Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_M22
         (383 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528     47   6e-06
07_03_0802 - 21614891-21615195,21615637-21615823,21615939-216161...    47   6e-06
05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471     45   2e-05
10_08_0692 + 19918746-19919072,19919419-19919781,19919841-199199...    27   3.8  
10_08_0713 + 20077967-20078290,20078434-20078814                       27   5.1  
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043...    26   8.9  
08_02_0797 + 21307534-21307639,21307907-21308988,21309385-213094...    26   8.9  

>11_04_0100 + 13465369-13465371,13465464-13465647,13466506-13466528
          Length = 69

 Score = 46.8 bits (106), Expect = 6e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = +2

Query: 113 RRKDAKSRQNKRRTLQNVKFKASTAQGFPATPWLITDKEKAEKLKQSLPPGLQVKEV 283
           RRKDA+S + KR T   VKFK   ++        + D +KA KLKQSLPPGL V+EV
Sbjct: 16  RRKDARSVRIKR-TKDAVKFKVRCSKYLYTL--CVFDADKANKLKQSLPPGLTVQEV 69


>07_03_0802 -
           21614891-21615195,21615637-21615823,21615939-21616154,
           21616669-21616872,21617336-21617569,21617670-21617763,
           21618844-21618890,21619293-21619309,21620183-21620459
          Length = 526

 Score = 46.8 bits (106), Expect = 6e-06
 Identities = 29/57 (50%), Positives = 36/57 (63%)
 Frame = +2

Query: 113 RRKDAKSRQNKRRTLQNVKFKASTAQGFPATPWLITDKEKAEKLKQSLPPGLQVKEV 283
           RRKDA+S + KR T   VKFK   ++        + D +KA KLKQSLPPGL V+EV
Sbjct: 46  RRKDARSVRIKR-TKDAVKFKVRCSKYLYTL--CVFDADKANKLKQSLPPGLTVQEV 99


>05_06_0013 + 24852262-24852264,24852717-24852900,24853449-24853471
          Length = 69

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 28/57 (49%), Positives = 36/57 (63%)
 Frame = +2

Query: 113 RRKDAKSRQNKRRTLQNVKFKASTAQGFPATPWLITDKEKAEKLKQSLPPGLQVKEV 283
           RRKDA+S + KR +   VKFK   ++        + D +KA KLKQSLPPGL V+EV
Sbjct: 16  RRKDARSVRIKR-SKDAVKFKVRCSRYLYTL--CVHDTDKANKLKQSLPPGLTVQEV 69


>10_08_0692 +
           19918746-19919072,19919419-19919781,19919841-19919977,
           19920298-19920304
          Length = 277

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +2

Query: 11  TPLTAAWLENYSVFNTARAETQHDINTTF*LNGRRRKDAKS 133
           TPL AAWLE +   + A+ E   DI     L   R+  A++
Sbjct: 190 TPLLAAWLERFDELDAAK-EAMPDIGRLVELEKMRQAQAQA 229


>10_08_0713 + 20077967-20078290,20078434-20078814
          Length = 234

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +2

Query: 11  TPLTAAWLENYSVFNTARAETQ 76
           TPL AAWLE +   + A+A  Q
Sbjct: 190 TPLLAAWLERFGELDAAKAVLQ 211


>10_07_0063 -
           12502305-12503361,12503567-12503668,12504251-12504378,
           12504653-12504764,12504876-12504927,12505260-12505517,
           12505943-12506079,12506296-12506606
          Length = 718

 Score = 26.2 bits (55), Expect = 8.9
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +2

Query: 104 NGRRRKDAKSRQNKRRTLQNVKFKASTAQGFPATPWLITDKEKAEKLKQSLPPG 265
           N R R+  ++++NK +   N+  K+S A     T    T +++AEK+  SL  G
Sbjct: 325 NERMRRLNRNKENKSKGQDNMNKKSSQAVFPQHTVTTNTVQKRAEKIIPSLQHG 378


>08_02_0797 +
           21307534-21307639,21307907-21308988,21309385-21309432,
           21309705-21310217
          Length = 582

 Score = 26.2 bits (55), Expect = 8.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -2

Query: 160 LQGSSFILTXFGVFPPSAVKLKSRVDIVLSFSAGSVEDGIVFKPGSCQR 14
           L  + F+L+ FG +PP    L+  V         S+ DG    PG  QR
Sbjct: 336 LSAAMFVLSDFGRYPPDVANLRKDVIAPYKHVVPSLGDG--DSPGFEQR 382


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,199,226
Number of Sequences: 37544
Number of extensions: 111478
Number of successful extensions: 286
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 285
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 636799876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)