Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_M06
         (657 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical pr...    29   2.2  
Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical pr...    29   2.2  
AF002196-8|AAB53976.2|  586|Caenorhabditis elegans Hypothetical ...    29   3.8  
U39849-5|AAA81048.2|  663|Caenorhabditis elegans Hypothetical pr...    28   5.1  
AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical ...    28   6.7  
Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical pr...    27   8.9  

>Z69360-4|CAC42291.2|  732|Caenorhabditis elegans Hypothetical
           protein F25H8.5c protein.
          Length = 732

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 380 PSCHTFRQEVSPPCTRSDTPLYQPHRVQASSAYCL 276
           P C  ++Q   PPC R   P  QP      +  CL
Sbjct: 109 PPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCL 143


>Z69360-3|CAA93286.2|  369|Caenorhabditis elegans Hypothetical
           protein F25H8.5b protein.
          Length = 369

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 380 PSCHTFRQEVSPPCTRSDTPLYQPHRVQASSAYCL 276
           P C  ++Q   PPC R   P  QP      +  CL
Sbjct: 109 PPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCL 143


>Z69360-2|CAA93285.2|  780|Caenorhabditis elegans Hypothetical
           protein F25H8.5a protein.
          Length = 780

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 12/35 (34%), Positives = 15/35 (42%)
 Frame = -2

Query: 380 PSCHTFRQEVSPPCTRSDTPLYQPHRVQASSAYCL 276
           P C  ++Q   PPC R   P  QP      +  CL
Sbjct: 109 PPCQQYQQPQPPPCQRPQPPQPQPQPYPQRTGGCL 143


>AF002196-8|AAB53976.2|  586|Caenorhabditis elegans Hypothetical
           protein C09D4.1a protein.
          Length = 586

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
 Frame = +2

Query: 20  SWTSXVKRNT-SSRLXXPNVCVIN*SAVQSVFVLCFVNTKGLSLR*SCKMATKSYSKHKE 196
           +WTS    +  SSR+    +     +  +     C V  +G S   SC  AT S   +++
Sbjct: 35  AWTSSESGSAHSSRVSSSPITPRKSAETEETLPTCLVRARGSSSAHSCSAATTSQQSNRQ 94

Query: 197 YKEFSSSG 220
            KE    G
Sbjct: 95  SKEHRIGG 102


>U39849-5|AAA81048.2|  663|Caenorhabditis elegans Hypothetical
           protein C06A8.1a protein.
          Length = 663

 Score = 28.3 bits (60), Expect = 5.1
 Identities = 23/97 (23%), Positives = 42/97 (43%)
 Frame = +2

Query: 170 TKSYSKHKEYKEFSSSGTVPYTGEQLDMIKSELLPKGSKLNSLGRGGAGTREYHYEYKEE 349
           TK    H   K+  S  T+PY G + D  ++ ++ +   L S    G      HYE   E
Sbjct: 7   TKVIESHGTIKKIDSLSTMPYCGVETD--ENAVVEEKITLES----GKSWSPKHYELLHE 60

Query: 350 TLPAGKYDRKDYRAVEEFTIPPKTAESSTYYYQKEER 460
            +     +++ + ++E F  PP+       + ++ ER
Sbjct: 61  RIERLIDEKQQFFSLEFF--PPRFVNGVPNFLERVER 95


>AC024790-3|AAF60637.1|  446|Caenorhabditis elegans Hypothetical
           protein Y47D7A.6 protein.
          Length = 446

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 24/91 (26%), Positives = 35/91 (38%), Gaps = 2/91 (2%)
 Frame = +2

Query: 311 AGTREYHYEYKEETLPAGKYDRKDYRAVEEFTIPPK--TAESSTYYYQKEERELPAPTCG 484
           A +++Y      ET P+  YD     +V  +T P K   A   + Y QK     P+P+  
Sbjct: 322 AASKKYPIAPTYETTPSS-YDTTPSYSVPSYTAPKKYPVASPPSDYAQKPSYSAPSPS-- 378

Query: 485 TRTYNYESSLXXXXXXXXXXXXXTTKDLTQN 577
             T N+E+               T  D T N
Sbjct: 379 GYTSNFEAPTETNYAPAPASYSATAMDYTSN 409


>Z27081-3|CAH19085.1|  869|Caenorhabditis elegans Hypothetical
           protein M01A8.2b protein.
          Length = 869

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
 Frame = -1

Query: 315 PAPPRPSEFSLLPFGSSSD-LIISNCS-PVYGTVPLDEN 205
           P PP PS FS   +   +D +I SNC+  V   +P+D++
Sbjct: 95  PPPPNPSNFSNGSWSDIADSMITSNCTFTVRKGLPIDDD 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,780,986
Number of Sequences: 27780
Number of extensions: 278147
Number of successful extensions: 784
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)