Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M08
(374 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0665 - 18506221-18506271,18506331-18506401,18507097-185071... 31 0.22
04_03_0489 + 16503325-16503747,16503916-16503978 29 0.90
03_06_0034 + 31197846-31198417,31198562-31198987,31199074-311993... 29 1.2
02_01_0129 - 934865-935152,935241-935490,935965-936105,937175-93... 29 1.6
12_02_1275 - 27482784-27483272 28 2.1
09_04_0361 - 16948740-16948860,16948951-16949018,16949424-169495... 28 2.1
06_03_0685 - 23499779-23500204 28 2.1
04_04_0407 - 24983491-24983575,24983655-24984015,24984367-249844... 28 2.1
01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855 28 2.7
09_06_0293 + 22086359-22086496,22086604-22087213,22087407-220879... 27 3.6
07_01_0547 + 4052618-4052659,4055575-4055741,4055839-4056556,405... 27 3.6
03_05_0057 + 20350971-20351405 27 3.6
01_06_0997 + 33676441-33676758,33678223-33678314,33678443-336785... 27 3.6
01_01_1225 - 9894899-9895333 27 3.6
11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617 27 4.8
09_02_0425 + 9167684-9167803,9168034-9168108,9168200-9168653,916... 27 4.8
05_03_0408 + 13601576-13601748,13601795-13602104,13602597-136028... 27 4.8
12_01_0863 - 8179535-8179774,8180301-8180364,8180505-8180896 27 6.3
04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002 27 6.3
03_04_0163 + 17865529-17865801,17866030-17866102,17866251-17866270 27 6.3
08_02_1499 - 27558872-27559015,27559544-27559666,27560214-275603... 26 8.4
06_03_1407 - 29954374-29954738,29955939-29958558 26 8.4
06_03_0786 - 24579722-24580137,24580518-24580590 26 8.4
04_03_0771 + 19434460-19434987 26 8.4
01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735 26 8.4
01_01_1081 + 8504035-8504461,8504546-8504685 26 8.4
>04_03_0665 -
18506221-18506271,18506331-18506401,18507097-18507169,
18507476-18507805
Length = 174
Score = 31.5 bits (68), Expect = 0.22
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 166 WKWCGLRRDQTGREG 210
W WCGLRR + GR G
Sbjct: 65 WMWCGLRRSKAGRRG 79
>04_03_0489 + 16503325-16503747,16503916-16503978
Length = 161
Score = 29.5 bits (63), Expect = 0.90
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = +3
Query: 243 PAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAH-GSAPPGGGDP 371
PAA A L RLRTP+ + C G P V H G+ P P
Sbjct: 49 PAAAACLRRLRTPATAACLRRAGNPRPPPVSPHKGAGRPAAAAP 92
>03_06_0034 +
31197846-31198417,31198562-31198987,31199074-31199386,
31199510-31199560
Length = 453
Score = 29.1 bits (62), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -3
Query: 261 AERLLPGALRDAPSPE*TFSTCLVSTESTPF 169
++RL+ ALR PSP F++ L +TPF
Sbjct: 39 SQRLVYAALRSLPSPRALFASLLSQLSATPF 69
>02_01_0129 -
934865-935152,935241-935490,935965-936105,937175-937707
Length = 403
Score = 28.7 bits (61), Expect = 1.6
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = +3
Query: 252 NAQLC-RLRTPSVSRCAWAPGLCGGPDVP 335
NA C R P V+ +WAP CGG VP
Sbjct: 75 NAWNCPRNSRPPVAALSWAPARCGGGAVP 103
>12_02_1275 - 27482784-27483272
Length = 162
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 163 QWKWCGLRRDQTGREG 210
+W W GLRR +TGR G
Sbjct: 144 RWVWRGLRRTKTGRRG 159
>09_04_0361 -
16948740-16948860,16948951-16949018,16949424-16949510,
16949626-16949694,16949786-16949854,16949944-16950765
