Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L10
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 225 1e-59
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 225 1e-59
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 149 1e-36
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 148 3e-36
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 148 3e-36
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 99 2e-21
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 86 1e-17
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 69 3e-12
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 62 2e-10
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 62 2e-10
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 52 2e-07
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 46 1e-05
AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical ... 45 3e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 44 8e-05
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 42 2e-04
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 42 2e-04
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 42 3e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 40 8e-04
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical pr... 37 0.007
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 35 0.029
Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical pr... 34 0.050
L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical pr... 34 0.050
L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical pr... 34 0.050
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 34 0.050
AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical... 30 1.1
Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical pr... 29 1.4
Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical pr... 29 1.4
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 29 2.5
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 27 5.7
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 5.7
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 5.7
U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symme... 27 7.6
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 27 10.0
AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 225 bits (550), Expect = 1e-59
Identities = 106/117 (90%), Positives = 110/117 (94%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 215 STLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 385
STLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ L
Sbjct: 65 STLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 225 bits (550), Expect = 1e-59
Identities = 106/117 (90%), Positives = 110/117 (94%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 215 STLHLVLRLRGGTIEPSLRILAMKYNCEKMICRKCYARLHPRATNCRKTKCGHTNNL 385
STLHLVLRLRGG IEPSLR LA KYNC+K ICRKCYARL PRA+NCRK KCGH++ L
Sbjct: 65 STLHLVLRLRGGIIEPSLRQLAQKYNCDKQICRKCYARLPPRASNCRKKKCGHSSEL 121
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 149 bits (361), Expect = 1e-36
Identities = 73/74 (98%), Positives = 73/74 (98%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 765 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 824
Query: 215 STLHLVLRLRGGTI 256
STLHLVLRLRGG I
Sbjct: 825 STLHLVLRLRGGDI 838
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 65 STLHLVLRLRGG 76
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 141 STLHLVLRLRGG 152
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 217 STLHLVLRLRGG 228
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 293 STLHLVLRLRGG 304
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 369 STLHLVLRLRGG 380
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 521 STLHLVLRLRGG 532
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 537 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 597 STLHLVLRLRGG 608
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 613 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 672
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 673 STLHLVLRLRGG 684
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 689 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 749 STLHLVLRLRGG 760
Score = 145 bits (352), Expect = 1e-35
Identities = 71/72 (98%), Positives = 71/72 (98%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 385 VKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 445 STLHLVLRLRGG 456
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 65 STLHLVLRLRGG 76
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 141 STLHLVLRLRGG 152
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 217 STLHLVLRLRGG 228
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 293 STLHLVLRLRGG 304
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 369 STLHLVLRLRGG 380
Score = 145 bits (352), Expect = 1e-35
Identities = 71/72 (98%), Positives = 71/72 (98%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTL GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 385 VKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 445 STLHLVLRLRGG 456
Score = 89.4 bits (212), Expect = 1e-18
Identities = 43/43 (100%), Positives = 43/43 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 163
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 64
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 65 STLHLVLRLRGG 76
