Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L13
(480 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205; Euka... 179 3e-44
UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14; Mag... 162 4e-39
UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a pro... 161 6e-39
UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a pro... 161 7e-39
UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155... 152 3e-36
UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal ... 147 1e-34
UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1; Enceph... 105 5e-22
UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5; Magn... 105 7e-22
UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24; Archae... 102 4e-21
UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12; Archae... 99 6e-20
UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14; Euryar... 97 2e-19
UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum l... 89 6e-17
UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4; Euryarc... 87 2e-16
UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3; Thermop... 87 2e-16
UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3; Euryarc... 87 3e-16
UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1; Nanoarc... 68 1e-10
UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcu... 60 4e-09
UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal ... 52 7e-06
UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa... 42 0.005
UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;... 40 0.038
UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7; Mollicut... 37 0.27
UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021; ... 36 0.47
UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15; Bacteri... 35 0.82
UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1; ... 33 2.5
UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1... 33 2.5
UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26; Epsilon... 33 2.5
UniRef50_A0G972 Cluster: Putative uncharacterized protein precur... 33 4.4
>UniRef50_P62244 Cluster: 40S ribosomal protein S15a; n=205;
Eukaryota|Rep: 40S ribosomal protein S15a - Homo sapiens
(Human)
Length = 130
Score = 179 bits (436), Expect = 3e-44
Identities = 82/98 (83%), Positives = 89/98 (90%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
VIV+FLTVMMKHGYIGEFEI+DDHRAGKIVVNLTGRLNKCGVISPRFDV + D+E+W N
Sbjct: 33 VIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLNKCGVISPRFDVQLKDLEKWQNN 92
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LLPSRQFG++VLTTS GIMDHE A KH GGKILGFFF
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFFF 130
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 63 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 149
MVRMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRP 29
>UniRef50_Q9LX88 Cluster: 40S ribosomal protein S15a-4; n=14;
Magnoliophyta|Rep: 40S ribosomal protein S15a-4 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 130
Score = 162 bits (393), Expect = 4e-39
Identities = 74/98 (75%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 336
VI+KFL VM KHGYIGEFE VDDHR+GKIVV L GRLNKCGVISPRFDV + +IE WT
Sbjct: 33 VIIKFLIVMQKHGYIGEFEYVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIEGWTAR 92