Length = 411
Score = 28.3 bits (60), Expect = 2.1
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 363 PLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERL 250
P + S +GH +HHR + A E DR + L
Sbjct: 44 PFCMLTSSSRGHAEHHRNGGGGGEHRREAGEGDRPKAL 81
>06_03_0685 - 23499779-23500204
Length = 141
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +3
Query: 183 PSRPNRSRRFIPVTGRL*ALPAANAQLCRLRTPSVSRCAWAP 308
P R R RR+ P GR+ LP ++CR R P R P
Sbjct: 42 PPRGGRIRRWPPRRGRIRGLPPLGGRICR-RPPRGGRIHGLP 82
>04_04_0407 -
24983491-24983575,24983655-24984015,24984367-24984406,
24984466-24984468
Length = 162
Score = 28.3 bits (60), Expect = 2.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = -1
Query: 374 AXVTPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER 237
A SG + ++ IRT+ RP T + +R PK +S R +
Sbjct: 31 AKAVKSGTAKKTTKKIRTSVTFHRPKTLKKSRDPKYPRVSTPGRNK 76
>01_03_0217 + 13879259-13879270,13880322-13880683,13880771-13880855
Length = 152
Score = 27.9 bits (59), Expect = 2.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = -1
Query: 374 AXVTPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRER 237
A SG + S+ IRT+ RP T + R PK +S R +
Sbjct: 21 AKAVKSGSIKRKSKKIRTSVTFHRPKTLKKARDPKYPRVSAPGRNK 66
>09_06_0293 +
22086359-22086496,22086604-22087213,22087407-22087938,
22088617-22089151
Length = 604
Score = 27.5 bits (58), Expect = 3.6
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 163 QWKWCGLRRDQTGREG 210
+W W GLRR +TGR G
Sbjct: 558 RWVWRGLRRIKTGRRG 573
>07_01_0547 +
4052618-4052659,4055575-4055741,4055839-4056556,
4056678-4057114,4057241-4057315,4057490-4057673,
4057759-4057854,4057952-4058018,4058556-4058715,
4058808-4059199,4059254-4059300
Length = 794
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/49 (28%), Positives = 20/49 (40%)
Frame = -3
Query: 363 PLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSP 217
P R ++R + + P HS+K S +P LRD SP
Sbjct: 662 PPRPTKARSNSSRSSSKAPGAVHSQKFSKIANSGLNEEMPDILRDDASP 710
>03_05_0057 + 20350971-20351405
Length = 144
Score = 27.5 bits (58), Expect = 3.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 233 LSAPGSKRSALSASDAECFSLCLGAGP 313
LS+P + R AL D EC S AGP
Sbjct: 74 LSSPKAAREALKVHDPECCSRSPSAGP 100
>01_06_0997 +
33676441-33676758,33678223-33678314,33678443-33678540,
33678824-33678979,33679106-33679731,33679826-33679896,
33679987-33680241,33680337-33680454,33680595-33680766,
33680854-33681395
Length = 815
Score = 27.5 bits (58), Expect = 3.6
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 163 QWKWCGLRRDQTGREG 210
+W+W GLRR + GR G
Sbjct: 64 RWEWHGLRRTKAGRRG 79
>01_01_1225 - 9894899-9895333
Length = 144
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = -3
Query: 351 VQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGA 238
V + + H+ H R P+P + K S ++A A R LP A
Sbjct: 55 VVAAHRRHRRHRRSPSPPDA-KRSTADATVAPRFLPAA 91
>11_04_0423 - 17498569-17498932,17499217-17499992,17503439-17504617
Length = 772
Score = 27.1 bits (57), Expect = 4.8
Identities = 19/45 (42%), Positives = 22/45 (48%)
Frame = -3
Query: 369 GHPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGAL 235
GHP AV RE G + R + A+ ADR ERL P AL
Sbjct: 554 GHPPAAV--RETGRHLASLAASLRVPFEFHAAAADRLERLRPAAL 596
>09_02_0425 +
9167684-9167803,9168034-9168108,9168200-9168653,
