Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M17
(470 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0339 - 22400534-22400647,22401264-22401398,22401491-224015... 95 2e-20
08_02_1576 + 27965862-27965864,27965952-27966026,27966113-279662... 95 3e-20
11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,249... 58 4e-09
07_02_0028 + 11964941-11964991,11965259-11966101,11966249-119665... 32 0.27
03_05_0586 - 25875703-25876332,25876426-25876713,25877064-258771... 31 0.62
12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525 30 0.82
05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422 30 1.1
11_04_0025 + 12382485-12382823,12382835-12382894,12382960-123830... 29 1.4
04_03_0819 + 20018496-20019487,20019587-20019721,20019834-200199... 29 1.9
06_03_1117 + 27750291-27750338,27751360-27751812,27751987-277521... 29 2.5
02_02_0584 - 11853149-11853573,11853673-11853787,11853868-118539... 29 2.5
10_01_0146 - 1719997-1720386,1721498-1721515 28 3.3
03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635 28 4.4
12_01_0864 - 8205371-8205913,8206304-8206452,8206677-8206737,820... 27 7.6
04_03_0916 + 20794240-20794246,20794585-20796545 27 7.6
03_06_0766 - 36106116-36106230,36106598-36106716,36106880-361069... 27 7.6
03_06_0576 + 34832900-34832911,34833006-34833122,34833752-348338... 27 7.6
>09_06_0339 -
22400534-22400647,22401264-22401398,22401491-22401565,
22401646-22401648
Length = 108
Score = 95.5 bits (227), Expect = 2e-20
Identities = 44/73 (60%), Positives = 58/73 (79%)
Frame = +2
Query: 134 RDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 313
++K+NN VLFD+ TY KL EVP+YK ITP+V+SERL++ GSLARRA+ +L ++GLI+ V
Sbjct: 34 KEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAMKDLMDRGLIRMV 93
Query: 314 VQHHGQVIYTRAT 352
H Q IYTRAT
Sbjct: 94 SVHCSQQIYTRAT 106
>08_02_1576 +
27965862-27965864,27965952-27966026,27966113-27966247,
27967080-27967193
Length = 108
Score = 95.1 bits (226), Expect = 3e-20
Identities = 44/73 (60%), Positives = 57/73 (78%)
Frame = +2
Query: 134 RDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELREKGLIKQV 313
++K+NN VLFD+ TY KL EVP+YK ITP+V+SERL++ GSLARRA+ +L +GLI+ V
Sbjct: 34 KEKVNNSVLFDQATYDKLLSEVPKYKQITPSVLSERLRINGSLARRAINDLMTRGLIRMV 93
Query: 314 VQHHGQVIYTRAT 352
H Q IYTRAT
Sbjct: 94 SVHSSQQIYTRAT 106
>11_01_0334 + 2495275-2495433,2495553-2495661,2496311-2496378,
2496476-2496577,2496853-2497003,2497173-2497222,
2497432-2497557,2497761-2497863,2498104-2498204,
2498540-2498677,2498768-2498911,2499028-2499103,
2499224-2499309,2499432-2499560,2500572-2500674,
2500776-2500843,2500912-2501013,2501432-2501527,
2501723-2501848,2502152-2502254,2502427-2502569,
2503017-2503154,2503248-2503391,2503535-2503610,
2503883-2503968,2504135-2504212,2505180-2505254,
2505362-2505496,2506240-2506272,2507886-2507905,
2508570-2508666,2508899-2509000,2510612-2510725
Length = 1126
Score = 58.0 bits (134), Expect = 4e-09
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 134 RDKLNNQVLFDKPTYXKLYKEVPQYKLITPAVVSERLK 247
++K+NN VLFDK TY KL EVP+YK ITP+V+SERL+
Sbjct: 968 KEKVNNSVLFDKATYDKLLSEVPKYKQITPSVLSERLR 1005
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/35 (51%), Positives = 25/35 (71%)
Frame = +2
Query: 248 VRGSLARRALIELREKGLIKQVVQHHGQVIYTRAT 352
+ GSLAR+A+ +L +G I+ V H Q+IYTRAT
