Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L17
(635 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 36 4e-04
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 35 6e-04
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.016
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.47
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.1
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.1
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 4.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.7
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 5.7
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 5.7
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 21 7.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 35.5 bits (78), Expect = 4e-04
Identities = 34/118 (28%), Positives = 55/118 (46%)
Frame = +3
Query: 96 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 275
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 276 TAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 449
+ + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 35.1 bits (77), Expect = 6e-04
Identities = 34/118 (28%), Positives = 55/118 (46%)
Frame = +3
Query: 96 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKS 275
M K++ N+ VI HVD GKST T L+ K G I R E +F + E + + K
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKY 56
Query: 276 TAISMFFELEEKDLVFITNPDXREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 449
+ + E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 57 AWVLDKLKAERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.016
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +3
Query: 354 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 533
E G + +D+PGH F S +TD + QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 534 LFMNKMDR 557
+ +NK+D+
Sbjct: 250 VAINKIDK 257
Score = 29.5 bits (63), Expect = 0.029
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 123 MSVIAHVDHGKSTLTDSL 176
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.47
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 120 NMSVIAHVDHGKSTLTDSL 176
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 363 FLINLIDSPGHVDFSSEVTAALRVTDGAL 449
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 363 FLINLIDSPGHVDFSSEVTAALRVTDGAL 449
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 4.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -1
Query: 101 VHHPTDLVYREIHH 60
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 4.3
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -1
Query: 503 TQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREINVSR*VNQV 372
T C S Y +RH N + + CS RE R +Q+
Sbjct: 227 TSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQL 270
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 635 NDVNILYNTLERXV*XFSFKLELK 564
N++ YNTLER V S LE+K
Sbjct: 60 NELLSSYNTLERPVANESEPLEVK 83
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 5.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 635 NDVNILYNTLERXV*XFSFKLELK 564
N++ YNTLER V S LE+K
Sbjct: 60 NELLSSYNTLERPVANESEPLEVK 83
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 5.7
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 466 TQSTTTRAP-SVTRSAAVTSEEKSTC 392
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 21.4 bits (43), Expect = 7.6
Identities = 6/13 (46%), Positives = 10/13 (76%)
Frame = +3
Query: 258 CITIKSTAISMFF 296
C T+K +A+ M+F
Sbjct: 688 CATVKGSAVDMYF 700
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,378
Number of Sequences: 438
Number of extensions: 3583
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19071468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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