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LLPSRQFG++VLTTS GIMDHE A K++GGK+LGFF+
Sbjct: 93 LLPSRQFGFIVLTTSAGIMDHEEARRKNVGGKVLGFFY 130
Score = 50.4 bits (115), Expect = 2e-05
Identities = 22/29 (75%), Positives = 28/29 (96%)
Frame = +3
Query: 63 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 149
MVR++VL+D LKS++NAEKRGKRQV+IRP
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRP 29
>UniRef50_UPI0001552BC3 Cluster: PREDICTED: similar to Rps15a
protein; n=3; Mus musculus|Rep: PREDICTED: similar to
Rps15a protein - Mus musculus
Length = 239
Score = 161 bits (392), Expect = 6e-39
Identities = 73/96 (76%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = +1
Query: 163 IVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNL 339
IV+FLTVMMKHGYI EFEI+DDHRAGK+VVNLTGRLNKCGVISPRFDV + D+E+W NL
Sbjct: 132 IVRFLTVMMKHGYISEFEIIDDHRAGKMVVNLTGRLNKCGVISPRFDVQLKDLEKWQNNL 191
Query: 340 LPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFF 447
LP+RQFG++VLTT GIMD E KH GG+ILGFF
Sbjct: 192 LPARQFGFIVLTTLAGIMDREEGRQKHTGGEILGFF 227
Score = 39.9 bits (89), Expect = 0.029
Identities = 20/30 (66%), Positives = 23/30 (76%)
Frame = +3
Query: 57 LAMVRMNVLSDALKSIHNAEKRGKRQVLIR 146
+ MV MNVL DALKS ++AEK GKRQ IR
Sbjct: 97 VTMVEMNVLVDALKSTNSAEKGGKRQFPIR 126
>UniRef50_UPI0000608089 Cluster: PREDICTED: similar to Rps15a
protein; n=5; Amniota|Rep: PREDICTED: similar to Rps15a
protein - Mus musculus
Length = 253
Score = 161 bits (391), Expect = 7e-39
Identities = 75/98 (76%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
VIV FLTVMMKHGY GEFEI+DDHR GKIVVNLTGRLNKCGVIS RFDV + D+++W N
Sbjct: 156 VIVWFLTVMMKHGYTGEFEIIDDHRDGKIVVNLTGRLNKCGVISLRFDVQLKDLDKWQNN 215
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LLP RQFG++VLTT GI+DHE A KH GGKILGFFF
Sbjct: 216 LLPLRQFGFIVLTTLAGIIDHEEARRKHTGGKILGFFF 253
Score = 57.2 bits (132), Expect = 2e-07
Identities = 27/29 (93%), Positives = 29/29 (100%)
Frame = +3
Query: 63 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 149
MVRMNVL+DALKSI+NAEKRGKRQVLIRP
Sbjct: 124 MVRMNVLADALKSINNAEKRGKRQVLIRP 152
>UniRef50_A6NIS3 Cluster: Uncharacterized protein ENSP00000348155;
n=33; Eukaryota|Rep: Uncharacterized protein
ENSP00000348155 - Homo sapiens (Human)
Length = 129
Score = 152 bits (369), Expect = 3e-36
Identities = 72/98 (73%), Positives = 81/98 (82%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
VI++FLTVM KHGYIGEFEI DDHRAGK+VV LT RLNKCGVISPRF V + D+E+W N
Sbjct: 33 VIIRFLTVM-KHGYIGEFEITDDHRAGKMVVYLTDRLNKCGVISPRFHVQLKDLEKWQNN 91
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LLPS QFG+++LTTS GI D E A KH GGKILGFFF
Sbjct: 92 LLPSYQFGFIILTTSAGITDREEARRKHTGGKILGFFF 129
Score = 50.4 bits (115), Expect = 2e-05
Identities = 23/29 (79%), Positives = 27/29 (93%)
Frame = +3
Query: 63 MVRMNVLSDALKSIHNAEKRGKRQVLIRP 149
MVR NVL+DALK I+NA+KRGKRQVL+RP
Sbjct: 1 MVRTNVLADALKRINNAKKRGKRQVLLRP 29
>UniRef50_UPI0000D9C93A Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Macaca mulatta|Rep: PREDICTED:
similar to ribosomal protein S15a - Macaca mulatta
Length = 345
Score = 147 bits (357), Expect = 1e-34
Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 1/92 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
VIV+FL+VMMKHGYIGEFEI+DDH AGKIVVNLTGRLNKCGVI+ RFDV D+E+W N
Sbjct: 199 VIVRFLSVMMKHGYIGEFEIIDDHTAGKIVVNLTGRLNKCGVINTRFDVQPKDLEKWRNN 258
