Identities = 39/115 (33%), Positives = 58/115 (50%)
Frame = +3
Query: 102 KKRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNG 281
+KR + F R + RY K +WRKP G +++R + + + GY S R + P+G
Sbjct: 23 RKRVE-FRRQEWFRYKKFNESWRKPRGKHSKLREHLGYRPPVVDAGYRSPAAVRGLHPSG 81
Query: 282 FRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAAR 446
F + LV+NV +L+ + A IA V +KRK I E A L I V N +
Sbjct: 82 FAEKLVYNVNDLKSINPDREG--ARIASSVGMRKRKEIEEEADNLGIHVFNRVVK 134
>UniRef50_A2SPL9 Cluster: Ribosomal protein L32e; n=2;
Methanomicrobiales|Rep: Ribosomal protein L32e -
Methanocorpusculum labreanum (strain ATCC 43576 / DSM
4855 / Z)
Length = 144
Score = 60.9 bits (141), Expect = 2e-08
Identities = 33/110 (30%), Positives = 55/110 (50%)
Frame = +3
Query: 105 KRTKRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGF 284
K++ RF R KL +WR+P G+ ++ R+ ++ + P G+G+ K R P+G+
Sbjct: 15 KKSSRFARQCLQAKVKLADSWRRPRGLHSKQRKDYRAKGAHPEAGFGAPKAVRGFHPSGY 74
Query: 285 RKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
R+ LV EL+ + I V KR +I +A +L I+V N
Sbjct: 75 REALVFTPVELD--AVDPATTAVRIGASVGGAKRSVIQTKAAELGIKVLN 122
>UniRef50_A3DNC4 Cluster: Ribosomal protein L32e; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L32e -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 136
Score = 60.5 bits (140), Expect = 2e-08
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 2/122 (1%)
Frame = +3
Query: 99 VKKRTKRFIRHQSDRYDKLKRN--WRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHML 272
+K + F+RH + K + + WRKP G DN++R + KG + +GY K R +
Sbjct: 17 LKSKKPEFLRHLWWKKPKFRNDPKWRKPKGTDNKMRLKKKGYPPLVEVGYRGPKLVRGLH 76
Query: 273 PNGFRKVLVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTNAAARLR 452
P+G + V++H+ KEL+ + + I V +KR I+ A + +V N + +
Sbjct: 77 PSGLKPVVIHDPKELD--RLDPNMHILYIGRTVGLRKRIEIMRIASEKGFKVANQISLSQ 134
Query: 453 SQ 458
Q
Sbjct: 135 KQ 136
>UniRef50_P12736 Cluster: 50S ribosomal protein L32e; n=5;
Halobacteriaceae|Rep: 50S ribosomal protein L32e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 241
Score = 59.3 bits (137), Expect = 5e-08
Identities = 36/106 (33%), Positives = 53/106 (50%)
Frame = +3
Query: 117 RFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVL 296
+F R + ++ +WRKP G ++ RR KG+ G+ S R P+GF +V
Sbjct: 128 QFNRQDHHKKKRVSTSWRKPRGQLSKQRRGIKGKGDTVEAGFRSPTAVRGKHPSGFEEVR 187
Query: 297 VHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
VHNV +LE + IA V ++KR+ I E A+ IRV N
Sbjct: 188 VHNVDDLE--GVDGDTEAVRIASKVGARKRERIEEEAEDAGIRVLN 231
>UniRef50_A2VEI8 Cluster: IP17707p; n=1; Drosophila
melanogaster|Rep: IP17707p - Drosophila melanogaster
(Fruit fly)
Length = 126
Score = 58.8 bits (136), Expect = 6e-08
Identities = 37/98 (37%), Positives = 51/98 (52%)
Frame = +2
Query: 182 Y*QQSPQAVQGSILDAQHWLRFQQEDPSYAPKWIP*GPSSQC*RAGNLDDAKQEVLRRDR 361
