Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M15
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical... 198 2e-51
Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical pr... 31 0.71
AY313179-1|AAP79304.1| 782|Caenorhabditis elegans myotubularin-... 31 0.71
AY313177-1|AAP79302.1| 676|Caenorhabditis elegans myotubularin-... 31 0.71
Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical p... 29 3.8
U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.8
AL132858-15|CAB60482.3| 300|Caenorhabditis elegans Hypothetical... 29 3.8
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL033514-16|CAA22103.2| 465|Caenorhabditis elegans Hypothetical... 27 8.7
>AC087079-10|AAK27873.2| 342|Caenorhabditis elegans Hypothetical
protein Y37E3.10 protein.
Length = 342
Score = 198 bits (484), Expect = 2e-51
Identities = 95/178 (53%), Positives = 128/178 (71%)
Frame = +1
Query: 118 RCRVDFINEKYPEVEDVVMVNVRSIAEMGAYVHLLXYNNIEGMXXXXXXXXXXXXXXNKL 297
+CR F ++P+VE+ V+ NV+ IA+MGAYV L YN+ EGM NKL
Sbjct: 2 KCR--FYENQFPDVEETVVANVKMIADMGAYVRLSEYNDKEGMILLSELSRRRIRSVNKL 59
Query: 298 IRVGKTEPVVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYE 477
IRVG++E VVVIRVDK+KGYI LSKRRV +D+ +C ER+A AK VNSILRHVAE + Y
Sbjct: 60 IRVGRSESVVVIRVDKDKGYIDLSKRRVYQKDLKQCDERFANAKMVNSILRHVAEQVGYT 119
Query: 478 TSEQLEELYKKTAWYFEEKYKKKASAYDFFKQAAVDPSVLDECGLHEXTKDVLLANIK 651
T E+LE+LY+KTAW+F+ K K+KA++YD FK+A +P++LDEC + K+ LL +I+
Sbjct: 120 TDEELEDLYQKTAWHFDRKEKRKAASYDAFKKAITEPTILDECDISADIKEKLLEDIR 177
>Z81546-9|CAD45596.2| 782|Caenorhabditis elegans Hypothetical
protein F53A2.8b protein.
Length = 782
Score = 31.1 bits (67), Expect = 0.71
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 322 VVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 501
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 175 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 229
Query: 502 --YKKTAWYFE 528
+++ W E
Sbjct: 230 RGWRRLDWNSE 240
>Z81546-8|CAB04456.1| 676|Caenorhabditis elegans Hypothetical
protein F53A2.8a protein.
Length = 676
Score = 31.1 bits (67), Expect = 0.71
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 322 VVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 501
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 69 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 123
Query: 502 --YKKTAWYFE 528
+++ W E
Sbjct: 124 RGWRRLDWNSE 134
>AY313179-1|AAP79304.1| 782|Caenorhabditis elegans
myotubularin-related protein MTM-6B protein.
Length = 782
Score = 31.1 bits (67), Expect = 0.71
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 322 VVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 501
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 175 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 229
Query: 502 --YKKTAWYFE 528
+++ W E
Sbjct: 230 RGWRRLDWNSE 240
>AY313177-1|AAP79302.1| 676|Caenorhabditis elegans
myotubularin-related protein MTM-6A protein.
Length = 676
Score = 31.1 bits (67), Expect = 0.71
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Frame = +1
Query: 322 VVVIRVDKEKGYIXLSKRRVSAEDIYKCTERYAKAKAVNSILRHVAELLHYETSEQLEEL 501
++VIR + L R S +D+Y+ +R AK +VN V ELL +E E +E++
Sbjct: 69 MLVIRCKHFQVITLLISRDKSCQDLYETLQRAAKPVSVN-----VTELLAFENREPVEDV 123
Query: 502 --YKKTAWYFE 528
+++ W E
Sbjct: 124 RGWRRLDWNSE 134
>Z83233-11|CAB05757.2| 292|Caenorhabditis elegans Hypothetical
protein K06B4.9 protein.
Length = 292
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -2
Query: 441 RVYCFRFCIAFCALVYIFSR-YTTFR*VYVSFFFVHSDY 328
R Y + CI FCA+ Y FS+ + + + SF F +SD+
Sbjct: 124 RNYLWITCIIFCAVCYEFSKCFLKYNPNHWSFEFENSDF 162
>U56961-6|AAK39299.1| 497|Caenorhabditis elegans Hypothetical
protein T19D7.1 protein.
Length = 497
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +2
Query: 440 RSCDM*QSSSIMKLLSNWKNFIK-KQLGTLKRNI 538
R D +SS KLL NWK F+K +++ +L RN+
Sbjct: 154 RKFDNSKSSCQKKLLKNWKIFLKIRKMLSLSRNV 187
>AL132858-15|CAB60482.3| 300|Caenorhabditis elegans Hypothetical
protein Y113G7A.10 protein.
Length = 300
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = -2
Query: 498 FFQLLRSFIMEELCYMSQDRVYC-FRFCIAFCALVYI 391
FFQ FI++ ++ + C + FCI FC + I
Sbjct: 133 FFQFFERFILDNSELFNRLKAVCKYSFCIVFCVFITI 169
>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
protein C27B7.7 protein.
Length = 1471
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +2
Query: 422 KRKQ*TRSCDM*QSSSIMKLLSNWKNFIKKQLGTLKRN 535
+RK R M QSS+I+K L N + F K +L T + N
Sbjct: 2 RRKNFIRRFQMQQSSNILKHLENHEVFCKTELKTCQIN 39
>AL033514-16|CAA22103.2| 465|Caenorhabditis elegans Hypothetical
protein Y75B8A.16 protein.
Length = 465
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/68 (22%), Positives = 30/68 (44%)
Frame = -2
Query: 573 LFEEVICRGFLLIFLFKVPSCFFIKFFQLLRSFIMEELCYMSQDRVYCFRFCIAFCALVY 394
LF+ ++ F+F + F F+L+ I + +S+ R + F + LV
Sbjct: 34 LFKNYEVHNRIVQFIFSLTFAFSCSLFELIIFEIAGVMAPLSRSRCWTFCLSLILITLVV 93
Query: 393 IFSRYTTF 370
+ YT++
Sbjct: 94 VIPVYTSY 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,964,863
Number of Sequences: 27780
Number of extensions: 279507
Number of successful extensions: 810
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 810
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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