Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L15
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014296-2013|AAS65037.1| 518|Drosophila melanogaster CG7319-PC... 164 8e-41
AY069635-1|AAL39780.1| 330|Drosophila melanogaster LD40326p pro... 101 6e-22
AE014296-2014|AAF50022.2| 330|Drosophila melanogaster CG7319-PA... 101 6e-22
AE014298-1092|AAF46300.3| 763|Drosophila melanogaster CG1530-PA... 29 4.1
U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription ... 29 5.5
AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p pro... 29 5.5
AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA... 29 5.5
AY071408-1|AAL49030.1| 579|Drosophila melanogaster RE49422p pro... 29 7.2
AF373862-1|AAM21341.1| 579|Drosophila melanogaster Drm corazoni... 29 7.2
AE014296-2129|AAF49928.2| 579|Drosophila melanogaster CG10698-P... 29 7.2
AY061429-1|AAL28977.1| 306|Drosophila melanogaster LD35950p pro... 28 9.6
AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-... 28 9.6
AE014297-4308|AAF56847.1| 306|Drosophila melanogaster CG11837-P... 28 9.6
>AE014296-2013|AAS65037.1| 518|Drosophila melanogaster CG7319-PC,
isoform C protein.
Length = 518
Score = 164 bits (399), Expect = 8e-41
Identities = 84/176 (47%), Positives = 120/176 (68%), Gaps = 1/176 (0%)
Frame = +1
Query: 124 MGDSAYKPKISGTQQDPVLKQAEIAYMKLIEERNRERVQKLQVISKRNRLTGFTIGAGVL 303
M S PKI + P L +A++ +MKLIEE+N +RVQKL+ I + N LT +G VL
Sbjct: 105 MSASEQGPKIKYGESAPKLDKAQLQFMKLIEEQNLDRVQKLKRIRRNNLLTAGALGVSVL 164
Query: 304 GVYLYSIFAIKQETFLARFRRAPENTAVIMAVAKTALQIRLPPLPSIXDVIKLYKLRALR 483
+Y YSIF+++QE FL F + V ++ + RLPP+P+I +++KLY+L+A +
Sbjct: 165 AIYGYSIFSVQQEKFLDDFEEPKKMAQPSARVLQSGM--RLPPMPTIRELVKLYRLQARK 222
Query: 484 ELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGGITRSIIRQAPXKLVLIEK 648
+LSQNFLM+ RL DKIV+++G I V EVGPGPGGITRSI+R+ P +L+L+EK
Sbjct: 223 QLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGGITRSILRRHPQRLLLVEK 278
>AY069635-1|AAL39780.1| 330|Drosophila melanogaster LD40326p
protein.
Length = 330
Score = 101 bits (243), Expect = 6e-22
Identities = 46/78 (58%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +1
Query: 418 IRLPPLPSIXDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGG 594
+RLPP+P+I +++KLY+L+A ++LSQNFLM+ RL DKIV+++G I V EVGPGPGG
Sbjct: 13 MRLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGG 72
Query: 595 ITRSIIRQAPXKLVLIEK 648
ITRSI+R+ P +L+L+EK
Sbjct: 73 ITRSILRRHPQRLLLVEK 90
>AE014296-2014|AAF50022.2| 330|Drosophila melanogaster CG7319-PA,
isoform A protein.
Length = 330
Score = 101 bits (243), Expect = 6e-22
Identities = 46/78 (58%), Positives = 65/78 (83%), Gaps = 1/78 (1%)
Frame = +1
Query: 418 IRLPPLPSIXDVIKLYKLRALRELSQNFLMEPRLIDKIVRASGNIQ-NHTVCEVGPGPGG 594
+RLPP+P+I +++KLY+L+A ++LSQNFLM+ RL DKIV+++G I V EVGPGPGG
Sbjct: 13 MRLPPMPTIRELVKLYRLQARKQLSQNFLMDERLTDKIVKSAGRIDPRDLVLEVGPGPGG 72
Query: 595 ITRSIIRQAPXKLVLIEK 648
ITRSI+R+ P +L+L+EK
Sbjct: 73 ITRSILRRHPQRLLLVEK 90
>AE014298-1092|AAF46300.3| 763|Drosophila melanogaster CG1530-PA
protein.