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGK 432
L PS QFG++VLTTS GIMDHE A KH G +
Sbjct: 259 LFPSCQFGFIVLTTSAGIMDHEEARQKHTGSR 290
Score = 42.3 bits (95), Expect = 0.005
Identities = 20/21 (95%), Positives = 21/21 (100%)
Frame = +3
Query: 84 SDALKSIHNAEKRGKRQVLIR 146
SDALKSI+NAEKRGKRQVLIR
Sbjct: 174 SDALKSINNAEKRGKRQVLIR 194
>UniRef50_Q8SQL9 Cluster: 40S RIBOSOMAL PROTEIN S15A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S15A
- Encephalitozoon cuniculi
Length = 128
Score = 105 bits (252), Expect = 5e-22
Identities = 46/94 (48%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
Frame = +1
Query: 172 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPS 348
FL M++HGYI F + D R+GK +++L GRLN+CG ISP + V + IE + T LLP+
Sbjct: 35 FLLQMLRHGYISGFSYIHDKRSGKSIIDLNGRLNRCGAISPNYIVKRDGIEDFRTRLLPA 94
Query: 349 RQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
RQFG+++ TS GI+DH+ +++GGKILG+F+
Sbjct: 95 RQFGHVLFNTSKGILDHKECLTENVGGKILGYFY 128
>UniRef50_Q9M0E0 Cluster: 40S ribosomal protein S15a-5; n=5;
Magnoliophyta|Rep: 40S ribosomal protein S15a-5 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 129
Score = 105 bits (251), Expect = 7e-22
Identities = 46/98 (46%), Positives = 70/98 (71%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWT-N 336
V+ FL +M + GYI F++ D HR G+I V+L GR+N C ++ R DV +IE++T
Sbjct: 32 VMSSFLRIMKEKGYIKNFQVYDPHRVGRITVDLQGRVNDCKALTYRQDVRAKEIEKYTER 91
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LP+RQ+GY+V+TT GI+DHE A +++GG++LGFF+
Sbjct: 92 TLPTRQWGYVVITTPDGILDHEEAIKRNVGGQVLGFFY 129
Score = 32.3 bits (70), Expect = 5.8
Identities = 13/24 (54%), Positives = 20/24 (83%)
Frame = +3
Query: 78 VLSDALKSIHNAEKRGKRQVLIRP 149
+L+DAL++I NAE+RGK V ++P
Sbjct: 5 ILNDALRTIVNAERRGKASVELKP 28
>UniRef50_Q8U014 Cluster: 30S ribosomal protein S8P; n=24;
Archaea|Rep: 30S ribosomal protein S8P - Pyrococcus
furiosus
Length = 130
Score = 102 bits (245), Expect = 4e-21
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
+I + L VM K+GYIGEFE +DD RAG V L GR+NK G I PRF V +++ E+W
Sbjct: 33 LIGEVLRVMQKYGYIGEFEFIDDGRAGVYRVQLLGRINKAGAIKPRFPVKVSEFEKWEKR 92
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LP+ +FG L+++TS G+M H+ A K +GG+++ + +
Sbjct: 93 FLPAFEFGILIVSTSQGVMSHKEAIEKGIGGRLIAYVY 130
>UniRef50_O05636 Cluster: 30S ribosomal protein S8P; n=12;
Archaea|Rep: 30S ribosomal protein S8P - Sulfolobus
acidocaldarius
Length = 133
Score = 98.7 bits (235), Expect = 6e-20
Identities = 45/101 (44%), Positives = 65/101 (64%), Gaps = 4/101 (3%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTN- 336
+I+ L VM K GYIGEFE +DD RAGKI+V L GR+NKCG ISPR+ + N + R +
Sbjct: 33 LIISVLRVMQKEGYIGEFEYIDDGRAGKIIVQLLGRINKCGPISPRYPLDYNGLLRLPDY 92
Query: 337 ---LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LPS++ G ++++T G+M H + +GG LG+ +
Sbjct: 93 IRKYLPSKEIGIIIISTPKGVMSHRDGIREKIGGVTLGYVY 133
>UniRef50_Q8PV35 Cluster: 30S ribosomal protein S8P; n=14;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Methanosarcina mazei (Methanosarcina frisia)
Length = 130
Score = 97.1 bits (231), Expect = 2e-19
Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Frame = +1
Query: 175 LTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLLPSR 351
L VM GYIG+FE +DD +AG V L GR+NKCG I PR+ V ERW LP++
