Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M16
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 241 1e-62
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 223 2e-57
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 198 7e-50
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 171 1e-41
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 163 2e-39
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 139 5e-32
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 135 8e-31
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 135 1e-30
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 133 3e-30
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 128 9e-29
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 123 3e-27
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 103 5e-21
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 89 9e-17
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 87 3e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 84 2e-15
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 78 2e-13
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 69 1e-10
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 61 3e-08
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 56 6e-07
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 56 6e-07
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 55 2e-06
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 55 2e-06
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 53 5e-06
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 49 1e-04
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 48 3e-04
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 46 6e-04
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 46 6e-04
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 45 0.002
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 44 0.002
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 42 0.017
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 39 0.091
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 37 0.37
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 35 1.5
UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;... 35 2.0
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.4
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 3.4
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 6.0
UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;... 33 7.9
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 7.9
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 241 bits (590), Expect = 1e-62
Identities = 113/152 (74%), Positives = 134/152 (88%)
Frame = +3
Query: 189 RATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 368
+ TKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDK
Sbjct: 53 QGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDK 112
Query: 369 LRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 548
LR MVKKWQTLIE ++DV TTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 113 LRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMT 172
Query: 549 EIITRDVTNSELREVVNKLIPDSIAKDIEKAC 644
II R++T+++L+ VV KL+PDSIAKDIEKAC
Sbjct: 173 AIIKREITSTDLKGVVEKLLPDSIAKDIEKAC 204
Score = 40.7 bits (91), Expect = 0.030
Identities = 15/16 (93%), Positives = 16/16 (100%)
Frame = +1
Query: 91 IVDPFTRKDWYDVKAP 138
+VDPFTRKDWYDVKAP
Sbjct: 21 VVDPFTRKDWYDVKAP 36
Score = 35.9 bits (79), Expect = 0.85
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 140 SMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 232
+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 37 NMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 223 bits (546), Expect = 2e-57
Identities = 111/160 (69%), Positives = 129/160 (80%)
Frame = +3
Query: 174 LSTVPRATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 353
L T + TKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 354 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 533
LT DK+ MVKKWQT+IEA++DV TTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 534 RKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
RKKM EI+TR+V ++L+EVVNKLIPDSI KDIEKAC I
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSI 204
Score = 37.9 bits (84), Expect = 0.21
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +1
Query: 91 IVDPFTRKDWYDVKAP 138
+VDPF++KDWYDVKAP
Sbjct: 21 VVDPFSKKDWYDVKAP 36
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 198 bits (484), Expect = 7e-50
Identities = 98/155 (63%), Positives = 120/155 (77%)
Frame = +3
Query: 189 RATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 368
+ TKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDK
Sbjct: 447 QGTKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDK 504
Query: 369 LRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 548
LR +V+KWQTLIEA++DV TTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM
Sbjct: 505 LRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMR 564
Query: 549 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
EI+T T+ +L+E+V K IP+SI ++IEKA I
Sbjct: 565 EIMTNMATSCDLKELVKKFIPESIGREIEKATSSI 599
Score = 34.3 bits (75), Expect = 2.6
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +1
Query: 97 DPFTRKDWYDVKAP 138
DPF +KDWYD+KAP
Sbjct: 417 DPFAKKDWYDIKAP 430
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 171 bits (416), Expect = 1e-41
Identities = 83/152 (54%), Positives = 111/152 (73%)
Frame = +3
Query: 198 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 377
K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR
Sbjct: 55 KNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRS 112
