Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L24
         (648 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A4VCL2 Cluster: IP18281p; n=10; Coelomata|Rep: IP18281p...    75   2e-12
UniRef50_UPI0000DB77CE Cluster: PREDICTED: similar to CG31145-PA...    62   9e-09
UniRef50_Q7SEG2 Cluster: Predicted protein; n=1; Neurospora cras...    37   0.48 
UniRef50_Q7R511 Cluster: GLP_137_54589_59211; n=1; Giardia lambl...    36   1.1  
UniRef50_A2R3U4 Cluster: Contig An14c0180, complete genome; n=3;...    36   1.1  
UniRef50_A5E467 Cluster: Putative uncharacterized protein; n=1; ...    35   1.5  
UniRef50_Q4S877 Cluster: Chromosome 3 SCAF14707, whole genome sh...    35   2.0  
UniRef50_Q4RS04 Cluster: Chromosome 7 SCAF15001, whole genome sh...    33   7.9  

>UniRef50_A4VCL2 Cluster: IP18281p; n=10; Coelomata|Rep: IP18281p -
           Drosophila melanogaster (Fruit fly)
          Length = 980

 Score = 74.5 bits (175), Expect = 2e-12
 Identities = 34/61 (55%), Positives = 44/61 (72%)
 Frame = +1

Query: 463 NPTIGEMEDLXLSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKEGG 642
           NPT+ EM     S NASNLE+FQL+I + ELY + + LV+A+L+DM  LP+ H  QKEGG
Sbjct: 611 NPTLAEMLHRKASANASNLERFQLRITKKELYGEQDTLVDAVLRDMIKLPIQHVVQKEGG 670

Query: 643 T 645
           T
Sbjct: 671 T 671



 Score = 38.7 bits (86), Expect = 0.12
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
 Frame = +3

Query: 168 HGRVRIGDVXDKGRSA---YIEFRKRFLQKSNSSNGSREYEQSAQAETSGLAT 317
           H ++R+G+  D G        EF+++FLQKSN+S GS+E    A A  SG AT
Sbjct: 500 HQKIRLGNDYDGGTGGGGMLHEFKRKFLQKSNAS-GSKEASTQAGASQSGGAT 551


>UniRef50_UPI0000DB77CE Cluster: PREDICTED: similar to CG31145-PA,
           isoform A; n=3; Endopterygota|Rep: PREDICTED: similar to
           CG31145-PA, isoform A - Apis mellifera
          Length = 955

 Score = 62.5 bits (145), Expect = 9e-09
 Identities = 27/61 (44%), Positives = 43/61 (70%)
 Frame = +1

Query: 463 NPTIGEMEDLXLSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKEGG 642
           NPT+GE++ +    N+S LE+F L+I++ ELY +    V+ +L ++AT P++H  QKEGG
Sbjct: 586 NPTLGELKKIGPKKNSSTLERFHLQISRIELYPERSKYVDQLLHEIATRPIVHVVQKEGG 645

Query: 643 T 645
           T
Sbjct: 646 T 646



 Score = 41.5 bits (93), Expect = 0.017
 Identities = 20/49 (40%), Positives = 30/49 (61%)
 Frame = +3

Query: 162 PXHGRVRIGDVXDKGRSAYIEFRKRFLQKSNSSNGSREYEQSAQAETSG 308
           P HGRVR+GD  +   + Y  FR++FLQ+ N+S      + SA  ++SG
Sbjct: 481 PSHGRVRVGDDPNTD-TIYNNFRRKFLQRLNASREQTSGDTSATTQSSG 528



 Score = 33.1 bits (72), Expect = 6.0
 Identities = 13/18 (72%), Positives = 16/18 (88%)
 Frame = +1

Query: 100 FTLMLVVDLQMDYGISGH 153
           FT++LV+DLQMD G SGH
Sbjct: 460 FTILLVMDLQMDLGYSGH 477


>UniRef50_Q7SEG2 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 671

 Score = 36.7 bits (81), Expect = 0.48
 Identities = 20/77 (25%), Positives = 35/77 (45%)
 Frame = +1

Query: 202 KADQPT*NFGRDSCRKATAAMVPENTNSQPRQRRVVLQPTWNRGRLRHRPISLTTYNKSC 381
           + D    NF   SC  +T+A+ P  +     +  V+  P  N   L   P  L +++ +C
Sbjct: 276 RGDDSFNNFPPSSCSSSTSALRPRLSTGLDGKAEVITSPPQNPASLP--PSELQSFDSAC 333

