Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L24
(648 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0330 + 2566662-2566740,2566821-2566911,2567003-2567057,256... 32 0.45
03_05_0220 + 22063411-22063468,22063535-22063545,22064478-220646... 31 0.79
11_08_0083 + 28256844-28258760 31 1.0
10_04_0022 + 7687383-7687670,7688479-7688556,7689456-7689535,768... 29 2.4
03_05_0751 - 27389910-27392105 29 2.4
11_08_0082 + 28239159-28241237 29 4.2
04_04_1571 + 34504087-34504421,34505002-34505731,34506091-345120... 29 4.2
05_01_0078 - 523366-525196,525622-525675,527135-529341 28 5.6
04_04_0974 + 29831274-29833184 28 5.6
08_02_0242 - 14701116-14702666 28 7.4
12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-25... 27 9.7
11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-23... 27 9.7
08_02_0744 - 20659326-20659580,20659748-20660005,20660103-206615... 27 9.7
>03_01_0330 +
2566662-2566740,2566821-2566911,2567003-2567057,
2567166-2567297,2567517-2567567,2567769-2567840,
2568590-2568680,2568988-2569066,2569147-2569210,
2569917-2570020,2570182-2570287,2572080-2572157,
2572649-2572801,2573039-2573128,2573284-2573349,
2573485-2573583,2573660-2573734,2574455-2574514,
2574909-2574998,2575202-2575323,2575462-2575591,
2575662-2575741,2576167-2576302,2577005-2577086,
2578475-2578620,2578796-2578876,2578994-2579094,
2579770-2580008,2580100-2580209,2580518-2580646,
2580728-2580802,2581455-2581586,2582298-2582470,
2582566-2582688,2582771-2582831,2582910-2583005,
2583251-2583351,2584014-2584119,2584673-2584786,
2584888-2584962,2585619-2585711,2585883-2585954,
2586253-2586338,2586434-2586527,2586596-2586703,
2586782-2587021
Length = 1579
Score = 31.9 bits (69), Expect = 0.45
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = -3
Query: 412 YRRRTPCS*ANRICCKSSNLSAGGAGVLGS 323
++RR C+ N + K NL +GG GVLGS
Sbjct: 866 HQRRRGCAAVNEVLVKFRNLCSGGFGVLGS 895
>03_05_0220 +
22063411-22063468,22063535-22063545,22064478-22064609,
22064696-22065799,22065874-22066566,22066968-22067019,
22067861-22067916,22067917-22068063
Length = 750
Score = 31.1 bits (67), Expect = 0.79
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 411 IEGGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHS 301
IE GPP TG + +RP A+++++ RL D++
Sbjct: 459 IEDGPPKLRITGIELPESGFRPYARSNNIGLRLADYA 495
>11_08_0083 + 28256844-28258760
Length = 638
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = -1
Query: 408 EGGPPVAERTGFVVSRQTYRPVAQASSVPRRL 313
EGGPP TG V + +RP Q RRL
Sbjct: 389 EGGPPEVRMTGIDVPQPGFRPADQIEETGRRL 420
>10_04_0022 +
7687383-7687670,7688479-7688556,7689456-7689535,
7689876-7690095,7690444-7690677
Length = 299
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = -1
Query: 405 GGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHSSLPGLTVR 277
GGPPV R +RQ + + + RRLQ + P T R
Sbjct: 49 GGPPVTARGPQATARQPLATMRGSQAAARRLQATAQRPSATAR 91
>03_05_0751 - 27389910-27392105
Length = 731
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = -1
Query: 408 EGGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHSSLPGLTVRILG 268
EGGPP TG V + +RP + +RL +++ G+ G
Sbjct: 488 EGGPPKLRITGIDVPQPGFRPTERIEETGQRLAEYAEKIGVPFEYQG 534
>11_08_0082 + 28239159-28241237
Length = 692
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -1
Query: 408 EGGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHSSLPGLTVR 277
EGGPP TG + +RP Q RRL + + G+ R
Sbjct: 435 EGGPPEVRITGIDFPQPGFRPADQIEETGRRLSNCARQFGVPFR 478
>04_04_1571 +
34504087-34504421,34505002-34505731,34506091-34512077,
34512493-34513964,34514114-34514377,34514761-34514978,
34515759-34516030,34516190-34516559,34516578-34516797,
