Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L22
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical pr...    31   0.54 
Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z36948-1|CAA85409.1|  180|Caenorhabditis elegans Hypothetical
           protein D2089.2 protein.
          Length = 180

 Score = 31.5 bits (68), Expect = 0.54
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 314 LRYWLLTLSNTHCNCCQDELHLLPSHL 394
           L  W+ T SN  C  CQD   L+P+ L
Sbjct: 56  LEQWVRTTSNIQCTICQDMFELIPAGL 82


>Z67882-3|CAA91800.2| 1324|Caenorhabditis elegans Hypothetical protein
            F22E10.2 protein.
          Length = 1324

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 6/57 (10%)
 Frame = +3

Query: 132  SVQILALLRRTIDLNYEN----KKRANSLKWI--AVNGILFAIFIYDLSCKCPALHI 284
            ++Q+L   RR ++ +YEN    +KR    K +  AVN  +   F+Y +SC C AL I
Sbjct: 956  TIQLLTRTRRFLN-SYENESKKRKRTELRKSVYEAVNYCISQNFMYYMSCFCFALAI 1011


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,018,492
Number of Sequences: 27780
Number of extensions: 248047
Number of successful extensions: 485
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 485
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)