Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L17
(635 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 220 2e-58
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 220 2e-58
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 153 2e-38
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 88 9e-19
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 76 4e-15
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 76 5e-15
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 73 5e-14
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 41 1e-04
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 34 0.015
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 34 0.015
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 34 0.020
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 30 0.32
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 28 0.98
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 28 1.3
SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1 |Schi... 28 1.3
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 28 1.3
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 2.3
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 5.2
SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.9
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 6.9
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 6.9
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 6.9
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 25 9.1
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 25 9.1
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 220 bits (537), Expect = 2e-58
Identities = 112/193 (58%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Frame = +3
Query: 60 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 239
MV FT +E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 240 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDXREKSE-KGFLINLIDSPGHVDFSSEV 416
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 417 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXY 596
TAALRVTDGAL QTETVLRQA+ ERI+P++ +NK+DR Y
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELY 175
Query: 597 XTFQRIVQNVNVI 635
F R+V++VNV+
Sbjct: 176 QNFARVVESVNVV 188
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 220 bits (537), Expect = 2e-58
Identities = 112/193 (58%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Frame = +3
Query: 60 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 239
MV FT +E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 240 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDXREKSE-KGFLINLIDSPGHVDFSSEV 416
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 417 TAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXY 596
TAALRVTDGAL QTETVLRQA+ ERI+P++ +NK+DR Y
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDRALLELQISQEELY 175
Query: 597 XTFQRIVQNVNVI 635
F R+V++VNV+
Sbjct: 176 QNFARVVESVNVV 188
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 153 bits (371), Expect = 2e-38
Identities = 83/186 (44%), Positives = 115/186 (61%)
Frame = +3
Query: 78 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 257
+++ + + NIRN +++AHVDHGK+TL DSL++ GII+ AG RF D R+DE R
Sbjct: 7 EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITR 66
Query: 258 CITIKSTAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 437
IT+KS+AIS+FF+ + + + ++ EK +LINLIDSPGHVDFSSEV++A R+
Sbjct: 67 GITMKSSAISLFFK--------VISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLC 118
Query: 438 DGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTFQRIV 617
DGA QT TVLRQA +RIK IL +NKMDR + R+V
Sbjct: 119 DGAFVLVDAVEGVCSQTITVLRQAWIDRIKVILVINKMDRLITELKLSPIEAHYHLLRLV 178
Query: 618 QNVNVI 635
+ VN +
Sbjct: 179 EQVNAV 184
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 88.2 bits (209), Expect = 9e-19
Identities = 61/171 (35%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Frame = +3
Query: 66 NFTVDEIRGMMDKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA--GETRF-- 227
N + E DKKR IRN+ + AH+D GK+T T+ ++ G I G+
Sbjct: 41 NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGA 100
Query: 228 -TDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDF 404
D + E+++ ITI+S A +E + N + EK + IN+ID+PGH+DF
Sbjct: 101 KMDFMELEREKGITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDF 158
Query: 405 SSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 557
+ EV ALRV DGA+ QT TV RQ + I F+NKMDR
Sbjct: 159 TIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 76.2 bits (179), Expect = 4e-15
