Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M10
(647 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111; Eukar... 115 9e-25
UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2; Basidio... 87 3e-16
UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S riboso... 85 1e-15
UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27; Viri... 85 1e-15
UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26; Fungi/... 84 2e-15
UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5; Ascomyc... 83 7e-15
UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6; Trichom... 82 1e-14
UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9; Oligohy... 81 2e-14
UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=... 76 6e-13
UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n... 75 1e-12
UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=... 73 5e-12
UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoe... 73 8e-12
UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=... 66 7e-10
UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n... 64 3e-09
UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1; Encepha... 56 6e-07
UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillar... 55 2e-06
UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n... 41 0.022
UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1; ... 41 0.030
UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1; Arabido... 40 0.052
UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza s... 39 0.12
UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal ... 37 0.37
UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4; Pyrobac... 36 0.84
UniRef50_UPI0000ECD41A Cluster: interphotoreceptor matrix proteo... 35 1.5
UniRef50_A5K3G5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.0
UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria n... 35 2.0
UniRef50_UPI00015BAF38 Cluster: phosphoglycerate mutase; n=1; Ig... 33 4.5
UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3; Bacill... 33 6.0
UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like; n... 33 6.0
UniRef50_A0EYN0 Cluster: NADH-ubiquinone oxidoreductase chain 4;... 33 6.0
UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3; Desulf... 33 7.9
>UniRef50_P26373 Cluster: 60S ribosomal protein L13; n=111;
Eukaryota|Rep: 60S ribosomal protein L13 - Homo sapiens
(Human)
Length = 211
Score = 115 bits (277), Expect = 9e-25
Identities = 61/99 (61%), Positives = 73/99 (73%), Gaps = 1/99 (1%)
Frame = +1
Query: 349 PARRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEQERKLATQLRGPLMPVQQ 525
P RRNKS ESLQ NVQR+KEYR++LILFP K KG+++ +E KLATQL GP+MPV+
Sbjct: 100 PRRRNKSTESLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVRN 159
Query: 526 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAXR 642
K AR ITE EKNFKA+ LR AR+ A+L GIRA R
Sbjct: 160 VYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKR 198
Score = 106 bits (255), Expect = 4e-22
Identities = 49/86 (56%), Positives = 59/86 (68%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+ WQR V TWFNQPAR+ RR++ +RPIVRCPTVRYHTKVRAGRG
