Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_M04
(631 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.26
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.26
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.4
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 5.7
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 7.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 21 7.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 21 7.5
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.9
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.9
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.9
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 21 9.9
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 9.9
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.2 bits (55), Expect = 0.26
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 58 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKY 183
KN++ +++Y+ K R +T+ K + N YN Y
Sbjct: 273 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 314
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.2 bits (55), Expect = 0.26
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 58 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKY 183
KN++ +++Y+ K R +T+ K + N YN Y
Sbjct: 284 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 325
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.0 bits (47), Expect = 2.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAY 234
TD RK ++ +++ K ++ ++V + N+D +AY
Sbjct: 288 TDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDCGSAIAY 326
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/33 (33%), Positives = 14/33 (42%)
Frame = -1
Query: 355 VLIADQLNMLQHNLSDQPSHHNVATHVNKQRTQ 257
V+ + L +S HHNV H RTQ
Sbjct: 1661 VISDSESGRLDTEMSTWGYHHNVNKHCTIHRTQ 1693
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -2
Query: 564 GMRNIEATVNSTLHSSKD 511
GM NIE + +T +SSK+
Sbjct: 193 GMNNIETYIVNTNYSSKN 210
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/28 (32%), Positives = 12/28 (42%)
Frame = +3
Query: 516 WSYEGCC*RWPQCSSFHQKIPXL*CXIQ 599
WS W CSSF Q+ C ++
Sbjct: 407 WSVNAGMWMWLSCSSFFQQFFHCYCPVR 434
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 627 GPVYFSIELFGXCIIXRES 571
G + F I FG C RES
Sbjct: 59 GSIIFVISFFGCCGAIRES 77
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 564 GMRNIEATVNSTLHSSK 514
GM NIE + +T +SSK
Sbjct: 193 GMNNIETYIVNTNYSSK 209
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 258
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 217 SSHYSRERSCSRDRNREYRKKDRRYEKLHNE 247
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 21.0 bits (42), Expect = 9.9
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +1
Query: 118 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNK 210
+ +Y+R+R +D+N+ K R +L N+
Sbjct: 228 SSHYSRERSCSRDRNREYKEKDRRYEKLHNE 258
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 9.9
Identities = 8/25 (32%), Positives = 14/25 (56%)
Frame = +1
Query: 49 KVVKNKQYFKRYQVKFKRRREGKTD 123
K KN+ +++Y+ K R KT+
Sbjct: 286 KSYKNENSYRKYRETSKERSRDKTE 310
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,467
Number of Sequences: 438
Number of extensions: 3826
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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