Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M12
(655 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p pro... 199 3e-51
AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB... 199 3e-51
AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA... 199 3e-51
X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal prot... 198 4e-51
AY060683-1|AAL28231.1| 284|Drosophila melanogaster GH12395p pro... 29 7.3
AE014297-2850|AAN14364.1| 284|Drosophila melanogaster CG31200-P... 29 7.3
BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p pro... 28 9.6
AY069587-1|AAL39732.2| 639|Drosophila melanogaster LD33388p pro... 28 9.6
AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p pro... 28 9.6
AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB... 28 9.6
AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA... 28 9.6
>BT022718-1|AAY55134.1| 190|Drosophila melanogaster RE74350p
protein.
Length = 190
Score = 199 bits (485), Expect = 3e-51
Identities = 95/138 (68%), Positives = 110/138 (79%)
Frame = +2
Query: 239 MKQIVXNQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVXKWFG 418
M+ I NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKV KWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 419 SKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTXGNSIIEIRNFLGXKY 598
+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+ N++IEIRNFLG KY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 599 ITXVKMAPXVTVVNSPKQ 652
I V+MAP VTVVNS Q
Sbjct: 121 IRRVEMAPGVTVVNSTAQ 138
>AE014134-2010|AAF53049.1| 190|Drosophila melanogaster CG6141-PB,
isoform B protein.
Length = 190
Score = 199 bits (485), Expect = 3e-51
Identities = 95/138 (68%), Positives = 110/138 (79%)
Frame = +2
Query: 239 MKQIVXNQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVXKWFG 418
M+ I NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKV KWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 419 SKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTXGNSIIEIRNFLGXKY 598
+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+ N++IEIRNFLG KY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 599 ITXVKMAPXVTVVNSPKQ 652
I V+MAP VTVVNS Q
Sbjct: 121 IRRVEMAPGVTVVNSTAQ 138
>AE014134-2009|AAF53048.2| 190|Drosophila melanogaster CG6141-PA,
isoform A protein.
Length = 190
Score = 199 bits (485), Expect = 3e-51
Identities = 95/138 (68%), Positives = 110/138 (79%)
Frame = +2
Query: 239 MKQIVXNQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVXKWFG 418
M+ I NQ VKIP + VK+R+VT+ G RG LKR+FKHLA+D+ M + R LKV KWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRSFKHLALDMYMPDKRTLKVEKWFG 60
Query: 419 SKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTXGNSIIEIRNFLGXKY 598
+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+ N++IEIRNFLG KY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 599 ITXVKMAPXVTVVNSPKQ 652
I V+MAP VTVVNS Q
Sbjct: 121 IRRVEMAPGVTVVNSTAQ 138
>X94613-1|CAA64319.1| 190|Drosophila melanogaster ribosomal protein
L9 protein.
Length = 190
Score = 198 bits (484), Expect = 4e-51
Identities = 95/138 (68%), Positives = 109/138 (78%)
Frame = +2
Query: 239 MKQIVXNQKVKIPDGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVXKWFG 418
M+ I NQ VKIP + VK+R+VT+ G RG LKR FKHLA+D+ M + R LKV KWFG
Sbjct: 1 MRTINSNQCVKIPKDIKASVKARVVTITGTRGTLKRTFKHLALDMYMPDKRTLKVEKWFG 60
Query: 419 SKKELAAVRTVCSHVXNMIKGVTKGFQYXMRAVYAHFPINCVTTXGNSIIEIRNFLGXKY 598
+KKELAAVRTVCSH+ NMIKGVT GFQY MRAVYAHFPINCVT+ N++IEIRNFLG KY
Sbjct: 61 TKKELAAVRTVCSHIENMIKGVTFGFQYKMRAVYAHFPINCVTSENNTVIEIRNFLGEKY 120
Query: 599 ITXVKMAPXVTVVNSPKQ 652
I V+MAP VTVVNS Q
Sbjct: 121 IRRVEMAPGVTVVNSTAQ 138
>AY060683-1|AAL28231.1| 284|Drosophila melanogaster GH12395p
protein.
Length = 284
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 498 WKPLVTPLIMFXTCEQTVLTAAS-SFLDPNHXSTFRRRGFTMRMSTAKC 355
W V P+ + T E LT + + NH ++ + +G M +ST KC
Sbjct: 157 WTNWVQPICLEGTSEPETLTNRNLHYTGFNHMASEKGKGLAMTVSTQKC 205
>AE014297-2850|AAN14364.1| 284|Drosophila melanogaster CG31200-PA
protein.
Length = 284
Score = 28.7 bits (61), Expect = 7.3
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -2
Query: 498 WKPLVTPLIMFXTCEQTVLTAAS-SFLDPNHXSTFRRRGFTMRMSTAKC 355
W V P+ + T E LT + + NH ++ + +G M +ST KC
Sbjct: 157 WTNWVQPICLEGTSEPETLTNRNLHYTGFNHMASEKGKGLAMTVSTQKC 205
>BT023113-1|AAY55529.1| 423|Drosophila melanogaster IP03677p
protein.
Length = 423
Score = 28.3 bits (60), Expect = 9.6
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 455 NRLSSRRQAPFWIRTIXQPSGDE-GLPCECQ 366
+R RR+ W RT+ QP G G CECQ
Sbjct: 390 SRCQRRRRWCCWWRTLRQPGGRRPGRLCECQ 420
>AY069587-1|AAL39732.2| 639|Drosophila melanogaster LD33388p
protein.
Length = 639
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 232 PKHEANCXKSESQNPRRAYGPCEIASGDS*RAPRSSQKEL*TLGC*HSHGKPSSP 396
PKH N +++ + A+ IA G+S R PR +KE L K SSP
Sbjct: 27 PKHHLNLPRNDLKKESPAH---HIAKGNSYRVPRHEKKEHQQLSPVKKRVKESSP 78
>AY058785-1|AAL14014.1| 1068|Drosophila melanogaster SD08329p
protein.
Length = 1068
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 232 PKHEANCXKSESQNPRRAYGPCEIASGDS*RAPRSSQKEL*TLGC*HSHGKPSSP 396
PKH N +++ + A+ IA G+S R PR +KE L K SSP
Sbjct: 457 PKHHLNLPRNDLKKESPAH---HIAKGNSYRVPRHEKKEHQQLSPVKKRVKESSP 508
>AE014296-109|AAN11444.1| 1340|Drosophila melanogaster CG17090-PB,
isoform B protein.
Length = 1340
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 232 PKHEANCXKSESQNPRRAYGPCEIASGDS*RAPRSSQKEL*TLGC*HSHGKPSSP 396
PKH N +++ + A+ IA G+S R PR +KE L K SSP
Sbjct: 728 PKHHLNLPRNDLKKESPAH---HIAKGNSYRVPRHEKKEHQQLSPVKKRVKESSP 779
>AE014296-108|AAF47392.2| 1340|Drosophila melanogaster CG17090-PA,
isoform A protein.
Length = 1340
Score = 28.3 bits (60), Expect = 9.6
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +1
Query: 232 PKHEANCXKSESQNPRRAYGPCEIASGDS*RAPRSSQKEL*TLGC*HSHGKPSSP 396
PKH N +++ + A+ IA G+S R PR +KE L K SSP
Sbjct: 728 PKHHLNLPRNDLKKESPAH---HIAKGNSYRVPRHEKKEHQQLSPVKKRVKESSP 779
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,585,700
Number of Sequences: 53049
Number of extensions: 534087
Number of successful extensions: 903
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 870
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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