Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L22
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_1147 + 31261435-31261763,31261915-31262736,31262934-312629...    30   1.8  
05_04_0175 - 18742156-18743592                                         29   4.2  
09_01_0120 + 1839097-1839277,1840315-1840443,1841694-1841833,184...    28   7.4  
09_01_0115 - 1761037-1761082,1761276-1761355,1761437-1761616,176...    28   7.4  

>04_04_1147 +
           31261435-31261763,31261915-31262736,31262934-31262970,
           31262987-31263028,31263092-31263179,31264344-31264486
          Length = 486

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 264 KCPALHINPALC*VRPCYGTG 326
           KCP +H+ P    ++ CYGTG
Sbjct: 111 KCPQVHVGPVGHQIQDCYGTG 131


>05_04_0175 - 18742156-18743592
          Length = 478

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 15/44 (34%), Positives = 25/44 (56%)
 Frame = -1

Query: 551 VSRACCMREDIDSAXTGHASSSFIALELLMSAFDITNDESRSAS 420
           V+R   + ED+    TGH+  S +A   ++SA+DI    + SA+
Sbjct: 322 VTRYAALGEDVSVTVTGHSLGSALA---MISAYDIAESGAASAA 362


>09_01_0120 +
           1839097-1839277,1840315-1840443,1841694-1841833,
           1842291-1842419,1845311-1845463,1845803-1845904,
           1846797-1846976,1847070-1847149,1847413-1847442,
           1847958-1848057
          Length = 407

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = -1

Query: 395 VGEMATDAARLGNNCSVCWIRLAASTVARPNST*CRIDV*RW 270
           +G    D+A L  N S+CW+RL     A  ++  CR+    W
Sbjct: 282 LGPSPDDSATLLANRSLCWLRLENGKQALADANMCRMFRPHW 323


>09_01_0115 -
           1761037-1761082,1761276-1761355,1761437-1761616,
           1761819-1761920,1763097-1763249,1764005-1764133,
           1764911-1765050,1766003-1766077,1768741-1768914,
           1769016-1769085
          Length = 382

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -1

Query: 383 ATDAARLGNNCSVCWIRLAASTVARPNST*CRI 285
           A D A L  N S+CW+RL+    A  ++  CR+
Sbjct: 289 AHDKATLLANRSLCWLRLSTGNGALADANMCRM 321


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,971,183
Number of Sequences: 37544
Number of extensions: 273587
Number of successful extensions: 505
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)