Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L18
         (574 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          25   0.70 
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      25   0.70 
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    25   0.70 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 455 YLMEGSYNKIFLAKGNVPAESYTFFMD 535
           YL+  +Y   +L K NVP +   +F +
Sbjct: 198 YLLAANYTGWYLTKHNVPEQRLNYFTE 224


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 455 YLMEGSYNKIFLAKGNVPAESYTFFMD 535
           YL+  +Y   +L K NVP +   +F +
Sbjct: 198 YLLAANYTGWYLTKHNVPEQRLNYFTE 224


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 24.6 bits (51), Expect = 0.70
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 141 GRNVNCVRASFILFKSAPHLSSLLG 67
           G+ V+C  +  ILF S+P L+ L G
Sbjct: 378 GQMVHCPESDSILFVSSPFLNGLEG 402


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = -3

Query: 506 AHYPLLRIFCCSCPPLNTVXEQAG 435
           AH+ L   F  SC P+    EQ G
Sbjct: 67  AHHRLYPAFSSSCDPVPGNLEQIG 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,157
Number of Sequences: 438
Number of extensions: 3139
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)