Sbjct: 38 LKVMQDLGYIGDFEFIDDGKAGIYSVTLVGRINKCGAIKPRYSVGTGSFERWEKQFLPAK 97
Query: 352 QFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
FG L+LTTS G+M A K +GG++L + +
Sbjct: 98 NFGALILTTSSGVMSQYEARDKKIGGQLLAYVY 130
>UniRef50_A7D102 Cluster: Ribosomal protein S8; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S8 -
Halorubrum lacusprofundi ATCC 49239
Length = 147
Score = 88.6 bits (210), Expect = 6e-17
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
+I L V+ GY+ FE VDD +AGK V L G +N+CG + PR+ ++ E+W
Sbjct: 50 IIGSVLEVLYDRGYVDGFEYVDDGKAGKFEVELKGAINECGAVKPRYSAGADEFEKWEKR 109
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LP+R +G L++TTS G+M H A + +GG+++ + +
Sbjct: 110 YLPARDYGTLIVTTSHGVMSHYEAREEGIGGQVIAYVY 147
>UniRef50_Q6L1B2 Cluster: 30S ribosomal protein S8P; n=4;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Picrophilus torridus
Length = 129
Score = 87.0 bits (206), Expect = 2e-16
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
+I + L VM + YI FE++++ R GK V L+ +N CGVI PR V ++IER+ +
Sbjct: 32 MIGRILKVMQDYNYIKSFEVIEEERGGKFRVELSDTINNCGVIKPRLSVKNSNIERYESR 91
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LP++ FG ++LTT+ GIM H A +GGK+L + +
Sbjct: 92 YLPAQDFGIIILTTTKGIMSHIEARKLGIGGKLLAYVY 129
>UniRef50_A0RVY8 Cluster: 30S ribosomal protein S8P; n=3;
Thermoprotei|Rep: 30S ribosomal protein S8P -
Cenarchaeum symbiosum
Length = 130
Score = 87.0 bits (206), Expect = 2e-16
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Frame = +1
Query: 166 VKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TNLL 342
V+ L + K GYIGEFE V+D R GK V+L ++ KCG ISPRF V + W L
Sbjct: 35 VEVLGTLKKAGYIGEFEHVEDSRGGKFSVHLLAKITKCGAISPRFKVKKGEYTFWEQQYL 94
Query: 343 PSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
PS G LV+TT+ G+M H A + +GG ++G+ +
Sbjct: 95 PSYDRGMLVVTTNQGVMSHHEAAERGIGGFLIGYVY 130
>UniRef50_O28369 Cluster: 30S ribosomal protein S8P; n=3;
Euryarchaeota|Rep: 30S ribosomal protein S8P -
Archaeoglobus fulgidus
Length = 129
Score = 86.6 bits (205), Expect = 3e-16
Identities = 39/98 (39%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
+I L VM +GYI FE V++HR GK +V L+G +N CG I PRF + + E +
Sbjct: 32 LIGNVLKVMKDYGYIKGFEYVENHRGGKFIVELSGNINDCGAIRPRFSSSVTEYEMYEKR 91
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LP+R FG L+++T+ G+M + A + LGG +L + +
Sbjct: 92 YLPARDFGILIVSTTKGVMSQKDARKQRLGGVLLAYVY 129
>UniRef50_Q74NG1 Cluster: 30S ribosomal protein S8P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S8P -
Nanoarchaeum equitans
Length = 129
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/98 (30%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIERW-TN 336
+I+K + +M + GYI + +VD R I + L+ N+ I PRF V +++E++
Sbjct: 32 LIIKLVEIMKREGYIKNYRLVDSSRGKIIEIELSEYFNEANAIKPRFPVEYSELEKYEKR 91
Query: 337 LLPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
LP+ FG L+L+TS G++ + A + +GG ++ + +
Sbjct: 92 YLPALNFGRLILSTSKGLITNREAKEQKIGGVLIAYVY 129
>UniRef50_Q01GJ6 Cluster: Ribosomal protein S15; n=1; Ostreococcus
tauri|Rep: Ribosomal protein S15 - Ostreococcus tauri
Length = 144
Score = 60.1 bits (139), Expect(2) = 4e-09
Identities = 25/31 (80%), Positives = 27/31 (87%)
Frame = +1
Query: 196 GYIGEFEIVDDHRAGKIVVNLTGRLNKCGVI 288
GYI EFE +DDHRAGKIVV L GR+NKCGVI
Sbjct: 107 GYINEFEFIDDHRAGKIVVELNGRINKCGVI 137