Sbjct: 16 KDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPIVRCPTVRYHTKVRAGRG 75
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
F+L E+R AG++ ARTIGI+V PR
Sbjct: 76 FSLEELRVAGIHKKVARTIGISVDPR 101
>UniRef50_Q4PAD9 Cluster: 60S ribosomal protein L13; n=2;
Basidiomycota|Rep: 60S ribosomal protein L13 - Ustilago
maydis (Smut fungus)
Length = 209
Score = 87.4 bits (207), Expect = 3e-16
Identities = 40/86 (46%), Positives = 54/86 (62%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+ WQR VK WF+QP + RR+ LRP VRCPT+RY+TK+R+GRG
Sbjct: 16 KDWQRRVKVWFDQPGAKKRRR-TAREAKAAKLGLRPVQLLRPAVRCPTLRYNTKIRSGRG 74
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
FT+ E++AAGL +AR++GI V R
Sbjct: 75 FTIEEVKAAGLGKKYARSVGIPVDHR 100
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/91 (39%), Positives = 50/91 (54%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEQERKLATQLRGPLMPVQQPAP 534
RRNKS ESL++NV+RIK Y+ARL++ PK K K + + A + ++P+
Sbjct: 101 RRNKSEESLKLNVERIKAYQARLVVIPKLTKKNKDKKVDLSNVEAVRQVQSVLPLPAGTE 160
Query: 535 KSVARPITEXEKNFKAYQYLRGARSIAKLVG 627
R IT EK F AY+ LR AR + G
Sbjct: 161 AEKPRAITSEEKEFNAYETLRKARGTHRAAG 191
>UniRef50_UPI0000D563A2 Cluster: PREDICTED: similar to 60S ribosomal
protein L13; n=1; Tribolium castaneum|Rep: PREDICTED:
similar to 60S ribosomal protein L13 - Tribolium
castaneum
Length = 198
Score = 85.4 bits (202), Expect = 1e-15
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+ WQ+ VK WFNQP ++ RRK LRP+V CP+ RY +KVRAGRG
Sbjct: 15 KKWQQKVKLWFNQPMKKLRRKALR-AKKSRQLAPKPTELLRPLVHCPSERYKSKVRAGRG 73
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
FT +E++ AG++ +AR+ G+AV PR
Sbjct: 74 FTFQELKQAGMSDKYARSFGVAVDPR 99
Score = 52.8 bits (121), Expect = 7e-06
Identities = 38/99 (38%), Positives = 50/99 (50%), Gaps = 1/99 (1%)
Frame = +1
Query: 349 PARRNKSVESLQINVQRIKEYRARLILFPKGK-KVLKGEANEQERKLATQLRGPLMPVQQ 525
P RRN+ ES+ N+QR+ EY++RLI P K KVLK + + L V+
Sbjct: 98 PRRRNRCTESIAANIQRLIEYKSRLIFLPDSKNKVLKIDDGKN-----------LNVVKV 146
Query: 526 PAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAXR 642
K A + E EK F+A+ LR AR K GIR R
Sbjct: 147 VPGKVKALKVGEEEKKFEAFVTLRRARCDEKFAGIRMKR 185
>UniRef50_Q9FF90 Cluster: 60S ribosomal protein L13-3; n=27;
Viridiplantae|Rep: 60S ribosomal protein L13-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 206
Score = 85.4 bits (202), Expect = 1e-15
Identities = 40/86 (46%), Positives = 53/86 (61%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+HWQ +VKTWFNQPAR+ RR+ LRP+V T++Y+ KVRAG+G
Sbjct: 14 KHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQTLKYNMKVRAGKG 73
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
FTL E++ AG+ A TIGI+V R
Sbjct: 74 FTLEELKVAGIPKKLAPTIGISVDHR 99
Score = 72.5 bits (170), Expect = 8e-12
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEQERKLATQLRGPLMPVQQPA 531
R+N+S+E LQ NVQR+K Y+A+L++FP + ++V G++ +E ATQ++G MP+
Sbjct: 100 RKNRSLEGLQSNVQRLKTYKAKLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVK 159
Query: 532 PKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAXR 642
+T K FKAY +R R+ A+ G RA R
Sbjct: 160 AAMELVKLTADLKAFKAYDKIRLERTNARHAGARAKR 196
