Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M04
(631 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 319 3e-86
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 305 4e-82
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 257 1e-67
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 215 6e-55
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 213 4e-54
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 193 3e-48
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 190 2e-47
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 4e-45
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 170 2e-41
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 167 3e-40
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 144 1e-33
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 119 5e-26
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 3e-21
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 97 2e-19
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 69 2e-18
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 88 2e-16
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 59 5e-14
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 74 2e-12
UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole gen... 66 9e-10
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 59 8e-08
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 48 1e-07
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 7e-07
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 54 4e-06
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 47 4e-04
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 47 4e-04
UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum... 36 0.009
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.46
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 1.9
UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1; ... 32 9.9
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 319 bits (784), Expect = 3e-86
Identities = 146/197 (74%), Positives = 161/197 (81%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 217 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 396
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY TG
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 397 XXXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 576
E+NVEPVD+GPGAF C+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+KRF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 577 PXYDAXSKKFNAEVHRA 627
P Y A +K FNA+VHRA
Sbjct: 181 PGYSAETKSFNADVHRA 197
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 305 bits (750), Expect = 4e-82
Identities = 139/196 (70%), Positives = 157/196 (80%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 217 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 396
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY TG
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 397 XXXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 576
EYNVE +D PGAF CYLD GLARTTTG +VFGA+KGAVDGGL++PHS KRF
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 577 PXYDAXSKKFNAEVHR 624
P YD+ SK+FNAEVHR
Sbjct: 181 PGYDSESKEFNAEVHR 196
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 257 bits (630), Expect = 1e-67
Identities = 121/196 (61%), Positives = 141/196 (71%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 217 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 396
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+TG
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 397 XXXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 576
+YNVE + F LD+GLARTTTG+++F MKG DGG+NVPHS RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 577 PXYDAXSKKFNAEVHR 624
+D SK++NAE HR
Sbjct: 180 FGFDQESKEYNAEAHR 195
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 215 bits (526), Expect = 6e-55
Identities = 104/204 (50%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
Frame = +1
Query: 31 LNMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
L M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NK
Sbjct: 22 LEMPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNK 81
Query: 211 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXX 390
D+ Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+TG
Sbjct: 82 DIIAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADK 141
Query: 391 XXXXXXXXXXEYNVEPVDNGPG------AFXCYLDVGLARTTTGARVFGAMKGAVDGGLN 552
V + G F LDVGLARTTTGARVFG +KGAVDGG+
Sbjct: 142 FQGAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMA 201
Query: 553 VPHSIKRFPXYDAXSKKFNAEVHR 624
VPH RFP Y+ +A+VHR
Sbjct: 202 VPHRPNRFPGYNKEKSSLDAKVHR 225
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 213 bits (519), Expect = 4e-54
Identities = 100/190 (52%), Positives = 122/190 (64%), Gaps = 2/190 (1%)
Frame = +1
Query: 52 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 225
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 226 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXX 405
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+TG
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 406 XXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXY 585
+Y+VE D F C+LD GL RT+TGARVF A+KGAVDGGL++PH+ KRF Y
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKRFAGY 192
Query: 586 DAXSKKFNAE 615
D K + +
Sbjct: 193 DLQDKSHDPD 202
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 193 bits (470), Expect = 3e-48
Identities = 95/199 (47%), Positives = 128/199 (64%), Gaps = 3/199 (1%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 217 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXX 396
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+TG
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYATGLLLARRTLKTLKMDKFYE 120
Query: 397 XXXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 576
+ N++ P F LD+GL R+T G RVF A+KGA DGG+++PH+ +RF
Sbjct: 121 GNKTI---DGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRF 175
Query: 577 PXYDAXS---KKFNAEVHR 624
P + + +K++A VH+
Sbjct: 176 PGFSVDNDKKEKYDANVHK 194
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 190 bits (463), Expect = 2e-47
Identities = 99/196 (50%), Positives = 117/196 (59%), Gaps = 3/196 (1%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 217 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG---XXXXXXXXXXXXXXX 387