Score = 35.5 bits (78), Expect = 0.62
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +3
Query: 57 LAMVRMNVLSDALKSIHNAEKRGKRQVLIRP 149
++ V + + +S++NAEKRGKRQVL+RP
Sbjct: 31 VSSVALTSIFHRAESMYNAEKRGKRQVLVRP 61
Score = 22.6 bits (46), Expect(2) = 4e-09
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = +1
Query: 160 VIVKFLTVMMKH 195
V++KFL VM KH
Sbjct: 65 VVIKFLQVMQKH 76
>UniRef50_UPI0000DA3D5D Cluster: PREDICTED: similar to ribosomal
protein S15a; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S15a - Rattus norvegicus
Length = 60
Score = 52.0 bits (119), Expect = 7e-06
Identities = 27/52 (51%), Positives = 35/52 (67%)
Frame = +1
Query: 172 FLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDIER 327
F+TV MK G+FEIVD+ G+I V+L G LNK GVI FDV + D+E+
Sbjct: 3 FVTVKMK---TGKFEIVDNEGVGRITVSLMGSLNKYGVIGLGFDVQLGDLEK 51
>UniRef50_Q0JQL2 Cluster: Os01g0153200 protein; n=4; Oryza sativa|Rep:
Os01g0153200 protein - Oryza sativa subsp. japonica
(Rice)
Length = 1139
Score = 42.3 bits (95), Expect = 0.005
Identities = 18/34 (52%), Positives = 25/34 (73%)
Frame = +1
Query: 220 VDDHRAGKIVVNLTGRLNKCGVISPRFDVPINDI 321
VDDH++G+I++ GRLNK GVIS R DV + +
Sbjct: 912 VDDHKSGEIILEFDGRLNKWGVISFRSDVKVKKL 945
>UniRef50_UPI0000E1E986 Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 116
Score = 39.5 bits (88), Expect = 0.038
Identities = 15/25 (60%), Positives = 22/25 (88%)
Frame = +1
Query: 202 IGEFEIVDDHRAGKIVVNLTGRLNK 276
IG+FE++DDHRAGKIV NL+ ++ +
Sbjct: 9 IGKFEVIDDHRAGKIVENLSDKVTQ 33
>UniRef50_Q50304 Cluster: 30S ribosomal protein S8; n=7;
Mollicutes|Rep: 30S ribosomal protein S8 - Mycoplasma
pneumoniae
Length = 142
Score = 36.7 bits (81), Expect = 0.27
Identities = 24/99 (24%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Frame = +1
Query: 166 VKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCGVIS----PRFDVPINDIERWT 333
+ L +++K GY+ F+++++ K +V + + + S + P I R
Sbjct: 42 IAILEILVKEGYLANFQVLENKSKTKRIVTFNLKYTQRRIPSINGVKQISKPGLRIYRPF 101
Query: 334 NLLPS--RQFGYLVLTTSGGIMDHEXAXXKHLGGKILGF 444
LP G +++TS G+M + A K +GG+IL +
Sbjct: 102 EKLPLVLNGLGIAIISTSDGVMTDKVARLKKIGGEILAY 140
>UniRef50_UPI000049945C Cluster: hypothetical protein 90.t00021;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 90.t00021 - Entamoeba histolytica HM-1:IMSS
Length = 627
Score = 35.9 bits (79), Expect = 0.47
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 229 HRAGKIVVNLTGRLNKCGVISPRFDVPINDIERWTNLLPSRQFGYLVLTTS 381
H G I ++L RLN+ GV+ + + +I + LL FGYL +T+S
Sbjct: 192 HEIGNIHISLLNRLNQIGVVIGIYSNMLEEIPEYVTLL--HHFGYLTITSS 240
>UniRef50_Q8A490 Cluster: 30S ribosomal protein S8; n=15;
Bacteria|Rep: 30S ribosomal protein S8 - Bacteroides
thetaiotaomicron
Length = 131
Score = 35.1 bits (77), Expect = 0.82
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Frame = +1
Query: 181 VMMKHGYIGEFEIVDDHRAGKIVVNLT-GRLNKCGVISPRFDVPINDIERWTNL--LPS- 348
++ + GYI ++ V+D G I V L +NK I V + ++T +P
Sbjct: 37 ILFEKGYILNYKFVEDGPQGTIKVALKYDSVNKVNAIKKLERVSSPGMRKYTGYKDMPRV 96
Query: 349 -RQFGYLVLTTSGGIMDHEXAXXKHLGGKILGFFF 450
G +++TS G+M ++ A +GG++L + +
Sbjct: 97 INGLGIAIISTSKGVMTNKEAAELKIGGEVLCYVY 131
>UniRef50_Q6D8U4 Cluster: Putative uncharacterized protein; n=1;
Pectobacterium atrosepticum|Rep: Putative
uncharacterized protein - Erwinia carotovora subsp.