>UniRef50_A1D9H8 Cluster: 60S ribosomal protein L13; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L13 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 243
Score = 84.2 bits (199), Expect = 2e-15
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+ WQR V+ F+QP R++RR++ + LRP+VRCPTV+Y+ +VR GRG
Sbjct: 33 KDWQRRVRVHFDQPGRKHRRREARLAKAAAVAPRPVDK-LRPVVRCPTVKYNRRVRVGRG 91
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
FTL E++ AG+ ART+GIAV R
Sbjct: 92 FTLAELKEAGIPKKLARTVGIAVDHR 117
Score = 41.9 bits (94), Expect = 0.013
Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 20/116 (17%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFPKGK---KVLKGEANEQERKLA-----------T 492
R N S ESL NV R+K+Y+ARLILFP+ K L A+E A T
Sbjct: 118 RVNYSKESLVANVARLKDYKARLILFPRKSGQFKKLDSSADEVNAAKAAFAAEGKTEGYT 177
Query: 493 QLRGPLMPVQQPAPKSVARPITEXEKN------FKAYQYLRGARSIAKLVGIRAXR 642
G + P++ S A +TE +++ AY+ LR RS A+ GIR R
Sbjct: 178 TKLGAIFPIKN---ISAAEAVTEVKRDELPKGEEAAYRRLRETRSEARYKGIREKR 230
>UniRef50_O59931 Cluster: 60S ribosomal protein L13; n=5;
Ascomycota|Rep: 60S ribosomal protein L13 - Candida
albicans (Yeast)
Length = 202
Score = 82.6 bits (195), Expect = 7e-15
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+HWQ V+ F+Q ++ R+Q+ + LRP+VR PTV+Y+ KVRAGRG
Sbjct: 16 KHWQERVRVHFDQAGKKASRRQSRLRKAAKIAPRPIDA-LRPVVRAPTVKYNRKVRAGRG 74
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
FTL E++A G+ P +ARTIGI+V R
Sbjct: 75 FTLAELKAVGIAPKYARTIGISVDHR 100
Score = 58.4 bits (135), Expect = 1e-07
Identities = 38/96 (39%), Positives = 55/96 (57%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEQERKLATQLRGPLMPVQQPAP 534
R+NKS E+ NV R++EY+++L++F K K + + EQ AT PV+QPAP
Sbjct: 101 RQNKSQETFDANVARLQEYKSKLVIFDKKTKASEVASFEQVDVSAT------FPVEQPAP 154
Query: 535 KSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAXR 642
+S R + E+ AY+ LR AR+ K GIR R
Sbjct: 155 ESGLRAVEVPEQT--AYRTLRLARNEKKYKGIREKR 188
>UniRef50_A2EYN3 Cluster: 60S ribosomal protein L13; n=6;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L13
- Trichomonas vaginalis G3
Length = 210
Score = 81.8 bits (193), Expect = 1e-14
Identities = 41/86 (47%), Positives = 50/86 (58%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
++W VKT+F+ PAR RR+ LRPIVRCPTVRY+ K R GRG
Sbjct: 36 KYWYHRVKTYFDDPARAQRRRNARNLRAKKIAPRPAEGPLRPIVRCPTVRYNMKTRLGRG 95
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
FT +E+ AAG +P AR GIAV R
Sbjct: 96 FTPKELVAAGFDPALARFQGIAVDAR 121
>UniRef50_A0CPH3 Cluster: 60S ribosomal protein L13; n=9;
Oligohymenophorea|Rep: 60S ribosomal protein L13 -
Paramecium tetraurelia
Length = 208
Score = 81.4 bits (192), Expect = 2e-14
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+HW RFVKT++NQPA + RR+Q LRP+VR T++Y++ + GRG
Sbjct: 14 KHWTRFVKTFYNQPAAK-RRRQLRRRAQALSASPRPVELLRPVVRGQTIKYNSVQKLGRG 72
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
F+L E++ AGLN FART+GI+V R
Sbjct: 73 FSLIELKEAGLNAAFARTVGISVDHR 98
Score = 44.8 bits (101), Expect = 0.002
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 6/102 (5%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFPK--GKK---VLKGEANEQERKLATQLRGPLMPV 519