Identities = 53/151 (35%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Frame = +3
Query: 111 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT--DTRKDEQDRCITIKSTAI 284
+IRN+ +IAH+D GK+TLT+ ++ G + +T T D E+ R ITI S AI
Sbjct: 27 SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86
Query: 285 SMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXX 464
S + + INLID+PGH DF+ EV ++ V DGA+
Sbjct: 87 SFTWRNQR--------------------INLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 465 XXXXXXQTETVLRQAIAERIKPILFMNKMDR 557
QT+ V +QA I ++F+NKMDR
Sbjct: 127 SAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 75.8 bits (178), Expect = 5e-15
Identities = 49/157 (31%), Positives = 79/157 (50%)
Frame = +3
Query: 84 IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCI 263
+RG+ + +RN +VIAH+DHGKSTL+D ++ G+I +F D + E+ R I
Sbjct: 50 VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGI 106
Query: 264 TIKSTAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDG 443
T+K+ SM + + +L+NLID+PGHVDF +EV +L +G
Sbjct: 107 TVKAQTCSMIYYYH----------------GQSYLLNLIDTPGHVDFRAEVMHSLAACEG 150
Query: 444 ALXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMD 554
+ QT + A ++ + I +NK+D
Sbjct: 151 CILLVDASQGIQAQTLSNFYMAFSQNLVIIPVLNKVD 187
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 72.5 bits (170), Expect = 5e-14
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 1/181 (0%)
Frame = +3
Query: 90 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCIT 266
G++ ++R+ V H+ HGKS L D LV + R+TDT E++R ++
Sbjct: 132 GLLTGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMS 191
Query: 267 IKSTAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGA 446
IKST +++ + K F ID+PGHVDF EV A + ++DG
Sbjct: 192 IKSTPLTLAVS---------------DMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGV 236
Query: 447 LXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDRXXXXXXXXXXXXYXTFQRIVQNV 626
+ T +++ AI + +L +NK+DR Y + ++ V
Sbjct: 237 VLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDRLILELRLPPNDAYHKLRHVIDEV 296
Query: 627 N 629
N
Sbjct: 297 N 297
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 41.1 bits (92), Expect = 1e-04
Identities = 39/152 (25%), Positives = 61/152 (40%), Gaps = 1/152 (0%)
Frame = +3
Query: 102 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTA 281
KK ++ N+ I HVDHGK+TLT ++ + A + D +E+ R ITI S
Sbjct: 50 KKPHV-NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAH 108
Query: 282 ISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXX 461
+ +E + +D PGH D+ + DGA+
Sbjct: 109 VE--YETANRHYAH------------------VDCPGHADYIKNMITGAATMDGAIIVVS 148
Query: 462 XXXXXXXQTETVLRQAIAERIKPI-LFMNKMD 554
QT L A +K I +++NK+D
Sbjct: 149 ATDGQMPQTREHLLLARQVGVKQIVVYINKVD 180
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 34.3 bits (75), Expect = 0.015
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +3
Query: 96 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII--AGARAGETRFTDTRKDEQDRCITI 269
M K++ N+ VI HVD GKST T L+ K G I E T+ K +
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKG------SF 54
Query: 270 KSTAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 449
K + + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 55 KYAWVLDKLKAERERGITIDIALWKFETPK-YNVTVIDAPGHRDFIKNMITGTSQADCAI 113
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 34.3 bits (75), Expect = 0.015
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +3
Query: 96 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII--AGARAGETRFTDTRKDEQDRCITI 269
M K++ N+ VI HVD GKST T L+ K G I E T+ K +
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKG------SF 54
Query: 270 KSTAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 449
K + + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 55 KYAWVLDKLKAERERGITIDIALWKFETPK-YNVTVIDAPGHRDFIKNMITGTSQADCAI 113
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.020
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 96 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 191
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.9 bits (64), Expect = 0.32
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +3
Query: 123 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR----FTDTRKDEQDRCITIKSTAISM 290
++++ HVDHGK+TL D+ K+ I + G T+ FT D+ + IT T M
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQKIGAFT-VPFDKGSKFITFLDTPGHM 231
Query: 291 FFELEEK 311
FE K
Sbjct: 232 AFEAMRK 238
