Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_M15
         (652 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19196-1|AAA53627.1|  341|Drosophila melanogaster eIF-2 alpha-su...   254   6e-68
AF145633-1|AAD38608.1|  341|Drosophila melanogaster eukaryotic t...   254   6e-68
AE014298-2409|AAF48615.1|  341|Drosophila melanogaster CG9946-PA...   254   6e-68
AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p pro...    30   2.4  
AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA...    30   2.4  
AY069137-1|AAL39282.1|  939|Drosophila melanogaster GH14967p pro...    30   3.1  
AE014297-1016|AAF54434.2|  939|Drosophila melanogaster CG12950-P...    30   3.1  
AF216663-1|AAF32293.1| 2263|Drosophila melanogaster guanine-nucl...    29   5.5  
AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family g...    29   5.5  
AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC...    29   5.5  
AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA...    29   5.5  
AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein.      29   5.5  

>L19196-1|AAA53627.1|  341|Drosophila melanogaster eIF-2
           alpha-subunit protein.
          Length = 341

 Score =  254 bits (623), Expect = 6e-68
 Identities = 120/173 (69%), Positives = 139/173 (80%)
 Frame = +1

Query: 133 FINEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGK 312
           F NE+YPE+EDVVMVNV SIAEMGAYVHLL YNNIEGM              NKLIRVGK
Sbjct: 7   FYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGK 66

Query: 313 TEPVVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQL 492
           TEPVVVIRVDKEKGYI LSKRRVS ED+ KCTER+AKAKA+NS+LRHVA++L +E +E+L
Sbjct: 67  TEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKL 126

Query: 493 EELYKKTAWYFEEKYKKKASAYDFFKQAAVDPSVLDECGLHEXTKDVLLANIK 651
           E+LY+KTAW+FE+KY  K  AYD FKQ+  DP+V DEC L   TK+VLL+NIK
Sbjct: 127 EDLYQKTAWHFEKKYNNKTVAYDIFKQSVTDPTVFDECNLEPETKEVLLSNIK 179


>AF145633-1|AAD38608.1|  341|Drosophila melanogaster eukaryotic
           translation initiationfactor 2 Alpha subunit protein.
          Length = 341

 Score =  254 bits (623), Expect = 6e-68
 Identities = 120/173 (69%), Positives = 139/173 (80%)
 Frame = +1

Query: 133 FINEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGK 312
           F NE+YPE+EDVVMVNV SIAEMGAYVHLL YNNIEGM              NKLIRVGK
Sbjct: 7   FYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGK 66

Query: 313 TEPVVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQL 492
           TEPVVVIRVDKEKGYI LSKRRVS ED+ KCTER+AKAKA+NS+LRHVA++L +E +E+L
Sbjct: 67  TEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKL 126

Query: 493 EELYKKTAWYFEEKYKKKASAYDFFKQAAVDPSVLDECGLHEXTKDVLLANIK 651
           E+LY+KTAW+FE+KY  K  AYD FKQ+  DP+V DEC L   TK+VLL+NIK
Sbjct: 127 EDLYQKTAWHFEKKYNNKTVAYDIFKQSVTDPTVFDECNLEPETKEVLLSNIK 179


>AE014298-2409|AAF48615.1|  341|Drosophila melanogaster CG9946-PA
           protein.
          Length = 341

 Score =  254 bits (623), Expect = 6e-68
 Identities = 120/173 (69%), Positives = 139/173 (80%)
 Frame = +1

Query: 133 FINEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKLIRVGK 312
           F NE+YPE+EDVVMVNV SIAEMGAYVHLL YNNIEGM              NKLIRVGK
Sbjct: 7   FYNERYPEIEDVVMVNVLSIAEMGAYVHLLEYNNIEGMILLSELSRRRIRSINKLIRVGK 66

Query: 313 TEPVVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQL 492
           TEPVVVIRVDKEKGYI LSKRRVS ED+ KCTER+AKAKA+NS+LRHVA++L +E +E+L
Sbjct: 67  TEPVVVIRVDKEKGYIDLSKRRVSPEDVEKCTERFAKAKAINSLLRHVADILGFEGNEKL 126

Query: 493 EELYKKTAWYFEEKYKKKASAYDFFKQAAVDPSVLDECGLHEXTKDVLLANIK 651
           E+LY+KTAW+FE+KY  K  AYD FKQ+  DP+V DEC L   TK+VLL+NIK
Sbjct: 127 EDLYQKTAWHFEKKYNNKTVAYDIFKQSVTDPTVFDECNLEPETKEVLLSNIK 179


>AY069518-1|AAL39663.1|  817|Drosophila melanogaster LD23718p
           protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +1

Query: 400 KCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
           + T+R AKAK +   +   ++  ++E S+QL+++YKK
Sbjct: 716 RATKRLAKAKKMAEKIMENSDATNHEKSKQLKKVYKK 752