RRN + E L NV+R+K Y ++L+L+P+ GK V+K NE Q P +
Sbjct: 99 RRNLNQEELNNNVKRLKAYLSKLVLYPRVAGKPKNGVVKDSTNEVVAHPVAQNTNPEVLT 158
Query: 520 QQPAPKSVARPITEXEKNFK-AYQYLRGARSIAKLVGIRAXR 642
Q PK + E K Y+ LR AK VG++ R
Sbjct: 159 FQRTPKREKATVISKELRAKNVYRRLRQEWYNAKFVGVKEKR 200
>UniRef50_Q57V55 Cluster: 60S ribosomal protein L13, putative; n=7;
Trypanosomatidae|Rep: 60S ribosomal protein L13,
putative - Trypanosoma brucei
Length = 229
Score = 76.2 bits (179), Expect = 6e-13
Identities = 39/80 (48%), Positives = 51/80 (63%)
Frame = +3
Query: 114 VKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLREI 293
VK +FNQPA++ RR++ + LRP V CPTVRY+ K R GRGF+L E+
Sbjct: 38 VKVFFNQPAQKQRRRRLRLLKAKKIFPRPLKA-LRPQVNCPTVRYNMKRRLGRGFSLEEL 96
Query: 294 RAAGLNPVFARTIGIAVXPR 353
+AAG+ P +ARTIGI V R
Sbjct: 97 KAAGVKPRYARTIGIRVDRR 116
Score = 62.9 bits (146), Expect = 6e-09
Identities = 40/102 (39%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKGEANEQERKLATQLR-----GPLMP 516
R+NKS E + INVQR+K Y ++L+LFP KK KG+A E+E K ATQ R +
Sbjct: 117 RKNKSEEGMNINVQRLKTYMSKLVLFPLNRKKPQKGDATEEEVKAATQDRSRYGTAAVGG 176
Query: 517 VQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAXR 642
+ PA + R +TE E K Y++L+ S + R R
Sbjct: 177 LVTPA-REAPRKVTEEESTKKMYKFLKKNHSAVRFFRARNRR 217
>UniRef50_UPI0000DC2213 Cluster: UPI0000DC2213 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC2213 UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 74.9 bits (176), Expect = 1e-12
Identities = 33/47 (70%), Positives = 39/47 (82%)
Frame = +3
Query: 213 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 353
+RPIVRCPTVRYHTKVR GRGF+L EIR AG++ ARTI I+V P+
Sbjct: 13 IRPIVRCPTVRYHTKVRGGRGFSLEEIRLAGIHKKMARTIDISVDPK 59
>UniRef50_A3FQ93 Cluster: 60S ribosomal protein L13, putative; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L13, putative
- Cryptosporidium parvum Iowa II
Length = 207
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/88 (43%), Positives = 51/88 (57%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
++++R++KTW+NQP R+ R+ LRPIV PT RY+ K R GRG
Sbjct: 14 KNYKRWIKTWYNQPGRKQSRRIAR-QKAVAEAGFRPVGMLRPIVHPPTQRYNMKTRLGRG 72
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR*T 359
FTL E+ A G+N A +IGIAV R T
Sbjct: 73 FTLEELSACGINKKAAMSIGIAVDHRRT 100
Score = 42.7 bits (96), Expect = 0.007
Identities = 33/104 (31%), Positives = 48/104 (46%), Gaps = 8/104 (7%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFP-KGKKVLKG-------EANEQERKLATQLRGPL 510
R + S E+ QINV R+K+Y ++L P KGKK KG A E+ + L
Sbjct: 99 RTDLSEETFQINVDRLKKYINGIVLQPRKGKKTKKGFAGIPNDSAREEFKALKNVSHEKA 158
Query: 511 MPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAKLVGIRAXR 642
P++ IT E+ F+A+ LR AK G +A +
Sbjct: 159 FPIKAQTLAVKTHVITPEERKFRAFSTLRKQFIEAKNFGKKATK 202
>UniRef50_O15616 Cluster: 60S ribosomal protein L13; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L13 - Entamoeba
histolytica
Length = 138
Score = 72.5 bits (170), Expect = 8e-12
Identities = 36/86 (41%), Positives = 49/86 (56%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRG 275
+ W+ V TW QP R+ RR Q + L+P V C R++ K+R GRG