Query: 378 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 557
+V+KWQ+LIEAN+ V TTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII
Sbjct: 113 LVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEII 172
Query: 558 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
R+ + L+++ NKLIP+ I ++IEKA GI
Sbjct: 173 QREASTCTLQQLTNKLIPEVIGREIEKATQGI 204
Score = 32.7 bits (71), Expect = 7.9
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +1
Query: 97 DPFTRKDWYDVKAP 138
DPF RKDWY +KAP
Sbjct: 22 DPFARKDWYGIKAP 35
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 163 bits (397), Expect = 2e-39
Identities = 81/144 (56%), Positives = 110/144 (76%)
Frame = +3
Query: 189 RATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 368
+ TK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DK
Sbjct: 51 QGTKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDK 108
Query: 369 LRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 548
LR ++ KW TLIE +DV TTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM
Sbjct: 109 LRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMV 168
Query: 549 EIITRDVTNSELREVVNKLIPDSI 620
+I+T V++++L+ VV+ LI S+
Sbjct: 169 DILTETVSSNDLKTVVDYLIGVSL 192
Score = 33.1 bits (72), Expect = 6.0
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 94 VDPFTRKDWYDVKAP 138
VDPFTRK+WY V+AP
Sbjct: 16 VDPFTRKEWYVVRAP 30
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 139 bits (337), Expect = 5e-32
Identities = 72/163 (44%), Positives = 101/163 (61%), Gaps = 3/163 (1%)
Frame = +3
Query: 174 LSTVPRATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 353
L T +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 354 LTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 524
+T D+L M++KWQTLIEA +D T DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 525 RAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
RAIR+K+ IT + + E LI + K IEK I
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLIGEDYTKKIEKETKNI 210
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 135 bits (327), Expect = 8e-31
Identities = 66/153 (43%), Positives = 101/153 (66%)
Frame = +3
Query: 195 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 374
T +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 52 TVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIF 110
Query: 375 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 554
M+KK QTLIE ++ + DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI
Sbjct: 111 GMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEI 170
Query: 555 ITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
+ ++V+ + +++ +S+AK+I KA I
Sbjct: 171 VLKEVSKKSITQLLGFFNQESLAKEIGKATRTI 203
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 135 bits (326), Expect = 1e-30
Identities = 70/146 (47%), Positives = 98/146 (67%)
Frame = +3
Query: 195 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 374
T+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR
Sbjct: 56 TRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLR 113
Query: 375 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEI 554
+VKKW TLIE ++DV TTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +
Sbjct: 114 SIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNL 173
Query: 555 ITRDVTNSELREVVNKLIPDSIAKDI 632
IT++ + EL + V+ L + K +
Sbjct: 174 ITKEAASRELTQFVDYLKKTNFQKKL 199
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 133 bits (322), Expect = 3e-30
Identities = 64/116 (55%), Positives = 82/116 (70%)
Frame = +3
Query: 282 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCI 461
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DV TTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 462 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 629
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQD 121
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 128 bits (310), Expect = 9e-29
Identities = 56/155 (36%), Positives = 99/155 (63%)
Frame = +3
Query: 189 RATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 368
+ T+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK
Sbjct: 53 QGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDK 112
Query: 369 LRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 548
+ +++KW T +E ++V T DGY +R+F + FT + Q + CYA+ V+ +R ++
Sbjct: 113 MANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRIT 172
Query: 549 EIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
++I R ++ +++E V+ L + ++ + + C+ I
Sbjct: 173 KMIKRRLSKVQIKEAVSLLTRNVLSDALVRRCNPI 207
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 123 bits (297), Expect = 3e-27
Identities = 72/154 (46%), Positives = 98/154 (63%), Gaps = 1/154 (0%)
Frame = +3
Query: 195 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 374
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 375 WMVKKWQTLIEANIDVXTTDGYVLRVFCIGF-TNKDSLSQRKTCYAQHTQVRAIRKKMCE 551
V KWQ ++EA+ DV T D Y+L +FC+G+ TN + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 552 IITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
I+ D ++L+EV+NKL+PD++ KD+EKAC I
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGKDVEKACQFI 187
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 103 bits (246), Expect = 5e-21
Identities = 51/139 (36%), Positives = 84/139 (60%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 582 LREVVNKLIPDSIAKDIEK 638
+++++ KL +++ K IE+
Sbjct: 133 VQKIMKKLANETVGKRIEE 151
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 89.0 bits (211), Expect = 9e-17
Identities = 45/149 (30%), Positives = 81/149 (54%)
Frame = +3
Query: 207 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 386
