Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_M10
         (647 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   2.7  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.7  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    24   3.6  
AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    23   8.3  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    23   8.3  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    23   8.3  

>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = -1

Query: 458 PFSTFLPFGNSIRR-ALYSFIL*TLICNDSTDLLRLAGXYSNSNRSGKYWVQSCGPNFTK 282
           PFS+  PFG    + A+  F +   + N   ++L+        +  G Y ++S    F +
Sbjct: 120 PFSS-KPFGIYYNKGAVKGFYVEKTVPNHEVNMLKGWVSQLQLDTQGAYVIKSEFNQFPE 178

Query: 281 SESSTGAYFSMVPN 240
           + + TG Y +M P+
Sbjct: 179 NNTLTGVYKTMEPS 192


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
 Frame = -1

Query: 458 PFSTFLPFGNSIRR-ALYSFIL*TLICNDSTDLLRLAGXYSNSNRSGKYWVQSCGPNFTK 282
           PFS+  PFG    + A+  F +   + N   ++L+        +  G Y ++S    F +
Sbjct: 120 PFSS-KPFGIYYNKGAVKGFYVEKTVPNHEVNMLKGWVSQLQLDTQGAYVIKSEFNQFPE 178

Query: 281 SESSTGAYFSMVPN 240
           + + TG Y +M P+
Sbjct: 179 NNTLTGVYKTMEPS 192


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = -1

Query: 182 LSFLYXILLSAVSSSWLVKPSFNKSLPMPCGNVQLGIIL 66
           +SF+  I      SSW +K   N S  M C ++ + ++L
Sbjct: 75  VSFIPSIAFPTFRSSWYIKQIGNMSPLMFCSSLAMVLLL 113


>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 13  LFSLPVAKTPTLKMGKGNNMIPNWTFPQGIGKDL 114
           +FSLP A   TL +G G   +    F +G+G D+
Sbjct: 210 IFSLPQAPGRTLLVGAGYIGLECAGFLKGLGYDV 243


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 13  LFSLPVAKTPTLKMGKGNNMIPNWTFPQGIGKDL 114
           +FSLP A   TL +G G   +    F +G+G D+
Sbjct: 186 IFSLPQAPGRTLLVGAGYIGLECAGFLKGLGYDV 219


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = +1

Query: 13  LFSLPVAKTPTLKMGKGNNMIPNWTFPQGIGKDL 114
           +FSLP A   TL +G G   +    F +G+G D+
Sbjct: 183 IFSLPQAPGRTLLVGAGYIGLECAGFLKGLGYDV 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 656,111
Number of Sequences: 2352
Number of extensions: 12627
Number of successful extensions: 25
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)