Sbjct: 14 KDWRSKVHTWVQQPFRKIRRHQTRVEKAKSVFPATIKS-LKPSVHCMNQRFNYKLRLGRG 72
Query: 276 FTLREIRAAGLNPVFARTIGIAVXPR 353
F+L+E+RAA ++ ARTIGIAV PR
Sbjct: 73 FSLKELRAAKIDKNLARTIGIAVDPR 98
>UniRef50_Q4X4D3 Cluster: 60S ribosomal protein L13, putative; n=5;
Plasmodium|Rep: 60S ribosomal protein L13, putative -
Plasmodium chabaudi
Length = 215
Score = 66.1 bits (154), Expect = 7e-10
Identities = 35/84 (41%), Positives = 46/84 (54%)
Frame = +3
Query: 102 WQRFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFT 281
WQR+V+ FN+ +R +R+ L P+V CPT RY+ K R G+GFT
Sbjct: 17 WQRYVRVDFNKNIKRKQRRLLR-EKRRKQNGGTPIEKLHPVVHCPTQRYNYKTRLGKGFT 75
Query: 282 LREIRAAGLNPVFARTIGIAVXPR 353
L EI+A L P AR+IGI V R
Sbjct: 76 LEEIKAVKLTPSAARSIGIIVDKR 99
>UniRef50_Q4N9B5 Cluster: 60S ribosomal protein L13e, putative; n=4;
Piroplasmida|Rep: 60S ribosomal protein L13e, putative -
Theileria parva
Length = 205
Score = 64.1 bits (149), Expect = 3e-09
Identities = 38/117 (32%), Positives = 58/117 (49%)
Frame = +3
Query: 108 RFVKTWFNQPARRYRRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGRGFTLR 287
RFVK NQ ++ RR+ LRP+V P+ RY+ K+R GRGFTL+
Sbjct: 19 RFVKPVLNQAGKKKRRRLAR-QRKAAASGLTPTGYLRPLVHMPSRRYNYKLRFGRGFTLQ 77
Query: 288 EIRAAGLNPVFARTIGIAVXPR*TQQVC*IIANQCSKNKGIQSASYTVPERQKGAEG 458
E++ AGL AR++G+AV R T + + ++ K S P ++ +G
Sbjct: 78 ELKVAGLGKKVARSVGVAVDHRRTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKG 134
Score = 57.6 bits (133), Expect = 2e-07
Identities = 39/97 (40%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Frame = +1
Query: 355 RRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEA-------NEQERKLA--TQLRGP 507
R NK ESL +NV R+K Y ++L+LFP+ K KG A E+ R LA Q
Sbjct: 100 RTNKCAESLNLNVNRLKTYLSKLVLFPRKKHAKKGFAGLPSDTPREKLRTLALTKQSVKK 159
Query: 508 LMPVQQPAPKSVARPITEXEKNFKAYQYLRGARSIAK 618
+MPV Q K R +TE + + Y LR AR AK
Sbjct: 160 VMPVVQEFVKEPPREVTEKDTSVNVYHKLRVARKAAK 196
>UniRef50_Q8SSC1 Cluster: 60S RIBOSOMAL PROTEIN L13; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L13
- Encephalitozoon cuniculi
Length = 163
Score = 56.4 bits (130), Expect = 6e-07
Identities = 27/47 (57%), Positives = 32/47 (68%)
Frame = +3
Query: 213 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 353
LRPIVRCPT++Y+ R GRGFT E AGL+ AR +GIAV R
Sbjct: 51 LRPIVRCPTIKYNRNERLGRGFTAAECEKAGLDYRHARRLGIAVDLR 97
>UniRef50_Q9AW85 Cluster: 60S ribosomal protein L13; n=1; Guillardia
theta|Rep: 60S ribosomal protein L13 - Guillardia theta
(Cryptomonas phi)
Length = 127
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRY-RRKQNXIXXXXXXXXXXXXXXLRPIVRCPTVRYHTKVRAGR 272
+ W+ V T FNQP + RRK L+P+V+CPT ++TK++ GR
Sbjct: 14 KKWKNLVITNFNQPILKIKRRKIRKNKKKNFLKKAIFYKKLKPLVKCPTRMHNTKIKLGR 73
Query: 273 GFTLREIRAAGLNPVFARTIGIAVXPR 353
GF+++EI+ + + A + GI++ R
Sbjct: 74 GFSIQEIKKSMIKLKTATSYGISIDKR 100
>UniRef50_Q018B3 Cluster: Chromosome 05 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 05 contig 1, DNA
sequence - Ostreococcus tauri
Length = 527
Score = 41.1 bits (92), Expect = 0.022
Identities = 23/46 (50%), Positives = 24/46 (52%)
Frame = -2
Query: 328 VRANTGFNPAALISRRVNPLPARTLVWYRTVGHRTIGRNGPAAGRG 191