Length = 763
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = -2
Query: 619 PALL*TELFHPGRVQLHKRYDFEYYLRHALF 527
P LL + HP RVQ+H R+ F Y ++ LF
Sbjct: 713 PYLLPLLMIHPLRVQIHIRFYFFCYFQYNLF 743
>U06460-1|AAC46481.1| 704|Drosophila melanogaster transcription
initiation factorTFIID 85 kDa subunit protein.
Length = 704
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 430 PLPSIXDVIKLYKLRALRELSQNFLM 507
PLP + D KL KL+ALRE S+ +
Sbjct: 335 PLPELKDSDKLLKLKALREASKRLAL 360
>AY051960-1|AAK93384.1| 704|Drosophila melanogaster LD42828p
protein.
Length = 704
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 430 PLPSIXDVIKLYKLRALRELSQNFLM 507
PLP + D KL KL+ALRE S+ +
Sbjct: 335 PLPELKDSDKLLKLKALREASKRLAL 360
>AE013599-1190|AAF58737.1| 704|Drosophila melanogaster CG7704-PA
protein.
Length = 704
Score = 29.1 bits (62), Expect = 5.5
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 430 PLPSIXDVIKLYKLRALRELSQNFLM 507
PLP + D KL KL+ALRE S+ +
Sbjct: 335 PLPELKDSDKLLKLKALREASKRLAL 360
>AY071408-1|AAL49030.1| 579|Drosophila melanogaster RE49422p
protein.
Length = 579
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 168 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQST 272
+SS G N+ Y +NR + RT S +T+ + T
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSMLTAVTQVDGT 458
>AF373862-1|AAM21341.1| 579|Drosophila melanogaster Drm corazonin
receptor protein.
Length = 579
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 168 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQST 272
+SS G N+ Y +NR + RT S +T+ + T
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSMLTAVTQVDGT 458
>AE014296-2129|AAF49928.2| 579|Drosophila melanogaster CG10698-PA
protein.
Length = 579
Score = 28.7 bits (61), Expect = 7.2
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 168 RSSAQAGRNSLYEINRREKSRTRSKITSDFETQST 272
+SS G N+ Y +NR + RT S +T+ + T
Sbjct: 424 KSSGGGGNNNAYSLNRGDSQRTPSMLTAVTQVDGT 458
>AY061429-1|AAL28977.1| 306|Drosophila melanogaster LD35950p
protein.
Length = 306
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 481 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 621
++ Q+ L P +I ++ + V E+GPG G +T ++ +A
Sbjct: 25 KDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERA 71
>AE014298-2322|AAN09382.3| 16223|Drosophila melanogaster CG32580-PA
protein.
Length = 16223
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 330 HQTGDVPCTISTSPRKYSS 386
HQT +VP T+STSP + SS
Sbjct: 3678 HQTTEVPWTLSTSPSQSSS 3696
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 330 HQTGDVPCTISTSPRKYSS 386
HQT +VP T+STSP + SS
Sbjct: 3872 HQTTEVPWTLSTSPSQSSS 3890
>AE014297-4308|AAF56847.1| 306|Drosophila melanogaster CG11837-PA
protein.
Length = 306
Score = 28.3 bits (60), Expect = 9.6
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +1
Query: 481 RELSQNFLMEPRLIDKIVRASGNIQNHTVCEVGPGPGGITRSIIRQA 621
++ Q+ L P +I ++ + V E+GPG G +T ++ +A
Sbjct: 25 KDFGQHILKNPLVITTMLEKAALRATDVVLEIGPGTGNMTVRMLERA 71
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,323,250
Number of Sequences: 53049
Number of extensions: 538450
Number of successful extensions: 1316
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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