Query: 382 SLSYRGSAFDNAVVIPP 432
             SY+    ++ V +PP
Sbjct: 334 RPSYQRGPSESPVTLPP 350


>UniRef50_Q7R511 Cluster: GLP_137_54589_59211; n=1; Giardia lamblia
            ATCC 50803|Rep: GLP_137_54589_59211 - Giardia lamblia
            ATCC 50803
          Length = 1540

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 30/97 (30%), Positives = 45/97 (46%)
 Frame = +1

Query: 289  PRQRRVVLQPTWNRGRLRHRPISLTTYNKSCSLSYRGSAFDNAVVIPPHRDLNVLRPXNP 468
            P     ++    NRG L    ISLT+ +KS       S FD+  V P    +  +R   P
Sbjct: 866  PESFNPLVDAALNRGCLNKNMISLTSDSKS---GVPSSLFDS--VAPKTIAIKPVRGQQP 920

Query: 469  TIGEMEDLXLSVNASNLEKFQLKIAQHELYEDGEILV 579
             +G+M D  L V ASN  +   + +Q    +DG+I +
Sbjct: 921  -VGDMVDSGLDVTASNSSQPSTQTSQALYSKDGQISI 956


>UniRef50_A2R3U4 Cluster: Contig An14c0180, complete genome; n=3;
           Aspergillus|Rep: Contig An14c0180, complete genome -
           Aspergillus niger
          Length = 533

 Score = 35.5 bits (78), Expect = 1.1
 Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
 Frame = -1

Query: 399 PPV---AERTGFVVSRQTYRPVAQASSVPRRLQDHSSLPGLT 283
           PPV    E+ G ++ R+ +R  +Q + VP +L+DH  LPG +
Sbjct: 350 PPVFRGLEKLGLILPRRFFRNASQYTKVPSQLRDHEVLPGFS 391


>UniRef50_A5E467 Cluster: Putative uncharacterized protein; n=1;
            Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
            uncharacterized protein - Lodderomyces elongisporus
            (Yeast) (Saccharomyces elongisporus)
          Length = 1413

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 26/90 (28%), Positives = 41/90 (45%)
 Frame = +3

Query: 78   NQRLPDTLHFNACRRSANGLWNFRTQGYPXHGRVRIGDVXDKGRSAYIEFRKRFLQKSNS 257
            N+R   +L FN    S +   +  T G+  H   R+ +   KG+   ++     +QKS+ 
Sbjct: 850  NKRRRSSL-FNPAHSSTSNKSSISTDGHVAHAHSRLNE-EQKGQDLPVQ-----VQKSSG 902

Query: 258  SNGSREYEQSAQAETSGLATDVEPRTPAPP 347
               + E E +  A T+  AT   P  PAPP
Sbjct: 903  LAPAAEPEPATTATTATTATAAPPPPPAPP 932


>UniRef50_Q4S877 Cluster: Chromosome 3 SCAF14707, whole genome
           shotgun sequence; n=3; Tetraodontidae|Rep: Chromosome 3
           SCAF14707, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 681

 Score = 34.7 bits (76), Expect = 2.0
 Identities = 16/44 (36%), Positives = 25/44 (56%)
 Frame = +1

Query: 514 NLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKEGGT 645
           N  +F + I ++ELY     ++EA+LKD+ T  +     K GGT
Sbjct: 206 NWLRFHIGINRYELYSRRSPVMEALLKDLVTQRITSVAMKSGGT 249


>UniRef50_Q4RS04 Cluster: Chromosome 7 SCAF15001, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 7 SCAF15001, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 320

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 29/122 (23%), Positives = 42/122 (34%)
 Frame = +3

Query: 120 RSANGLWNFRTQGYPXHGRVRIGDVXDKGRSAYIEFRKRFLQKSNSSNGSREYEQSAQAE 299
           RS   L   RT G+     VR      + RS  ++ +   LQK    +G  ++ +    E
Sbjct: 153 RSGRPLGRRRTLGHVSETEVRREVELSRKRSIKLKAQVDQLQKKQEGHGWSQHRERVTEE 212

Query: 300 TSGLATDVEPRTPAPPADKFDDLQQILFAQLQGVRLR*CSGHTSAPRPECFEARXSDYWG 479
              +   + P T A P            AQLQ V  +    HT+        A       
Sbjct: 213 VLSVLRLLSPLTEAEPHPPEPSELDAALAQLQNVARKLAMSHTTQEESHGGRAAEEQNGA 272

Query: 480 DG 485
           DG
Sbjct: 273 DG 274


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 593,464,415
Number of Sequences: 1657284
Number of extensions: 11216336
Number of successful extensions: 33976
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33963
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48955894634
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)