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 81 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 140
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 141 STLHLVLRLRGG 152
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 157 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 216
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 217 STLHLVLRLRGG 228
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 233 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 292
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 293 STLHLVLRLRGG 304
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 309 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 368
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 369 STLHLVLRLRGG 380
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 385 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 444
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 445 STLHLVLRLRGG 456
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 461 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 521 STLHLVLRLRGG 532
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 537 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 596
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 597 STLHLVLRLRGG 608
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 613 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 672
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 673 STLHLVLRLRGG 684
Score = 148 bits (358), Expect = 3e-36
Identities = 72/72 (100%), Positives = 72/72 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE
Sbjct: 689 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 748
Query: 215 STLHLVLRLRGG 250
STLHLVLRLRGG
Sbjct: 749 STLHLVLRLRGG 760
Score = 148 bits (358), Expect = 3e-36
Identities = 72/74 (97%), Positives = 73/74 (98%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK+
Sbjct: 765 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQ 824
Query: 215 STLHLVLRLRGGTI 256
STLHLVLRLRGG I
Sbjct: 825 STLHLVLRLRGGDI 838
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 99.1 bits (236), Expect = 2e-21
Identities = 44/72 (61%), Positives = 56/72 (77%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTLTGK I L++E +D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY +
Sbjct: 5 VKTLTGKEIELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGG 64
Query: 215 STLHLVLRLRGG 250
S LHLVL LRGG
Sbjct: 65 SVLHLVLALRGG 76
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 86.2 bits (204), Expect = 1e-17
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +2
Query: 32 SVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQK 211
SVKTL GKTI + ++ +DT+E +K K+Q+K G+PPDQQRLIF QLE+ R L YNI+
Sbjct: 164 SVKTLFGKTIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRD 223
Query: 212 ESTLHLVLRLR 244
E +HLV R R
Sbjct: 224 EDIIHLVSRHR 234
Score = 40.7 bits (91), Expect = 6e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +2
Query: 44 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
+TG IT VEASD I+++ K+ + + P ++ +D RT+SDYNI+ STL
Sbjct: 98 VTGDPIT--VEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTL 151
Query: 224 HL 229
L
Sbjct: 152 RL 153
Score = 34.3 bits (75), Expect = 0.050
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +2
Query: 32 SVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 130
SVKT TGKTIT+E +NVK +++DK+G+
Sbjct: 62 SVKTSTGKTITVEAP-----KNVKTEVRDKQGV 89
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 68.5 bits (160), Expect = 3e-12
Identities = 33/33 (100%), Positives = 33/33 (100%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 133
VKTLTGKTITLEVEASDTIENVKAKIQDKEGIP
Sbjct: 5 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIP 37
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E
Sbjct: 4 VKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSE 58
Query: 215 STLHLVLRLRGG 250
+T+++ L L GG
Sbjct: 59 ATIYVNLELLGG 70
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 62.5 bits (145), Expect = 2e-10
Identities = 34/72 (47%), Positives = 50/72 (69%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +AG+QLED SD I E
Sbjct: 4 VKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSE 58
Query: 215 STLHLVLRLRGG 250
+T+++ L L GG
Sbjct: 59 ATIYVNLELLGG 70
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 52.0 bits (119), Expect = 2e-07
Identities = 26/68 (38%), Positives = 40/68 (58%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 214
VK L G + ++ DT+ ++K I+ + IP L F+GK+LED ++ DYNIQK
Sbjct: 158 VKVL-GVSYAFKIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKS 216
Query: 215 STLHLVLR 238
ST+ + R
Sbjct: 217 STITMYFR 224
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 46.4 bits (105), Expect = 1e-05
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Frame = +2
Query: 50 GKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLE---DGRTLSDYNIQKEST 220
G+T TL+ ASDT+ +VKAKI +K I P+ Q+L+ L+ D TL D + + ST
Sbjct: 111 GRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFENGST 170
Query: 221 LHL 229
L L
Sbjct: 171 LRL 173
Score = 30.3 bits (65), Expect = 0.81
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +2
Query: 32 SVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 130
S+KT TGK IT+E S VK +++DK+G+
Sbjct: 4 SIKTSTGKNITVEAPKS-----VKTEVRDKQGV 31
>AF040643-4|AAB94965.1| 110|Caenorhabditis elegans Hypothetical
protein F14D2.11 protein.
