Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_M06
         (657 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P46821 Cluster: Microtubule-associated protein 1B (MAP ...    36   1.1  
UniRef50_A2DPL6 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q6ZSV3 Cluster: CDNA FLJ45188 fis, clone BRAWH3048724; ...    33   4.6  
UniRef50_Q47QD3 Cluster: 2-deoxy-D-gluconate 3-dehydrogenase; n=...    33   6.0  
UniRef50_Q9UF83 Cluster: Putative uncharacterized protein DKFZp4...    33   6.0  
UniRef50_Q7S2J1 Cluster: Predicted protein; n=1; Neurospora cras...    33   8.0  

>UniRef50_P46821 Cluster: Microtubule-associated protein 1B (MAP 1B)
            [Contains: MAP1 light chain LC1]; n=42; Coelomata|Rep:
            Microtubule-associated protein 1B (MAP 1B) [Contains:
            MAP1 light chain LC1] - Homo sapiens (Human)
          Length = 2468

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 25/85 (29%), Positives = 43/85 (50%)
 Frame = +2

Query: 254  IKSELLPKGSKLNSLGRGGAGTREYHYEYKEETLPAGKYDRKDYRAVEEFTIPPKTAESS 433
            +  +L   G + +S G+   G   Y Y+  EET  +   +  DY + E+ T   +T++  
Sbjct: 1847 LNRDLSTPGLEKDSGGKT-PGDFSYAYQKPEETTRSPDEEDYDYESYEKTT---RTSDVG 1902

Query: 434  TYYYQKEERELPAPTCGTRTYNYES 508
             YYY+K ER   +P+     Y+YE+
Sbjct: 1903 GYYYEKIERTTKSPS--DSGYSYET 1925


>UniRef50_A2DPL6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 1229

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +2

Query: 326 YHYEYKEETLPAGKYDRKDYRAVEEFTIPPKTAESS-TYYYQKEERE 463
           Y+Y  +EET P  K ++++ + +E F    K+ ES  +YYY +EE++
Sbjct: 676 YYYSSEEETKPTNKQNKEEKQKIETF----KSNESEYSYYYSEEEKK 718



 Score = 32.7 bits (71), Expect = 8.0
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +2

Query: 326 YHYEYKEETLPAGKYDRKDYRAVEEFTIPPKTAESS-TYYYQKEERELP 469
           Y+Y  +EE  P     +K+   +E+  + P   ES  +YYY  EE   P
Sbjct: 412 YYYSSEEEQKPKSDEKQKNSPVIEQKPVQPVEKESEYSYYYSSEEEVKP 460


>UniRef50_Q6ZSV3 Cluster: CDNA FLJ45188 fis, clone BRAWH3048724;
           n=2; Homo sapiens|Rep: CDNA FLJ45188 fis, clone
           BRAWH3048724 - Homo sapiens (Human)
          Length = 174

 Score = 33.5 bits (73), Expect = 4.6
 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
 Frame = -2

Query: 410 GW*TPQQPYSP----SCHTFRQEVSPPCTRSDTPLYQPHRVQASSAYCLSEVART*SYPI 243
           GW  P  P  P    SC  +     PP  +    L +P RV +SSA C      T S P+
Sbjct: 32  GW--PPLPAEPVPLRSCQQWGCARPPPVLQGAGFLQRPSRVSSSSAPCTRSADLTESAPL 89

Query: 242 VLRCTGRCRLMRTPCILCV 186
           +      C  +  P + C+
Sbjct: 90  LQLALASCLPLSDPVVFCL 108


>UniRef50_Q47QD3 Cluster: 2-deoxy-D-gluconate 3-dehydrogenase; n=1;
           Thermobifida fusca YX|Rep: 2-deoxy-D-gluconate
           3-dehydrogenase - Thermobifida fusca (strain YX)
          Length = 249

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 30/71 (42%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
 Frame = -3

Query: 565 VFGRXRTXHXRIARCRAEAGLIVVGAC-STGRGREXXXXXXXXVSAAFGCLRRDGELLNS 389
           V G  R     IAR  AE G +VVGA  ST + RE        +S A   L RD E LNS
Sbjct: 12  VTGASRGIGAAIARGYAERGALVVGAARSTDQLRELEATNPERISTATVDL-RDAESLNS 70

Query: 388 PIVLPVILSGR 356
            + L V   GR
Sbjct: 71  LVDLVVERHGR 81


>UniRef50_Q9UF83 Cluster: Putative uncharacterized protein
           DKFZp434C196; n=4; Homo/Pan/Gorilla group|Rep: Putative
           uncharacterized protein DKFZp434C196 - Homo sapiens
           (Human)
          Length = 580

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
 Frame = +3

Query: 153 NLARWPPN----RTANTKNTRSSHQAAPSRTP 236
           +L RWPP     RT   ++ R SH+A+P+RTP
Sbjct: 184 SLTRWPPRASPTRTPPRESPRMSHRASPTRTP 215


>UniRef50_Q7S2J1 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 209

 Score = 32.7 bits (71), Expect = 8.0
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = +2

Query: 344 EETLPAGKYDRKDYRAVEEFTIPPKTAESSTYYYQKEERELPAPTCGTRTYNYES 508
           +E  P G +DR  YR+ E    P  T    T+  +K+  ++P        + Y S
Sbjct: 38  DEPKPTGPFDRNAYRSQEALVAPQNTLRGDTHPPKKQSFDMPRSNNSFIPHGYRS 92


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,030,511
Number of Sequences: 1657284
Number of extensions: 11474060
Number of successful extensions: 33297
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 32061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33269
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49586781480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)