Y QQS +QG++ DAQH LR +Q P +A I P +Q RAG A+ +LRRDR
Sbjct: 7 YRQQSASPLQGTVSDAQHRLRIEQAHPPHAAHRIQEVPGAQRARAGGPAHAEPRLLRRDR 66
Query: 362 SWCLFEEAEADRGKSPAAQHQSDECGRSPPLPGE*INI 475
L +EA+ D AA + RSP E +++
Sbjct: 67 PRRLLQEAQGDCRARQAAVGPPHQPQRSPAFSRERVSL 104
>UniRef50_Q0W1X1 Cluster: Putative 50S ribosomal protein L32E; n=1;
uncultured methanogenic archaeon RC-I|Rep: Putative 50S
ribosomal protein L32E - Uncultured methanogenic
archaeon RC-I
Length = 221
Score = 51.6 bits (118), Expect = 1e-05
Identities = 32/105 (30%), Positives = 55/105 (52%)
Frame = +3
Query: 120 FIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKKTRHMLPNGFRKVLV 299
F R S + KL +WR+P G ++ RR K + IGYGS + P+G+++VLV
Sbjct: 111 FNRIDSHKKIKLSASWRRPRGHHSQFRRGKKAKGAKVKIGYGSPAEVNGFHPSGYQEVLV 170
Query: 300 HNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVTN 434
H ++++ + + I V KK+ I + A++ +I+V N
Sbjct: 171 HRPEDVKGIA---KTQAIRIGGTVGRKKQLEIEKIAKEQNIKVLN 212
>UniRef50_Q96BP1 Cluster: RPL32P3 protein; n=2; Catarrhini|Rep:
RPL32P3 protein - Homo sapiens (Human)
Length = 82
Score = 49.2 bits (112), Expect = 5e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +3
Query: 69 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 158
A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3 ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32
>UniRef50_Q01E89 Cluster: Chromosome 02 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 02 contig 1, DNA
sequence - Ostreococcus tauri
Length = 182
Score = 45.2 bits (102), Expect = 8e-04
Identities = 23/67 (34%), Positives = 42/67 (62%)
Frame = -2
Query: 434 IRHSDAELLGSFHDQLPLLRRDTMSDLCAVLPVLHHQDFQLFNIVN*DLTESIWEHMTGL 255
+ H ELL S +D L + R + DL AVL V+H ++ ++ ++V+ +L E++ + ++ L
Sbjct: 50 VGHLHVELLRSLNDGLAVKRGHVVRDLGAVLAVVHEEEVKVLHVVDSELQEAVRQQVSRL 109
Query: 254 LVGTVTN 234
L TVT+
Sbjct: 110 LRRTVTD 116
>UniRef50_A4RVQ1 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 51
Score = 35.1 bits (77), Expect = 0.90
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +3
Query: 72 IRPVYRPTIVKKRTKRFIRHQSDRYDKL 155
+ P+ + IVKKRTK F ++QSDRY ++
Sbjct: 2 VTPLIKHKIVKKRTKTFKKYQSDRYKRI 29
>UniRef50_A1ZR50 Cluster: PKD domain protein; n=1; Microscilla
marina ATCC 23134|Rep: PKD domain protein - Microscilla
marina ATCC 23134
Length = 3443
Score = 33.1 bits (72), Expect = 3.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = -2
Query: 308 NIVN*DLTESIWEHMTGLLVGTVTNVGHQVLTLEPPADSVVN 183
NIV + T+ + EH +L GT ++ VLT++P AD N
Sbjct: 370 NIVIRNTTDGVDEHTISILDGTQVSISGNVLTIDPAADLNAN 411
>UniRef50_A3IYC6 Cluster: Chemotaxis signal transduction protein;
n=1; Cyanothece sp. CCY 0110|Rep: Chemotaxis signal
transduction protein - Cyanothece sp. CCY 0110
Length = 356
Score = 32.3 bits (70), Expect = 6.3
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Frame = -2