VRA T S V P P R L YR VG TIGR+ PA GRG
Sbjct: 398 VRARTMAITRTFNSSSVKPRPRRVLKLYRCVGGCTIGRSAPATGRG 443
>UniRef50_O14377 Cluster: Putative uncharacterized protein; n=1;
Schizosaccharomyces pombe|Rep: Putative uncharacterized
protein - Schizosaccharomyces pombe (Fission yeast)
Length = 70
Score = 40.7 bits (91), Expect = 0.030
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRRK 158
+ WQR+VKTWFNQP R+ RR+
Sbjct: 19 KDWQRYVKTWFNQPGRKLRRQ 39
>UniRef50_Q6LAB9 Cluster: 60S ribosomal protein L13; n=1;
Arabidopsis thaliana|Rep: 60S ribosomal protein L13 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 87
Score = 39.9 bits (89), Expect = 0.052
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = +3
Query: 213 LRPIVRCPTVRYHTKVRAGRGFTLREIRAAGL 308
LRP+V T++Y+ KV +GFTL E++AAG+
Sbjct: 52 LRPVVHGQTLKYNMKVSTXKGFTLEELKAAGI 83
>UniRef50_A2YRI3 Cluster: 60S ribosomal protein L13; n=2; Oryza
sativa|Rep: 60S ribosomal protein L13 - Oryza sativa
subsp. indica (Rice)
Length = 138
Score = 38.7 bits (86), Expect = 0.12
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = +3
Query: 219 PIVRCPTVRYHTKVRAGRGFTLREIR 296
PIV+C T++Y+ K RAGRGF L E++
Sbjct: 47 PIVQCQTLKYNMKSRAGRGFILEELK 72
>UniRef50_UPI00005A0D5A Cluster: PREDICTED: similar to ribosomal
protein L13 isoform 4; n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to ribosomal protein L13 isoform 4 -
Canis familiaris
Length = 102
Score = 37.1 bits (82), Expect = 0.37
Identities = 14/20 (70%), Positives = 16/20 (80%)
Frame = +3
Query: 96 RHWQRFVKTWFNQPARRYRR 155
+ WQR V TWFNQPAR+ RR
Sbjct: 16 KDWQRRVATWFNQPARKIRR 35
>UniRef50_Q8ZWS7 Cluster: 60S ribosomal protein L13; n=4;
Pyrobaculum|Rep: 60S ribosomal protein L13 - Pyrobaculum
aerophilum
Length = 159
Score = 35.9 bits (79), Expect = 0.84
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 216 RPIVRCPTVRYH---TKVRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 353
+P+V+ P H K + GRGF++ E+RA GL+ AR +GI V R
Sbjct: 6 KPLVKTPAKITHGGVVKWKYGRGFSIGELRALGLSVDQARLLGIPVDER 54
>UniRef50_UPI0000ECD41A Cluster: interphotoreceptor matrix
proteoglycan 2; n=3; Gallus gallus|Rep:
interphotoreceptor matrix proteoglycan 2 - Gallus gallus
Length = 1253
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 319 LPERLELLXIPARRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEQ 474
+PE L + + K+VE+ Q+N ++ R R ILFP G K+ E+ EQ
Sbjct: 50 IPEEKTGLSLLTEKKKNVEAEQVNRHLLRR-RKRSILFPSGVKICPDESVEQ 100
>UniRef50_A5K3G5 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 795
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 3/83 (3%)
Frame = +1
Query: 316 YLPERLELLXIPARRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEQERKLATQ 495
Y P+ L++ P+ + +V Q++V + K YR R + KK L E + Q Q
Sbjct: 696 YAPKNLKIYRRPSMISDAVRHTQVDVFKCKSYRGRTAKVLRKKKKLIEELDRQNPGRRQQ 755
Query: 496 LRGPLM---PVQQPAPKSVARPI 555
++G + P P +V+ P+
Sbjct: 756 MKGLTLQGEPSAVPGGAAVSTPV 778
>UniRef50_Q0UNB4 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 365
Score = 34.7 bits (76), Expect = 2.0
Identities = 21/55 (38%), Positives = 29/55 (52%)
Frame = +1
Query: 433 PKGKKVLKGEANEQERKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLR 597
PKGKK K A E+E +A Q+ P+ PV K V ++E +K YQ L+
Sbjct: 297 PKGKKQKKKSAVEEEGSVAPQVAQPVKPVH--IDKFVRPTVSENKKPSSRYQILQ 349
>UniRef50_UPI00015BAF38 Cluster: phosphoglycerate mutase; n=1;
Ignicoccus hospitalis KIN4/I|Rep: phosphoglycerate
mutase - Ignicoccus hospitalis KIN4/I
Length = 416
Score = 33.5 bits (73), Expect = 4.5
Identities = 26/95 (27%), Positives = 40/95 (42%)
Frame = +1
Query: 313 QYLPERLELLXIPARRNKSVESLQINVQRIKEYRARLILFPKGKKVLKGEANEQERKLAT 492
+YLPE EL+ VE +++ E+R ++L +G + + E
Sbjct: 120 RYLPEAEELVKALNEELSEVEGVKVRFYHATEHRVAVVLKGEGLSDEVSDTDPHEVGKPV 179
Query: 493 QLRGPLMPVQQPAPKSVARPITEXEKNFKAYQYLR 597
Q PL P K AR I E F++YQ L+
Sbjct: 180 QEARPLR--DTPEAKKTARVINEI--TFRSYQILK 210
>UniRef50_Q1RS46 Cluster: Polyketide synthase type I; n=3;
Bacillus|Rep: Polyketide synthase type I - Bacillus
amyloliquefaciens
Length = 1917
Score = 33.1 bits (72), Expect = 6.0
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Frame = +1
Query: 388 NVQRIKEYRARLILF-----PKGKKVLKGEANEQERKLATQLRGPLMPVQQPAPKSV 543
N +R+KEY ARL++F P+G L + + + +L LRG L V A SV
Sbjct: 895 NPERLKEYAARLLMFLKDEAPEGSGPLYDKIDTMQNQLEDALRGVLAEVLHVASGSV 951
>UniRef50_Q9LTC0 Cluster: Protein serine/threonine kinase-like;
n=10; Magnoliophyta|Rep: Protein serine/threonine
kinase-like - Arabidopsis thaliana (Mouse-ear cress)
Length = 410
Score = 33.1 bits (72), Expect = 6.0
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +1
Query: 436 KGKKVLKGEANEQERKLATQLRGPLMPVQQPAPKSVARPITEXEKNFKAYQY 591
KGK++L+ A E + T P P+P+S+ TE E+N + + Y
Sbjct: 25 KGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTEREQNLRVFSY 76
>UniRef50_A0EYN0 Cluster: NADH-ubiquinone oxidoreductase chain 4;
n=2; Xenoturbella bocki|Rep: NADH-ubiquinone
oxidoreductase chain 4 - Xenoturbella bocki
Length = 456
Score = 33.1 bits (72), Expect = 6.0
Identities = 41/155 (26%), Positives = 67/155 (43%), Gaps = 5/155 (3%)
Frame = -1
Query: 482 LRSCSLASPFSTFLPFGNSIRRALYSFIL*TLICNDSTDLLRLAGXYSNSNRSGKYWVQS 303
LR + +PFST L + AL+ ++ ++IC TDL L S ++ S + +
Sbjct: 241 LRMAPIFNPFSTLLTNKIIMALALWGTLMTSMICLRQTDLKSLIAYSSVAHMS----MTT 296
Query: 302 CGPNFTKSESSTGAYFSMVPNSWASHY-----RT*RPSCRTWSYGLSFLYXILLSAVSSS 138
S S GAY M+ + S T T + ++ Y IL+ ++
Sbjct: 297 AAILIMTSWSWQGAYNMMIAHGLTSSLLFALANTIYERSHTRNMTITRGYKILMPSMYMW 356
Query: 137 WLVKPSFNKSLPMPCGNVQLGIILFPLPILSVGVL 33
W++ N SLP P N LG I+ +++ VL
Sbjct: 357 WMLAMLSNMSLP-PTMNF-LGEIMMIFSLMNWSVL 389
>UniRef50_Q9YEN9 Cluster: 50S ribosomal protein L13e; n=3;
Desulfurococcales|Rep: 50S ribosomal protein L13e -
Aeropyrum pernix
Length = 80
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 258 VRAGRGFTLREIRAAGLNPVFARTIGIAVXPR 353
VR GRGF+L E+ AGL+ AR +G+ V R
Sbjct: 23 VRRGRGFSLGELAEAGLDAKKARKLGLHVDTR 54
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 634,305,321
Number of Sequences: 1657284
Number of extensions: 12451307
Number of successful extensions: 32805
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32778
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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