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+TG
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 388 XXXXXXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSI 567
E + + +LDVG+ RTTTG RVF A+KGA DGGLN+PH
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN 180
Query: 568 KRFPXYDAXSKKFNAE 615
RFP +FN E
Sbjct: 181 NRFP---GSKNEFNPE 193
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 4e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 217 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 303
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 170 bits (414), Expect = 2e-41
Identities = 81/185 (43%), Positives = 109/185 (58%), Gaps = 5/185 (2%)
Frame = +1
Query: 88 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 267
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 268 AYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDN 447
A S+EL R+GV GL +YAAAY+TG +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 448 GPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXY-----DAXSKKFNA 612
F LD GL RTTTG RVFG +KGA DGG+N+PHS RFP Y + S K+
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFPGYVRASDEGESSKYKP 486
Query: 613 EVHRA 627
E H+A
Sbjct: 487 EDHKA 491
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 129
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 167 bits (405), Expect = 3e-40
Identities = 84/175 (48%), Positives = 106/175 (60%)
Frame = +1
Query: 49 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 228
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 229 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXX 408
+ + GD VC A S ELP+YG+K+GL+NY AAY+TG
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYATG---LLVARRFLTQMKLADVFKT 120
Query: 409 XXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 573
EY + + P F LDVGLARTTTGA+VF MKGAVDGGL +PH++ R
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIPHNVCR 173
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 144 bits (350), Expect = 1e-33
Identities = 74/172 (43%), Positives = 101/172 (58%), Gaps = 1/172 (0%)
Frame = +1
Query: 64 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 243
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 244 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXE 423
+GD ++ A S EL RYG+ G TNY+AAY+TG
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYATGFLIGRRALTAMSLDEVYRPKEIDGT-- 121
Query: 424 YNV-EPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRF 576
Y+V + +D A +LD+GLAR+T GARVFGA+KGA D GLNVPHS +F
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAKF 173
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 119 bits (287), Expect = 5e-26
Identities = 65/145 (44%), Positives = 79/145 (54%), Gaps = 3/145 (2%)
Frame = +1
Query: 199 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXX 378
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY TG
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 379 XXXXXXXXXXXXXXEYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 558
Y+VE +N F LDVG+ TTG RVFGA+KGA DGGL+VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 559 HSIKRFPXYDAXSKK---FNAEVHR 624
HS KRFP Y + ++A+ HR
Sbjct: 124 HSEKRFPGYSVDEENNGTYDAQAHR 148
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (248), Expect = 3e-21
Identities = 48/80 (60%), Positives = 57/80 (71%)
Frame = +1
Query: 13 HFVTXILNMGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLI 192
H I + FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +
Sbjct: 4 HARMNIYLLAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFV 63
Query: 193 VRLSNKDVTCQVAYSRIEGD 252
VR +NKD+T Q+ + I GD
Sbjct: 64 VRFTNKDITAQIISASIAGD 83
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 97.5 bits (232), Expect = 2e-19
Identities = 54/171 (31%), Positives = 85/171 (49%)
Frame = +1
Query: 61 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 240
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 241 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXX 420
++GD I+ ++Y L + K NY +Y G
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSYLLGYYFGKDLIEKVKQSET---------- 118
Query: 421 EYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKR 573
YN + N +D+GL R T G + F +MKG+VD G+N+PH+ +
Sbjct: 119 -YNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNK 165
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 69.3 bits (162), Expect(2) = 2e-18
Identities = 41/89 (46%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 258
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 259 VCAAYSHEL-PRYGVKVGLTNYAAAYSTG 342
+ AA+S EL ++G K N AAY TG
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAYLTG 87
Score = 46.0 bits (104), Expect(2) = 2e-18
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +1
Query: 454 GAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 579
G LDVGL + G+RVF A+KGA+D G+ +PHS + P
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILP 139
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 87.8 bits (208), Expect = 2e-16
Identities = 63/167 (37%), Positives = 83/167 (49%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 258
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 259 VCAAYSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEP 438
+ AAYS EL YG + + AAY TG + V+
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAYLTGML-------------------------FAVKA 93
Query: 439 VDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 579
++ G G LD+GLAR GARVF A+KGAVD GL+VP+ P
Sbjct: 94 LNAGYG--EAILDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 58.8 bits (136), Expect(2) = 5e-14
Identities = 34/88 (38%), Positives = 48/88 (54%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 258
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 259 VCAAYSHELPRYGVKVGLTNYAAAYSTG 342
+ +A+S +L YG + N +AY TG
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAYLTG 86
Score = 41.1 bits (92), Expect(2) = 5e-14
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +1
Query: 454 GAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 564
G LD+GL T G++VF +GA+D GL++PH+
Sbjct: 97 GVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHN 133
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 74.1 bits (174), Expect = 2e-12
Identities = 33/52 (63%), Positives = 41/52 (78%)
Frame = +1