Sbjct: 1090 INGSLARQAIKDLESRGAIRVVSVHSSQLIYTRAT 1124
>07_02_0028 +
11964941-11964991,11965259-11966101,11966249-11966560,
11966640-11967073,11967500-11967941
Length = 693
Score = 31.9 bits (69), Expect = 0.27
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 215 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 361
+TPAV E+ + + AR+ L + RE I+ +QH+ Q+++ +K D
Sbjct: 613 LTPAVYLEQHRFKLEKARQRLTDHRECQNIEATIQHNQQLVHVEKSKLD 661
>03_05_0586 -
25875703-25876332,25876426-25876713,25877064-25877194,
25877299-25877812
Length = 520
Score = 30.7 bits (66), Expect = 0.62
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 22 PNSGREGFGQTASKNTEXXGRIRWRQSQEEEVVQRKSS*QVEQPGV 159
P+ R G G + + G+ +WR+ +EEE Q+K + E+ V
Sbjct: 341 PHLSRGGRGGESEERRRERGKGKWREEEEEEEEQQKGQEEEEEEQV 386
>12_01_0890 + 8591718-8591720,8591809-8591919,8592001-8592525
Length = 212
Score = 30.3 bits (65), Expect = 0.82
Identities = 16/49 (32%), Positives = 29/49 (59%)
Frame = +2
Query: 215 ITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 361
ITPAV E+ + + A++ L + RE+ I+ +Q + Q++Y +K D
Sbjct: 116 ITPAVYLEQHQFKLERAKQRLADRRERMDIEATIQANRQLVYEEKSKLD 164
>05_03_0438 - 14019214-14019723,14019876-14019918,14023196-14023422
Length = 259
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +2
Query: 212 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 361
++TPA E+ + + A++ L+E RE+ I+ +Q + Q+++ +K D
Sbjct: 167 VLTPAAYFEQHQFKLEKAKQRLVERRERKEIEATIQANRQLVHEEKSKLD 216
>11_04_0025 +
12382485-12382823,12382835-12382894,12382960-12383073,
12383187-12383837
Length = 387
Score = 29.5 bits (63), Expect = 1.4
Identities = 13/50 (26%), Positives = 30/50 (60%)
Frame = +2
Query: 212 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 361
+ITPA+ E+ + + A++ + + RE+ +I+ +Q + Q+++ K D
Sbjct: 237 IITPAIYLEQHQFKLEKAQQRIADRRERKVIEATIQANRQLVHEEKAKLD 286
>04_03_0819 +
20018496-20019487,20019587-20019721,20019834-20019978,
20020135-20020416,20020649-20020910,20021028-20021224,
20021315-20021425,20022341-20022392,20022442-20022584,
20023121-20023210,20023300-20023800,20024108-20024176,
20024866-20025011,20025475-20025530,20026140-20026286,
20027405-20027530,20027608-20027876,20028026-20028127
Length = 1274
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/58 (34%), Positives = 28/58 (48%)
Frame = +3
Query: 3 PTSXLPAQLRTRRLRPNSLKKHRXXRKDPVAAKPRRRSGPKEKFVTS*TTRCCLINPH 176
P + L LR+ RL SL + R R + A PRRR G + + + T+ C L H
Sbjct: 33 PAAPLLLLLRSDRLYSLSLSRRRGPRLR-LLASPRRRHGRRRRALLLSTSGCALRLTH 89
>06_03_1117 +
27750291-27750338,27751360-27751812,27751987-27752161,
27752227-27752551,27752705-27752786,27752820-27752889,
27753341-27753420,27753514-27753750
Length = 489
Score = 28.7 bits (61), Expect = 2.5
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 40 GFGQTASKNTEXXGRIRWRQSQEEEVVQRKSS*QVEQPG 156
GFG S N+ +RWR + +++ Q Q ++PG
Sbjct: 427 GFGIAISANSMLVEYLRWRSRRNQQLAQTVDDGQRQEPG 465
>02_02_0584 -
11853149-11853573,11853673-11853787,11853868-11853981,
11854049-11854108,11854265-11854600,11854681-11854724,
11854776-11855507,11855736-11855921,11856012-11856153,
11856250-11856300
Length = 734
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/50 (30%), Positives = 29/50 (58%)
Frame = +2
Query: 212 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 361