Length = 110
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/72 (38%), Positives = 38/72 (52%)
Frame = +2
Query: 26 KYSVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNI 205
+Y V+ L GKT TL V ASDT+E K ++ R+ + GK L D T +YNI
Sbjct: 44 QYFVR-LNGKTRTLNVNASDTVEQGKMQLCHN----ARSTRMSYGGKPLSDQITFGEYNI 98
Query: 206 QKESTLHLVLRL 241
ST+ L R+
Sbjct: 99 SNNSTMDLHFRI 110
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 43.6 bits (98), Expect = 8e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Frame = +2
Query: 47 TGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH 226
+G L V SDTI VK I + R++ K LED TL+ YNIQ+ STL
Sbjct: 181 SGNYRNLWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLG 240
Query: 227 L 229
L
Sbjct: 241 L 241
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +2
Query: 44 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 224 HLVLRLRGG 250
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 41.9 bits (94), Expect = 2e-04
Identities = 17/69 (24%), Positives = 40/69 (57%)
Frame = +2
Query: 44 LTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
+ G + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + +
Sbjct: 584 MDGSIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAI 643
Query: 224 HLVLRLRGG 250
+L ++ RGG
Sbjct: 644 YLQVKERGG 652
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 41.5 bits (93), Expect = 3e-04
Identities = 20/44 (45%), Positives = 32/44 (72%)
Frame = +2
Query: 35 VKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGK 166
VKTL +T+ LEV A++ + ++K KI+ EGIP ++QRL +A +
Sbjct: 4 VKTLH-RTLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 40.3 bits (90), Expect = 8e-04
Identities = 21/60 (35%), Positives = 33/60 (55%)
Frame = +2
Query: 65 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 244
L V SDTI ++K +I + R++ GK LED +L+ YNIQ+ + + L L+
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWLYSHLK 269
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 39.1 bits (87), Expect = 0.002
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 65 LEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL 223
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>Z69904-3|CAA93780.1| 372|Caenorhabditis elegans Hypothetical
protein ZK20.3 protein.
Length = 372
Score = 37.1 bits (82), Expect = 0.007
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Frame = +2
Query: 38 KTLTGKTITLEVEASDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQK 211
+TLT LE+ TI VKA + ++G P+ Q+LI+ GK L+D + +
Sbjct: 57 RTLTQVNFNLELNEDQTIAEVKALVASEKGDDYAPELQKLIYNGKILDDSVKVGEVGFDS 116
Query: 212 ESTLHLVLRLRGGT-IEPS 265
+ ++L R T + PS
Sbjct: 117 SKFVVVMLSKRKVTEVAPS 135
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 35.1 bits (77), Expect = 0.029
Identities = 18/66 (27%), Positives = 39/66 (59%)
Frame = +2
Query: 41 TLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 220
++ G+ ++ +++E +K KI+ + GIP + L GK L D + L+DY + +++
Sbjct: 149 SMPGRLFSIGANKMESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY--KWDTS 206
Query: 221 LHLVLR 238
+ L++R
Sbjct: 207 VELLVR 212
>Z81568-9|CAB04599.2| 386|Caenorhabditis elegans Hypothetical
protein K08E3.7 protein.
Length = 386
Score = 34.3 bits (75), Expect = 0.050
Identities = 15/65 (23%), Positives = 33/65 (50%)
Frame = +2
Query: 38 KTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 217
KT + +TL + + IE++ ++ IP D+ ++F GK+L + D ++ +
Sbjct: 13 KTGQRRNLTLNINITGNIEDLTKDVEKLTEIPSDELEVVFCGKKLSKSTIMRDLSLTPAT 72
Query: 218 TLHLV 232
+ L+
Sbjct: 73 QIMLL 77
>L16621-4|AAO12390.1| 1595|Caenorhabditis elegans Hypothetical
protein ZK688.5b protein.
Length = 1595
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 17 TQCKYSVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 196
T + ++KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 197 YNIQKESTLHLVLR 238
I T+HLV R
Sbjct: 79 AGISDGQTVHLVDR 92
>L16621-3|AAL00883.1| 1620|Caenorhabditis elegans Hypothetical
protein ZK688.5a protein.
Length = 1620
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/74 (28%), Positives = 37/74 (50%)
Frame = +2
Query: 17 TQCKYSVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSD 196
T + ++KTL + T+ + DTI+++ + + I QR+I G+ L +T+
Sbjct: 19 TTIRVTLKTLDDREATVTIGLQDTIQSLIDLGRREMNIQSGFQRVIAGGRVLNSTQTVQA 78
Query: 197 YNIQKESTLHLVLR 238
I T+HLV R
Sbjct: 79 AGISDGQTVHLVDR 92
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 34.3 bits (75), Expect = 0.050
Identities = 21/72 (29%), Positives = 38/72 (52%)
Frame = +2
Query: 8 IXATQCKYSVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRT 187
I + K++V L G I +E+++ DTI V + G+ +QRL+ K+L+ +T
Sbjct: 178 IGSKNIKFNV-ILHGSRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQT 236
Query: 188 LSDYNIQKESTL 223
L + I+ S +
Sbjct: 237 LEEAGIKDGSVI 248
>AF040645-10|AAB94971.2| 110|Caenorhabditis elegans Hypothetical
protein F52C6.2 protein.