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 28.3 bits (60), Expect = 0.98
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 1/111 (0%)
Frame = +3
Query: 120 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 299
N+ I HVD GKSTL +++ G++ R E + E + S A+ E
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV-DKRTMEK--IEREAKEAGKESWYLSWALDSTSE 296
Query: 300 LEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDF-SSEVTAALRVTDGAL 449
EK E + F +L+D+PGH + ++ + A + G L
Sbjct: 297 EREKGKTVEVGRAYFETEHRRF--SLLDAPGHKGYVTNMINGASQADIGVL 345
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.9 bits (59), Expect = 1.3
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -2
Query: 496 TVSVCTHTPD-TQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 320
T + C+ P+ T ST + +V+ S + ++ ST P ++ + S S V +
Sbjct: 575 TTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLS-----SSSVHS 629
Query: 319 TKSFSSSSKNIEMAV 275
+ + SSSS++ M++
Sbjct: 630 SSAHSSSSRSSSMSL 644
>SPBC30B4.01c |wsc1|SPBC3D6.14c|transmembrane receptor Wsc1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 374
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Frame = -2
Query: 499 STVSVCTHTPDTQSTT-TRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 323
+T S + +P + STT T +PS + S++ +S S+ S S S S
Sbjct: 135 TTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 194
Query: 322 NTKSFSSSSKNIEMAV 275
++ S SSSS + + +
Sbjct: 195 SSSSSSSSSSSSSVPI 210
Score = 27.1 bits (57), Expect = 2.3
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -2
Query: 502 RSTVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVM 323
++TVS + + T S+++ +PS + + TS S+ S S S S
Sbjct: 124 QTTVSSSSVSSTTSSSSSSSPSSSSTTTTTSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 183
Query: 322 NTKSFSSSSKN 290
++ S SSSS +
Sbjct: 184 SSSSSSSSSSS 194
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.9 bits (59), Expect = 1.3
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +1
Query: 457 LTVCLVCVYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLKLXNYTXR---SSVLYKML 627
L V + YKL+ RL +A S+ C WT LF SN+ N S+ L+ +L
Sbjct: 348 LNVIGIAAYKLEDPVHRLFVTAFSVCCECLAWTSLF--SNISPENLAIERKISTFLFGLL 405
Query: 628 TS 633
S
Sbjct: 406 AS 407
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.1 bits (57), Expect = 2.3
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -2
Query: 409 EEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFSS-SSKNIEMAVDLMVMQRSCSSLRV 233
EE + P + K KK S F+ T +S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -2
Query: 361 PFSLFSRWSGFVMNTK-SFSSSSKNIEMAVDLMVMQR 254
P S +S W+ V+NTK SFS ++M +L+ Q+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELIDGQK 203
>SPCC1322.10 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 25.4 bits (53), Expect = 6.9
Identities = 19/70 (27%), Positives = 33/70 (47%)
Frame = -2
Query: 499 STVSVCTHTPDTQSTTTRAPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 320
S+ S T TP + STT+ + S + S ++S S+ + + S S S +
Sbjct: 140 SSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSS-SASSSGSISSAD 198
Query: 319 TKSFSSSSKN 290
K+ S+SS +
Sbjct: 199 AKTVSASSNS 208
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 116 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQL 21
D P + +H D ++E H RW + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -3
Query: 111 SASCPSSHGSRLP*NSPF*MVYDFCSIK 28
+ASCP SH L + PF + + C IK
Sbjct: 417 TASCPLSHSKLLLEHRPFQTLAEACIIK 444
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 6.9
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +1
Query: 145 ITASQPSRTRWFPR-PVSLLVREPERPVSLTRVRTNK 252
+T S T + P P S + REP P+S R+R+++
Sbjct: 48 LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 25.0 bits (52), Expect = 9.1
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 120 NMSVIAHVDHGKSTLTDSL 176
N+ I HV HGKST+ ++
Sbjct: 25 NIGTIGHVAHGKSTVVKAI 43
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 25.0 bits (52), Expect = 9.1
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +3
Query: 39 KNHKPSKMVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGII 197
K P+ +V+ V EI + K + ++ V HVD GKST+ ++ + G I
Sbjct: 155 KKQNPTDLVS--VPEIFEQSNPKPVV-HLVVTGHVDSGKSTMLGRIMFELGEI 204
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,483,545
Number of Sequences: 5004
Number of extensions: 48298
Number of successful extensions: 179
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 175
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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