Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_M05
         (652 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L77701-1|AAA98114.1|   63|Homo sapiens COX17 protein.                  58   3e-08
BC108317-1|AAI08318.1|   63|Homo sapiens COX17 cytochrome c oxid...    58   3e-08
BC105280-1|AAI05281.1|   63|Homo sapiens COX17 cytochrome c oxid...    58   3e-08
BC010933-1|AAH10933.1|   63|Homo sapiens COX17 cytochrome c oxid...    58   3e-08
AL138686-3|CAH71087.1|   63|Homo sapiens protein ( Human DNA seq...    58   3e-08
AF269244-1|AAF82569.1|   63|Homo sapiens COX17 protein.                58   3e-08
AK124300-1|BAC85829.1|  153|Homo sapiens protein ( Homo sapiens ...    30   8.2  

>L77701-1|AAA98114.1|   63|Homo sapiens COX17 protein.
          Length = 63

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 163 QTKRARDACIIXNGEENCGPLIEXHKACMXKMGFNI 270
           +TK+ARDACII  GEE+CG LIE HK CM  +GF I
Sbjct: 28  ETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC108317-1|AAI08318.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 163 QTKRARDACIIXNGEENCGPLIEXHKACMXKMGFNI 270
           +TK+ARDACII  GEE+CG LIE HK CM  +GF I
Sbjct: 28  ETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC105280-1|AAI05281.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 163 QTKRARDACIIXNGEENCGPLIEXHKACMXKMGFNI 270
           +TK+ARDACII  GEE+CG LIE HK CM  +GF I
Sbjct: 28  ETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>BC010933-1|AAH10933.1|   63|Homo sapiens COX17 cytochrome c oxidase
           assembly homolog (S. cerevisiae) protein.
          Length = 63

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 163 QTKRARDACIIXNGEENCGPLIEXHKACMXKMGFNI 270
           +TK+ARDACII  GEE+CG LIE HK CM  +GF I
Sbjct: 28  ETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AL138686-3|CAH71087.1|   63|Homo sapiens protein ( Human DNA
           sequence from clone RP11-189B4 on chromosome
           13q14.11-14.3Contains a protein phosphatase 1 regulatory
           (inhibitor) subunit 2  ).
          Length = 63

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 163 QTKRARDACIIXNGEENCGPLIEXHKACMXKMGFNI 270
           +TK+ARDACII  GEE+CG LIE HK CM  +GF I
Sbjct: 28  ETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AF269244-1|AAF82569.1|   63|Homo sapiens COX17 protein.
          Length = 63

 Score = 58.0 bits (134), Expect = 3e-08
 Identities = 24/36 (66%), Positives = 28/36 (77%)
 Frame = +1

Query: 163 QTKRARDACIIXNGEENCGPLIEXHKACMXKMGFNI 270
           +TK+ARDACII  GEE+CG LIE HK CM  +GF I
Sbjct: 28  ETKKARDACIIEKGEEHCGHLIEAHKECMRALGFKI 63


>AK124300-1|BAC85829.1|  153|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42307 fis, clone TRACH2005066. ).
          Length = 153

 Score = 29.9 bits (64), Expect = 8.2
 Identities = 13/45 (28%), Positives = 22/45 (48%)
 Frame = -2

Query: 186 CIACSFCLQGKHRQGFSLGFSTFSGAGPSKTLTSTALALAFPIFQ 52
           C+ CSF  QG H Q   +G S+ +G   +    +  ++    +FQ
Sbjct: 70  CVTCSFSAQGVHVQVCHMGKSSVTGVWCADNFVAQVISTVPDVFQ 114


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,915,835
Number of Sequences: 237096
Number of extensions: 1215833
Number of successful extensions: 1632
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1632
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)