atroseptica (Pectobacterium atrosepticum)
Length = 860
Score = 33.5 bits (73), Expect = 2.5
Identities = 20/51 (39%), Positives = 25/51 (49%)
Frame = -1
Query: 174 KLNDDFGXRA**GLVFSLAFQHYV*ILRRHSIRSYAPWLRFSSRFVANRID 22
+ N ++ A G + SLA Y H SY W RFSS FV+N ID
Sbjct: 335 RFNMEWEHNASWGKMTSLAGYQYTEDKTEHEADSYQTWRRFSSGFVSNVID 385
>UniRef50_P46757 Cluster: Mitochondrial ribosomal protein S8; n=1;
Acanthamoeba castellanii|Rep: Mitochondrial ribosomal
protein S8 - Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 33.5 bits (73), Expect = 2.5
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +1
Query: 166 VKFLTVMMKHGYIGEFEIVDDHRAGKIV--VNLTGRLNKCGVISPRFDVPINDIERWTNL 339
+ L+V+ K GYI F I D ++ +N + VIS ++
Sbjct: 31 INVLSVLYKLGYIRGFIIKDQKNITILLKYINNKPAVRNIAVISTPGRRTYLKHKKLEKF 90
Query: 340 LPSRQFGYLVLTTSGGIMDHEXAXXKHLGGKIL 438
L + G+L+L+TS GI+ E + +GG+ L
Sbjct: 91 LTKKDSGFLILSTSKGILTDEESNMFKIGGEAL 123
>UniRef50_Q7M8E6 Cluster: 30S ribosomal protein S8; n=26;
Epsilonproteobacteria|Rep: 30S ribosomal protein S8 -
Wolinella succinogenes
Length = 131
Score = 33.5 bits (73), Expect = 2.5
Identities = 26/99 (26%), Positives = 53/99 (53%), Gaps = 6/99 (6%)
Frame = +1
Query: 160 VIVKFLTVMMKHGYIGEFEIVDDHRAGKIVVNLTGRLNKCG--VIS--PRFDVPINDIER 327
++V L V + G+I ++++D + GK +N+ + ++ G VIS R + +
Sbjct: 31 IVVSILEVFLAKGFIESYKVID--KDGKQSINVVLKYDEKGRSVISEIKRISKSGRRVYK 88
Query: 328 WTNLLPSRQFGY--LVLTTSGGIMDHEXAXXKHLGGKIL 438
+ L + GY +V++TS G++ +E A ++GG+ L
Sbjct: 89 GRDELKRFKNGYGTIVVSTSKGVIGNEEAYKANVGGEAL 127
>UniRef50_A0G972 Cluster: Putative uncharacterized protein
precursor; n=1; Burkholderia phymatum STM815|Rep:
Putative uncharacterized protein precursor -
Burkholderia phymatum STM815
Length = 287
Score = 32.7 bits (71), Expect = 4.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +3
Query: 117 KRGKRQVLIRPXFQSHR*VFNSDDEARLHRRV 212
+RG+R V++ P F R V + D RLHRR+
Sbjct: 83 RRGRRAVILHPRFPRLRTVGGTPDRLRLHRRI 114
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,530,476
Number of Sequences: 1657284
Number of extensions: 7196811
Number of successful extensions: 13676
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 13431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13658
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 27290400475
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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