++TPAV E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 599 ILTPAVYLEQHQFKLKKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 648
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 28.3 bits (60), Expect = 3.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 24 QLRTRRLRPNSLKKHRXXRKDPVAAKPRRRS 116
QLR ++P+ + R R +P +PRRR+
Sbjct: 75 QLRAAEMQPDDGGQRRRRRSEPATTQPRRRA 105
>03_01_0620 - 4566616-4567374,4567455-4567977,4568106-4568635
Length = 603
Score = 27.9 bits (59), Expect = 4.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -3
Query: 309 CLMRPFSLSSMSALLAREPRTFNL 238
C +RP S +++ AL+AR PR L
Sbjct: 217 CYVRPVSFAALEALVARSPRLTRL 240
>12_01_0864 -
8205371-8205913,8206304-8206452,8206677-8206737,
8206815-8206917,8207197-8207492
Length = 383
Score = 27.1 bits (57), Expect = 7.6
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = +2
Query: 212 LITPAVVSERLKVRGSLARRALIELREKGLIKQVVQHHGQVIYTRATKGD 361
++TP V E+ + + A+ L E RE+ I+ +Q + Q+++ +K D
Sbjct: 280 ILTPGVYLEQHQFKLEKAKLRLAERRERKDIEATIQANRQLVHEEKSKLD 329
>04_03_0916 + 20794240-20794246,20794585-20796545
Length = 655
Score = 27.1 bits (57), Expect = 7.6
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Frame = -1
Query: 233 IRQQV*LACTVGLPCTVXH-MWVYQTTPGCSTCHELFLWTTSSSWLCRHRI 84
I Q + L +G C + VY+ P S H+LF T+ +W R+ I
Sbjct: 399 IIQHINLVKLIGFCCEGGRRLLVYEHMPNRSLDHQLFQTNTTLTWNIRYEI 449
>03_06_0766 -
36106116-36106230,36106598-36106716,36106880-36106960,
36107062-36107118,36107350-36107373,36107810-36107909,
36107983-36108053,36108132-36108236,36108674-36108847,
36109406-36109555,36109701-36109871,36109968-36110024,
36110107-36110142,36110165-36110357,36110439-36110578,
36110960-36111166,36111442-36111498,36111711-36111809,
36112289-36112408,36112865-36113032,36113450-36113510,
36113611-36113720,36114132-36114263,36114344-36114511,
36115118-36115182,36115242-36115372,36115450-36115487,
36116272-36116373,36116480-36116537,36117479-36117580,
36117695-36117909,36118158-36118307,36118699-36118858,
36118984-36119042,36119287-36119443,36119536-36119681,
36121376-36121648,36122889-36122891
Length = 1457
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 173 TYXKLYKEVPQYKLITPAVVSERLKVRGSLARRALIELR 289
++ + Y + YK + A+++ + RG +ARR L EL+
Sbjct: 767 SHCRCYLVLSNYKRMMKAIITTQCAWRGRVARRELRELK 805
>03_06_0576 +
34832900-34832911,34833006-34833122,34833752-34833810,
34833901-34833960,34834197-34834250,34834332-34834380,
34834493-34834540,34834889-34834954,34835591-34835641,
34835732-34835851,34835921-34836005,34836428-34836509,
34836666-34836774,34837005-34837051,34837131-34837188,
34839114-34839220,34839700-34839765,34839833-34839879,
34839977-34840042,34840146-34840243,34840344-34840469,
34840551-34840835,34840920-34840985,34841079-34841228
Length = 675
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 248 VRGSLARRALIELREKGLIKQVVQHHGQVIYT 343
+RG +RAL +R+ G I++VVQ+ Q Y+
Sbjct: 239 IRGIGGQRALKLIRQHGYIEEVVQNLSQTRYS 270
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,917,927
Number of Sequences: 37544
Number of extensions: 213282
Number of successful extensions: 517
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 517
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 955200320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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