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 387 KWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 566
KW TLIE ++ T DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 567 VTNSELREVVNKLIPDSIAKDIEKACHGI 653
N ++++ ++++ I + IE C I
Sbjct: 172 GINMDIKDFIHRIYSLKIYEKIEINCSKI 200
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/136 (33%), Positives = 74/136 (54%)
Frame = +3
Query: 198 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 377
++A++ + RV+EV+L DL + KF L + V L NFHGMD+T K
Sbjct: 53 RVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGS 112
Query: 378 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 557
+ +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R + E +
Sbjct: 113 LFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETL 172
Query: 558 TRDVTNSELREVVNKL 605
++ + +V KL
Sbjct: 173 HNELGKVSIPVLVTKL 188
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 84.2 bits (199), Expect = 2e-15
Identities = 47/152 (30%), Positives = 81/152 (53%)
Frame = +3
Query: 198 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 377
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 378 MVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 557
+++K++T+I+A++D T DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 558 TRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
T + + ++ + + I +I + C I
Sbjct: 169 TDACEANGVEQLCKDFVDEKIENEIVEKCKQI 200
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 77.8 bits (183), Expect = 2e-13
Identities = 43/72 (59%), Positives = 53/72 (73%)
Frame = +3
Query: 174 LSTVPRATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 353
L T + TKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 354 LTTDKLRWMVKK 389
LT+DK+ ++K
Sbjct: 102 LTSDKITSQIRK 113
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/41 (70%), Positives = 35/41 (85%)
Frame = +3
Query: 531 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGI 653
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC I
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSI 151
Score = 35.9 bits (79), Expect = 0.85
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +1
Query: 91 IVDPFTRKDWYDVKAP 138
+VDPF++KDWYDV AP
Sbjct: 21 VVDPFSKKDWYDVNAP 36
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 68.9 bits (161), Expect = 1e-10
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +3
Query: 174 LSTVPRATKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 353
L T + TKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 354 LTTD 365
L+ D
Sbjct: 105 LSCD 108
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 60.9 bits (141), Expect = 3e-08
Identities = 41/139 (29%), Positives = 71/139 (51%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 582 LREVVNKLIPDSIAKDIEK 638
E +N+++ +A +I K
Sbjct: 153 FTEFINEVVTGKVASEIYK 171
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 56.4 bits (130), Expect = 6e-07
Identities = 42/139 (30%), Positives = 66/139 (47%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
I+ +V T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 582 LREVVNKLIPDSIAKDIEK 638
E V +I D +++ K
Sbjct: 158 FSEYVKYIISDDAPRELSK 176
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 56.4 bits (130), Expect = 6e-07
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Frame = +3
Query: 210 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 389
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 390 WQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 569
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 570 TNSELREVVNKLI----PDSIAKDIEKA 641
+ E + + + +SI + I++A
Sbjct: 143 KECDFDEFIRRCLSISEEESIPEQIKEA 170
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 54.8 bits (126), Expect = 2e-06
Identities = 40/131 (30%), Positives = 68/131 (51%)
Frame = +3
Query: 216 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 395
L GR E ++ +L D ++ K L V G + G +LTTD +R +VK+
Sbjct: 43 LVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQT 100
Query: 396 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 575
+ I+AN+DV T DG+V+RV FT K A+ +Q++AIR+ M +I+ + +
Sbjct: 101 SRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASE 151
Query: 576 SELREVVNKLI 608
++ + + I
Sbjct: 152 TDFETFMQEAI 162
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 54.8 bits (126), Expect = 2e-06
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 4/143 (2%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
IE +DV T DGY LRV + FT + + KT +Q RAIR M +I+ ++
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLN 156
Query: 582 ----LREVVNKLIPDSIAKDIEK 638
L+E V +P I K+ +K
Sbjct: 157 FVQFLQECVLGKVPAEIYKNAKK 179
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 53.2 bits (122), Expect = 5e-06
Identities = 39/131 (29%), Positives = 63/131 (48%)
Frame = +3
Query: 216 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 395
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 396 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 575
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 576 SELREVVNKLI 608
S L E++ ++
Sbjct: 149 STLDELIQLMV 159
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 48.8 bits (111), Expect = 1e-04
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 578
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 579 ELREVVNKLIPDSIAKDI 632
E V ++I ++A +I
Sbjct: 158 TFDEFVQEMIFGNLANNI 175
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 47.6 bits (108), Expect = 3e-04
Identities = 38/143 (26%), Positives = 64/143 (44%)
Frame = +3
Query: 216 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 395
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 396 TLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 575