9168735-9168784
Length = 232
Score = 27.1 bits (57), Expect = 4.8
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 243 PAANAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSA 350
P Q R P++ RC+W P L PA S+
Sbjct: 82 PTRRGQQQRRHAPALRRCSWEPLLALAAAAPARDSS 117
>05_03_0408 +
13601576-13601748,13601795-13602104,13602597-13602834,
13603014-13603364,13603457-13603542,13603685-13603759,
13604241-13604542,13605359-13605622,13606032-13606806
Length = 857
Score = 27.1 bits (57), Expect = 4.8
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +3
Query: 177 WTPSRPNRSRRFIPVTG 227
+ P+RP R RRF+P+ G
Sbjct: 716 YPPNRPTRCRRFVPLPG 732
>12_01_0863 - 8179535-8179774,8180301-8180364,8180505-8180896
Length = 231
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +3
Query: 324 PDVPAHGSAPPGGGDPG 374
P PAHGSA G GD G
Sbjct: 97 PPPPAHGSADDGRGDDG 113
>04_03_0890 + 20576843-20578119,20578563-20578806,20578890-20580002
Length = 877
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 327 QDHHRGPAPRHSEKHSASEA 268
+DHHR PR + SASEA
Sbjct: 714 EDHHRSKRPRTTTTSSASEA 733
>03_04_0163 + 17865529-17865801,17866030-17866102,17866251-17866270
Length = 121
Score = 26.6 bits (56), Expect = 6.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 163 QWKWCGLRRDQTGREG 210
+W W GLRR + GR G
Sbjct: 49 RWMWRGLRRTKAGRRG 64
>08_02_1499 -
27558872-27559015,27559544-27559666,27560214-27560312,
27561257-27561307
Length = 138
Score = 26.2 bits (55), Expect = 8.4
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -1
Query: 347 RAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSET 228
+AV + + T AR+ G A +P P +VCC + ET
Sbjct: 17 KAVKTNSISFTSARK-GNAFLRLQPVPMRFAVCCAAKKET 55
>06_03_1407 - 29954374-29954738,29955939-29958558
Length = 994
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 306 PGLCGGPDVPAHGSAPPGGG 365
PGLCGGP A + GGG
Sbjct: 614 PGLCGGPVADACPPSMAGGG 633
>06_03_0786 - 24579722-24580137,24580518-24580590
Length = 162
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 163 QWKWCGLRRDQTGREGL 213
+W W GLRR + GR G+
Sbjct: 144 RWMWRGLRRMKDGRRGM 160
>04_03_0771 + 19434460-19434987
Length = 175
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -3
Query: 354 AVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVS 187
A +RE+ HHRG A + +H+ + R LP P P ST V+
Sbjct: 76 ADSTREEAEHGHHRGRAGGEARRHTVV---LSRRSLPPESSPPPPPSPEPSTAAVA 128
>01_06_0691 - 31268729-31269010,31269596-31270051,31270560-31271735
Length = 637
Score = 26.2 bits (55), Expect = 8.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -1
Query: 311 ARRPGTARNTRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 171
AR P R+ P+ + + +R TP R KPS P RSP H
Sbjct: 242 ARSPPLRRDV--PELFKEAKSSSKRFSTPPPRRKPSSPPAPSRSPPH 286
>01_01_1081 + 8504035-8504461,8504546-8504685
Length = 188
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 369 GHPLRAVQSREQGHQDHHRGPAP 301
G + AV S EQGH+ +GP+P
Sbjct: 114 GEGVDAVPSLEQGHKGDGQGPSP 136
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,320,817
Number of Sequences: 37544
Number of extensions: 242920
Number of successful extensions: 983
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 600754600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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