Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_N01
(590 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 29 0.026
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 25 0.42
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 25 0.42
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 24 0.97
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 2.2
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 23 2.2
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 3.9
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 5.2
DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein. 21 6.8
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 9.0
AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein. 21 9.0
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 29.5 bits (63), Expect = 0.026
Identities = 11/42 (26%), Positives = 18/42 (42%)
Frame = +1
Query: 451 HDHRHLQXAAHGWHAPVVSPHYGAGSPVTLHGGYQXPVHQHH 576
H H H+ H H+ +PH+ +P+ H Y + H
Sbjct: 421 HGHSHIHATPHHHHSHAATPHHQHSTPLA-HSSYPAAIQIGH 461
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 102 VALRCGSGGGHLTSPIRQRATCACVRYG 19
V R S GGH+ P R AT AC G
Sbjct: 1312 VPARITSFGGHVVRPWRGSATLACNAVG 1339
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.4 bits (53), Expect = 0.42
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 102 VALRCGSGGGHLTSPIRQRATCACVRYG 19
V R S GGH+ P R AT AC G
Sbjct: 1308 VPARITSFGGHVVRPWRGSATLACNAVG 1335
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 24.2 bits (50), Expect = 0.97
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 85 TAAQRDPRAVFAKE*AS*RLESLRAGK-TPSTVDLRYGAMAATTYMPAEMELGNIGGYHA 261
T + P ++ E + L++LR G + + +G ++T Y A E +
Sbjct: 455 TPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFN 514
Query: 262 ASPRSAEPADM 294
ASP + PAD+
Sbjct: 515 ASPTTWSPADL 525
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -3
Query: 471 LQVAVVVRSRGRLHVWLMCVCVMLVHRP 388
L VAV R R ++++ + V ++HRP
Sbjct: 110 LSVAVYCRDRLNPNLFIYALSVAILHRP 137
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.0 bits (47), Expect = 2.2
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +2
Query: 368 HCHPPTPGR-CTSITHTHINQT*SLPRLLTTTATCSXRPTAGTRP 499
H HP PG T+IT T + TTT + + + T P
Sbjct: 645 HSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASATTP 689
Score = 23.0 bits (47), Expect = 2.2
Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = +1
Query: 268 PRSAEPA--DMKYQHPLHSGGSPSPGAP 345
PR A+ + D Y+ P SGG P P P
Sbjct: 1342 PRLAQDSSEDESYRGPSASGGRPVPERP 1369
Score = 22.2 bits (45), Expect = 3.9
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Frame = +2
Query: 380 PTPGRCTSI----THTHINQT*SLPRLLTTTATCSXRPTAGTRPSSARIT 517
P PG I H + T SLP +TTT T + TA T ++A T
Sbjct: 81 PVPGNLEQIGSRPLHPPASST-SLPATITTTTTTTTTTTA-TAAATATTT 128
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.2 bits (45), Expect = 3.9
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 581 SIWCWCTGHWYPP 543
S+WCW T Y P
Sbjct: 456 SVWCWDTRKEYIP 468
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -1
Query: 350 ITGAPGDGDPPECNG 306
IT G+GDPPE NG
Sbjct: 520 ITSTFGNGDPPE-NG 533
>DQ435327-1|ABD92642.1| 145|Apis mellifera OBP10 protein.
Length = 145
Score = 21.4 bits (43), Expect = 6.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 446 LLTTTATCSXRPTAGTRPS 502
LL T CS GTRPS
Sbjct: 9 LLITCLICSPSVHCGTRPS 27
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -3
Query: 102 VAL-RCGSGGGHLTS 61
VAL RC GGG L+S
Sbjct: 4 VALGRCAGGGGRLSS 18
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -3
Query: 102 VAL-RCGSGGGHLTS 61
VAL RC GGG L+S
Sbjct: 4 VALGRCAGGGGRLSS 18
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -3
Query: 102 VAL-RCGSGGGHLTS 61
VAL RC GGG L+S
Sbjct: 4 VALGRCAGGGGRLSS 18
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.0 bits (42), Expect = 9.0
Identities = 10/15 (66%), Positives = 11/15 (73%), Gaps = 1/15 (6%)
Frame = -3
Query: 102 VAL-RCGSGGGHLTS 61
VAL RC GGG L+S
Sbjct: 4 VALGRCAGGGGRLSS 18
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 9.0
Identities = 7/30 (23%), Positives = 15/30 (50%)
Frame = -1
Query: 128 YSFAKTARGSRCAAVAAGATSHHRFDSEXH 39
Y+ + + GSR + ++ H R++ H
Sbjct: 210 YAISSNSLGSRSRSFQRTSSCHSRYEDSRH 239
>AB207270-1|BAE72137.1| 429|Apis mellifera broad-complex protein.
Length = 429
Score = 21.0 bits (42), Expect = 9.0
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 77 PPLPQRSATPAQFS 118
PPL ATP FS
Sbjct: 199 PPLNNNDATPTDFS 212
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,130
Number of Sequences: 438
Number of extensions: 3471
Number of successful extensions: 18
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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