>AE014298-2316|AAF48557.1|  817|Drosophila melanogaster CG8939-PA
           protein.
          Length = 817

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 13/37 (35%), Positives = 25/37 (67%)
 Frame = +1

Query: 400 KCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
           + T+R AKAK +   +   ++  ++E S+QL+++YKK
Sbjct: 716 RATKRLAKAKKMAEKIMENSDATNHEKSKQLKKVYKK 752


>AY069137-1|AAL39282.1|  939|Drosophila melanogaster GH14967p
           protein.
          Length = 939

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 340 DKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILR 450
           DKE G + +   + S    Y+C   + KA+ +NS +R
Sbjct: 95  DKEPGKLSIQNTQASDSGTYRCRVDFLKAQTINSRIR 131


>AE014297-1016|AAF54434.2|  939|Drosophila melanogaster CG12950-PA
           protein.
          Length = 939

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +1

Query: 340 DKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILR 450
           DKE G + +   + S    Y+C   + KA+ +NS +R
Sbjct: 95  DKEPGKLSIQNTQASDSGTYRCRVDFLKAQTINSRIR 131


>AF216663-1|AAF32293.1| 2263|Drosophila melanogaster
            guanine-nucleotide-exchange-factorTRIO protein.
          Length = 2263

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 331  IRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
            +R   E+  I + K   SA  +     +Y     +N+   H   L   E S+ + + +++
Sbjct: 935  LRKGHEQFQIAIEKTHTSAVQV-----KYRADALINA--NHYDPLSIDEISDDVTKKWQQ 987

Query: 511  TAWYFEEKYKKKASAYDFFKQAAVDPSVLD 600
               Y EE++K   ++ +F+K A    SVLD
Sbjct: 988  LVTYAEERHKLVTASINFYKTAEQVCSVLD 1017


>AF215635-1|AAF25952.1| 2263|Drosophila melanogaster Rho family
            guanine nucleotideexchange factor Trio protein.
          Length = 2263

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 331  IRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
            +R   E+  I + K   SA  +     +Y     +N+   H   L   E S+ + + +++
Sbjct: 935  LRKGHEQFQIAIEKTHTSAVQV-----KYRADALINA--NHYDPLSIDEISDDVTKKWQQ 987

Query: 511  TAWYFEEKYKKKASAYDFFKQAAVDPSVLD 600
               Y EE++K   ++ +F+K A    SVLD
Sbjct: 988  LVTYAEERHKLVTASINFYKTAEQVCSVLD 1017


>AE014296-165|AAN11455.1| 2263|Drosophila melanogaster CG18214-PC,
            isoform C protein.
          Length = 2263

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 331  IRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
            +R   E+  I + K   SA  +     +Y     +N+   H   L   E S+ + + +++
Sbjct: 935  LRKGHEQFQIAIEKTHTSAVQV-----KYRADALINA--NHYDPLSIDEISDDVTKKWQQ 987

Query: 511  TAWYFEEKYKKKASAYDFFKQAAVDPSVLD 600
               Y EE++K   ++ +F+K A    SVLD
Sbjct: 988  LVTYAEERHKLVTASINFYKTAEQVCSVLD 1017


>AE014296-164|AAF47436.3| 2263|Drosophila melanogaster CG18214-PA,
            isoform A protein.
          Length = 2263

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 331  IRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
            +R   E+  I + K   SA  +     +Y     +N+   H   L   E S+ + + +++
Sbjct: 935  LRKGHEQFQIAIEKTHTSAVQV-----KYRADALINA--NHYDPLSIDEISDDVTKKWQQ 987

Query: 511  TAWYFEEKYKKKASAYDFFKQAAVDPSVLD 600
               Y EE++K   ++ +F+K A    SVLD
Sbjct: 988  LVTYAEERHKLVTASINFYKTAEQVCSVLD 1017


>AB035419-1|BAA96093.1| 2263|Drosophila melanogaster Trio protein.
          Length = 2263

 Score = 29.1 bits (62), Expect = 5.5
 Identities = 23/90 (25%), Positives = 42/90 (46%)
 Frame = +1

Query: 331  IRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEELYKK 510
            +R   E+  I + K   SA  +     +Y     +N+   H   L   E S+ + + +++
Sbjct: 935  LRKGHEQFQIAIEKTHTSAVQV-----KYRADALINA--NHYDPLSIDEISDDVTKKWQQ 987

Query: 511  TAWYFEEKYKKKASAYDFFKQAAVDPSVLD 600
               Y EE++K   ++ +F+K A    SVLD
Sbjct: 988  LVTYAEERHKLVTASINFYKTAEQVCSVLD 1017


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,488,983
Number of Sequences: 53049
Number of extensions: 515082
Number of successful extensions: 1406
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1406
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)