Query: 347 VLPVLHHQDFQLFN-IVN*DLTESIWE-HMTGLLVGTVTNVGHQVLTLEPP-ADSVVNTX 177
+LPV+H D +L N I LT+SI + L +G + N H+V+ +EP + ++
Sbjct: 52 LLPVMH-LDLRLSNSITRCQLTDSIIVLNWDNLQIGVIVNTVHEVIEIEPEIIEQEIDYG 110
Query: 176 RFTPIPLKFVIAIRLMPDKSL 114
R I F+ I + D ++
Sbjct: 111 RTNNINPAFISGIATIDDSAI 131
>UniRef50_Q6C2Z4 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 756
Score = 32.3 bits (70), Expect = 6.3
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +3
Query: 225 MPNIGYGSNKKTRHMLPNGFRKVL-VHNVKELEILMMQNRKYCAEIAHGVSSKKRKL 392
+P + YG K +H+L + R V+ V ++K L +L R YC ++ V + L
Sbjct: 657 LPELDYGLVSKLKHLLIDPDRSVIGVRSLKYLIMLRPPTRDYCLDVIEEVYQENESL 713
>UniRef50_Q65ZJ2 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 345
Score = 31.9 bits (69), Expect = 8.3
Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 4/132 (3%)
Frame = +3
Query: 84 YRPTIVKKRT--KRFIRHQSDRYDKLKRNWRKPXGIDNRVRRRFKGQYLMPNIGYGSNKK 257
Y P + KK +RFI ++R+D + RN P R + + Q L+ + Y S+ +
Sbjct: 4 YPPLVTKKEIIYRRFIDDHNERFDNIVRN---PTSYPPRAPKPERPQNLVVSHNYHSDVE 60
Query: 258 TRHMLPNGFRKV--LVHNVKELEILMMQNRKYCAEIAHGVSSKKRKLIVERAQQLSIRVT 431
+ L +K+ ++ ++ ++A +++ K I +R +L +T
Sbjct: 61 AEYQLSKINKKLDRIIEILRSPSTKKTSQEPPIIDVARQEQTRQYKDICDRLDKLEAELT 120
Query: 432 NAAARLRSQENE 467
+ +NE
Sbjct: 121 GKTQFVAPLQNE 132
>UniRef50_P75436 Cluster: Putative type I restriction enzyme
MpnORFDP M protein; n=6; Bacteria|Rep: Putative type I
restriction enzyme MpnORFDP M protein - Mycoplasma
pneumoniae
Length = 543
Score = 31.9 bits (69), Expect = 8.3
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = -2
Query: 368 TMSDLCAVLPVLHHQDFQLFNIVN*D-LTESIWEHMTGLLVGTVTNVGHQVLTLEPP 201
T +LC + +LH+ D+ FNI+N D LT WE V G +V+ PP
Sbjct: 269 TTYNLCRMNMILHNIDYANFNIINADTLTTKEWEKH---YVNCSNENGFEVVVSNPP 322
>UniRef50_O43071 Cluster: Pre-mRNA-processing factor 17; n=1;
Schizosaccharomyces pombe|Rep: Pre-mRNA-processing
factor 17 - Schizosaccharomyces pombe (Fission yeast)
Length = 558
Score = 31.9 bits (69), Expect = 8.3
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = -2
Query: 311 FNIVN*DLTESIWEHMTGLLVGTVTNVGHQVLTLEPPADSVVNTXRF-TPIPLKFV--IA 141
F+I + D+ ++ H+ G+ T G + +T DS + + TP+P+KFV IA
Sbjct: 381 FDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSD--DSSMRFWEYGTPVPIKFVADIA 438
Query: 140 IRLMPDKSLRP 108
+ MP +LRP
Sbjct: 439 MHSMPRVALRP 449
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 478,809,346
Number of Sequences: 1657284
Number of extensions: 9390397
Number of successful extensions: 27765
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 27114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27750
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 29691847201
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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