34516819-34518931,34518941-34519193,34519269-34519401,
34520597-34521114,34521207-34522115,34522195-34522368,
34522833-34522882,34523963-34524035,34524413-34524477,
34524736-34525522,34525622-34525878,34525989-34526109,
34526315-34526956
Length = 5320
Score = 28.7 bits (61), Expect = 4.2
Identities = 18/32 (56%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 553 LYEDG-EILVEAILKDMATLPVLHAEQKEGGT 645
LYE+ ILVE I K + T PV H+E K GGT
Sbjct: 447 LYEEPWSILVEQICKFIYTSPVFHSEIK-GGT 477
>05_01_0078 - 523366-525196,525622-525675,527135-529341
Length = 1363
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 408 EGGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHSSL 295
EGGPP TG V + +RP + +RL +++++
Sbjct: 1122 EGGPPKLRITGVDVPQPGFRPHERIEETGKRLAEYANM 1159
>04_04_0974 + 29831274-29833184
Length = 636
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 405 GGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHSSL 295
GGPP TG + + +RP + RRL D++ +
Sbjct: 394 GGPPSVRITGVDLPQPGFRPAQLIEATGRRLHDYARM 430
>08_02_0242 - 14701116-14702666
Length = 516
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = -1
Query: 303 SSLP-GLTVRILGNHCCCCFSA 241
+SLP T+R+L CCCC+S+
Sbjct: 144 ASLPCAATLRVLHLACCCCYSS 165
>12_01_0029 + 248725-248769,248870-249074,250040-250128,250237-250315,
250429-250556,250764-250862,250953-251061,251301-251380,
251464-251691,251768-251833,251970-252086,252538-252735,
252847-252963,253056-253115,253228-253314,253419-253502,
253623-253757,253837-253899,253979-254083,254174-254286,
254374-254626,254715-254851,254970-255248,255352-256354,
256450-256935,257023-257193,257285-257470,257820-257942,
258024-258134,258225-258395
Length = 1708
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 472 IGEMEDLXLSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKE 636
+ ++E+ L N +NL+ ++ ELYE +I + A + + A L V + K+
Sbjct: 1197 LSDIEEFILMPNVANLQNVGDRLYDEELYEAAKI-IYAFISNWAKLAVTLVKLKQ 1250
>11_01_0030 + 233285-233329,233439-233643,234637-234725,234834-234912,
235048-235175,235383-235481,235572-235680,235920-235999,
236083-236310,236387-236452,236589-236705,237142-237339,
237451-237567,237660-237719,237832-237918,238023-238106,
238233-238367,238446-238508,238588-238692,238781-238893,
238981-239233,239322-239458,239577-239855,239958-240960,
241054-241539,241627-241797,241890-242075,242426-242548,
242630-242740,242834-243004
Length = 1708
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/55 (27%), Positives = 29/55 (52%)
Frame = +1
Query: 472 IGEMEDLXLSVNASNLEKFQLKIAQHELYEDGEILVEAILKDMATLPVLHAEQKE 636
+ ++E+ L N +NL+ ++ ELYE +I + A + + A L V + K+
Sbjct: 1197 LSDIEEFILMPNVANLQNVGDRLYDEELYEAAKI-IYAFISNWAKLAVTLVKLKQ 1250
>08_02_0744 -
20659326-20659580,20659748-20660005,20660103-20661575,
20661677-20661835,20661948-20662074,20662155-20662486,
20662574-20663383,20663772-20664110,20664187-20664340,
20664427-20665143,20665699-20665967
Length = 1630
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/70 (28%), Positives = 29/70 (41%)
Frame = -1
Query: 438 SVRRYDHCIIEGGPPVAERTGFVVSRQTYRPVAQASSVPRRLQDHSSLPGLTVRILGNHC 259
+V+++ I PP A G V+RQT P + A+ R + P L R G
Sbjct: 11 AVQKFRSLIAGPTPPAAAAEGEEVARQTSGPPSPATPTRSRSGAADTTPPLPARPGGGRR 70
Query: 258 CCCFSARISS 229
+ISS
Sbjct: 71 AIALRRQISS 80
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,812,232
Number of Sequences: 37544
Number of extensions: 331373
Number of successful extensions: 1009
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1008
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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