+ I A ++V T DG+ +RV + T + KT IR +M +II
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKE 157
Query: 576 SELREVVNKLIPDSIAKDIEKAC 644
+ E V+ ++ + I C
Sbjct: 158 TPFAEFVHAMLMGGLGSKIYGDC 180
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 46.4 bits (105), Expect = 6e-04
Identities = 35/137 (25%), Positives = 62/137 (45%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 582 LREVVNKLIPDSIAKDI 632
V+ ++ +++ I
Sbjct: 151 FESFVDAIVEGNLSSAI 167
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 46.4 bits (105), Expect = 6e-04
Identities = 32/137 (23%), Positives = 63/137 (45%)
Frame = +3
Query: 222 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 401
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 582 LREVVNKLIPDSIAKDI 632
++++ ++ ++ I
Sbjct: 151 FEQLIDSVVEGRLSSAI 167
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.8 bits (101), Expect = 0.002
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +3
Query: 204 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 383
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 384 KKWQTLIEANIDVXTTDGYVLRVFCIGFTNK 476
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 44.4 bits (100), Expect = 0.002
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 1/149 (0%)
Frame = +3
Query: 210 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 389
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 390 WQTLIEANIDVXTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 566
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 567 VTNSELREVVNKLIPDSIAKDIEKACHGI 653
++ V+ ++ ++K + C I
Sbjct: 152 AKEADFESFVSAMLKGELSKKMFAECKPI 180
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 41.5 bits (93), Expect = 0.017
Identities = 24/93 (25%), Positives = 48/93 (51%)
Frame = +3
Query: 219 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 398
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 399 LIEANIDVXTTDGYVLRVFCIGFTNKDSLSQRK 497
+ +DV T+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 39.1 bits (87), Expect = 0.091
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 1/139 (0%)
Frame = +3
Query: 225 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 401
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 402 IEANIDVXTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 581
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 582 LREVVNKLIPDSIAKDIEK 638
+ + D I I++
Sbjct: 178 IDFIYKICCSDVIGNSIKR 196
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/19 (84%), Positives = 16/19 (84%)
Frame = +3
Query: 597 NKLIPDSIAKDIEKACHGI 653
NKLIPDSI KDIEKAC I
Sbjct: 1 NKLIPDSIGKDIEKACQSI 19
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 35.1 bits (77), Expect = 1.5
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = -3
Query: 466 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 293
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 292 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVALG 185
L + + SV + S R S L F P EA+++A+G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_A7D8P6 Cluster: FAD linked oxidase domain protein; n=3;
Alphaproteobacteria|Rep: FAD linked oxidase domain
protein - Methylobacterium extorquens PA1
Length = 990
Score = 34.7 bits (76), Expect = 2.0
Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 1/85 (1%)
Frame = -1
Query: 333 RAHYVLAHIRRLI*ICGKTFPRQCQLVDQPGKLRKLFPSILPKQFSLPWVRLTSVVPTCL 154
R H V+AH R CG+T+ Q + R+ ++LP F R+ + P+CL
Sbjct: 774 RLHRVIAHEGRRPLCCGRTYLASGQTDRAREEARRTLDTLLP--FVRAGARVVGLEPSCL 831
Query: 153 LLNIERSLDIVP-IFASEWVDNLLL 82
L + L ++P ASE + LL
Sbjct: 832 LTFRDEFLSLLPRAEASELAQSALL 856
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -3
Query: 418 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 254
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 33.9 bits (74), Expect = 3.4
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = -3
Query: 415 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 236
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 235 SKTLPFNPSEAIFVALG-TVDKRGADLPL 152
++ + E +A G T+D+ A + L
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNL 188
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.9 bits (74), Expect = 3.4
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +3
Query: 315 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVXTTDGYVLRVFCIGFTNKDSLSQR 494
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 495 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 632
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 569 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 462
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_Q01HQ6 Cluster: OSIGBa0153E02-OSIGBa0093I20.19 protein;
n=42; Oryza sativa|Rep: OSIGBa0153E02-OSIGBa0093I20.19
protein - Oryza sativa (Rice)
Length = 1752
Score = 32.7 bits (71), Expect = 7.9
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +1
Query: 304 PNMCK-DVMCSATSTAWTSQPISSGGWLKNGRL--SSKPTLM*XQPMDTFYVSSALVSPI 474
P CK + WTS P+++ GW NGR+ + PTL Q + ++ A VS +
Sbjct: 1631 PGKCKLHAWLIIQNRVWTSDPLATRGWQNNGRVPPARTPTLGVAQSVKDWWEMLASVSGV 1690
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 7.9
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 492 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 638
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,340,363
Number of Sequences: 1657284
Number of extensions: 13508508
Number of successful extensions: 38332
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 37065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38311
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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