Query: 187 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 342
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY G
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAYCIG 52
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +1
Query: 481 GLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVH 621
GLARTTTG +VFGA+K VD GL++PHS K FP YD+ SK+FNAEV+
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFPGYDSVSKEFNAEVY 117
>UniRef50_A7PBC0 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 128
Score = 65.7 bits (153), Expect = 9e-10
Identities = 31/70 (44%), Positives = 46/70 (65%)
Frame = +1
Query: 421 EYNVEPVDNGPGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSK 600
+Y+VE NG F +L+VGL +T+ G VFG +K A+DG LN+PH+ +RF +K
Sbjct: 43 DYSVEST-NGKRPFYAFLNVGLVKTSIGNCVFGVLKEALDGSLNIPHNDRRFVGSSKDNK 101
Query: 601 KFNAEVHRAS 630
+ +A+VHR S
Sbjct: 102 QLDAKVHRKS 111
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 59.3 bits (137), Expect = 8e-08
Identities = 34/88 (38%), Positives = 51/88 (57%)
Frame = +1
Query: 79 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 258
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 259 VCAAYSHELPRYGVKVGLTNYAAAYSTG 342
+A S EL +YG N AAY TG
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAYLTG 86
Score = 41.9 bits (94), Expect = 0.012
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +1
Query: 472 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFPXYDAXSKKFNAEVHRAS 630
LD+GL ++ G+RV+ A+KG VD G +P S FP + + AE S
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFPSDERIRGEHIAEYREES 155
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 47.6 bits (108), Expect(2) = 1e-07
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 210
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 211 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSTG 342
+++ + +S + GD IV A S +L ++G+ N +Y G
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSYFIG 102
Score = 31.1 bits (67), Expect(2) = 1e-07
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 460 FXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 564
F +D+G R R+ +KG +DGG+ +P S
Sbjct: 121 FLLTIDIGFKRLNEKGRINAFIKGLIDGGIQIPVS 155
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 7e-07
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +1
Query: 85 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 180
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 53.6 bits (123), Expect = 4e-06
Identities = 33/87 (37%), Positives = 47/87 (54%)
Frame = +1
Query: 82 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 261
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 262 CAAYSHELPRYGVKVGLTNYAAAYSTG 342
+A S L +G N +AAY TG
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAYLTG 86
Score = 37.1 bits (82), Expect = 0.35
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 472 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 579
LD+G+ + G +++ +KGA+D GL +PH+ P
Sbjct: 103 LDIGVQPSIKGTKIYAVLKGALDAGLYIPHNDSILP 138
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 46.8 bits (106), Expect = 4e-04
Identities = 20/36 (55%), Positives = 25/36 (69%)
Frame = +1
Query: 472 LDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 579
LDVGLA T+G RVF A++G VD GL++PH P
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
Score = 43.2 bits (97), Expect = 0.005
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 3/92 (3%)
Frame = +1
Query: 76 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 255
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 256 IVCAAYSHEL-PRYG--VKVGLTNYAAAYSTG 342
++ + L R+G + + A+Y TG
Sbjct: 58 VIISVTGKTLVDRFGWPLDASRKSVPASYLTG 89
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 46.8 bits (106), Expect = 4e-04
Identities = 49/163 (30%), Positives = 64/163 (39%), Gaps = 1/163 (0%)
Frame = +1
Query: 94 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 270
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 271 YSHELPRYGVKVGLTNYAAAYSTGXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVDNG 450
L +YGV + N Y G +E NG
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCYLVGYIA-------------------------GIESEKNG 92
Query: 451 PGAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 579
LD G + G R+ +KG D G+ VPH FP
Sbjct: 93 --VESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_A0RUE8 Cluster: Ribosomal protein L18; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L18 - Cenarchaeum
symbiosum
Length = 159
Score = 35.5 bits (78), Expect(2) = 0.009
Identities = 22/82 (26%), Positives = 43/82 (52%)
Frame = +1
Query: 97 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 276
+R RE KT+Y ++R ++ + + T V +SN++ Q+ +++GD ++ + +S
Sbjct: 8 RRLREEKTNY-KKRRSMLMGRRDFVT------VHISNENAQVQIHAPKMDGDVVIASGHS 60
Query: 277 HELPRYGVKVGLTNYAAAYSTG 342
L G K + A+Y TG
Sbjct: 61 RYLASKGWKGSRKSIPASYLTG 82
Score = 26.2 bits (55), Expect(2) = 0.009
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 454 GAFXCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSIKRFP 579
GA + G R T R+ A+KG D G++VP FP
Sbjct: 93 GAKSAIMYTGTRRYTD--RISAALKGVSDAGVDVPIDPSTFP 132
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.46
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 97 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 276
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 277 HELPR 291
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 1.9
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 37 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 216
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 217 TCQVA 231
C +A
Sbjct: 161 QCSLA 165
>UniRef50_Q0UX35 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 503
Score = 32.3 bits (70), Expect = 9.9
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = -1
Query: 337 LNMLQHNLSDQPSHHNVATHVNKQRTQYGHLQSESRPP 224
LN LQ +L D PSH T V + Q H Q + PP
Sbjct: 21 LNRLQPSLEDPPSHLQALTKVVMMQHQIPHQQQHALPP 58
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 601,269,785
Number of Sequences: 1657284
Number of extensions: 11540013
Number of successful extensions: 29944
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 28867
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29911
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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