Length = 110
Score = 29.9 bits (64), Expect = 1.1
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +2
Query: 32 SVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQ-LEDGRTLSDYNIQ 208
S+KT TGKTIT+E S VK +++ K+G+ AG Q +E T+ D IQ
Sbjct: 4 SIKTSTGKTITVEAPKS-----VKTEVRYKQGVVFAVSYDKDAGNQIIEMEDTVQDVKIQ 58
Query: 209 K 211
+
Sbjct: 59 E 59
>Z99281-7|CAC42379.1| 77|Caenorhabditis elegans Hypothetical
protein Y57G11C.9c protein.
Length = 77
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 28 IFRQNPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 141
++ N YG +++ GGG FRH + N Y++ P
Sbjct: 1 MYHNNNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-6|CAB54458.2| 625|Caenorhabditis elegans Hypothetical
protein Y57G11C.9b protein.
Length = 625
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 28 IFRQNPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 141
++ N YG +++ GGG FRH + N Y++ P
Sbjct: 1 MYHNNNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z99281-5|CAB54457.1| 553|Caenorhabditis elegans Hypothetical
protein Y57G11C.9a protein.
Length = 553
Score = 29.5 bits (63), Expect = 1.4
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 28 IFRQNPYGEDHYIGGGSFRHYRKCQS*NPRQGRYSSRP 141
++ N YG +++ GGG FRH + N Y++ P
Sbjct: 1 MYHNNNYGYNNHRGGGGFRHNNYNNNNNNHHHHYNNLP 38
>Z80215-7|CAB02274.1| 674|Caenorhabditis elegans Hypothetical
protein C36B1.9 protein.
Length = 674
Score = 29.5 bits (63), Expect = 1.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +2
Query: 308 CRKCYARLHPRATNCRKTKCGHT 376
CR CY H + R +CGHT
Sbjct: 63 CRVCYDEYHSSSNQARVLQCGHT 85
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 28.7 bits (61), Expect = 2.5
Identities = 16/65 (24%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +2
Query: 65 LEVEASDTIENVKAKIQDK-EGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 241
+EV S I V+ K+ + + L + G++L+D R++ YNI + ++L +
Sbjct: 100 VEVRNSYLIRYVRVKVANLLNNDLVESFNLYYGGQKLQDNRSIGSYNIDQSREIYLKKKK 159
Query: 242 RGGTI 256
+ T+
Sbjct: 160 KLSTL 164
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 122 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 274
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1463 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1514
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 122 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 274
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 122 EGIP-PDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRI 274
EG P PD + + G QL DG L +I+K + RGG E L I
Sbjct: 1526 EGYPAPDVRWVDSHGNQLSDGPLLRIIDIRKTLNAKCLAENRGGLKETDLTI 1577
>U41994-13|AAK31527.2| 1425|Caenorhabditis elegans Neuronal symmetry
protein 1 protein.
Length = 1425
Score = 27.1 bits (57), Expect = 7.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 164 KQLEDGRTLSDYNIQKESTLHLVLRLRGGTIEPSLRILAMK 286
K ++D R L DY+ K ++L L +I+P LR L +K
Sbjct: 1173 KMIDDIRGLLDYDTAKIGQINLALYHFSDSIQPVLRRLDIK 1213
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 26.6 bits (56), Expect = 10.0
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -2
Query: 108 LALTFSIVSEASTSNVMVFP---VRVLTEYLHCVAXM 7
+A+ F + + N+ VF + VLTEYL C+ M
Sbjct: 486 VAVIFEEIPPETDQNISVFEDPTIEVLTEYLDCIITM 522
>AF003130-4|AAB54126.1| 1043|Caenorhabditis elegans Hypothetical
protein F55A12.8 protein.
Length = 1043
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +2
Query: 53 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 151
KT+ +V+ T+E ++ +I+ + +PP QRL
Sbjct: 664 KTVIKQVKDGHTVELLEERIEPRADLPPLLQRL 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,629,367
Number of Sequences: 27780
Number of extensions: 241664
Number of successful extensions: 663
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 663
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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