Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L09
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0356 + 2557127-2557193,2557272-2557315,2557433-2557528,255... 65 4e-11
05_06_0234 - 26602660-26602728,26602814-26602988,26603077-266031... 63 2e-10
06_03_0740 - 24006485-24006629,24006821-24006864,24006954-240071... 47 2e-05
01_06_0465 - 29573972-29574110,29574300-29574343,29574434-295746... 43 2e-04
04_04_0122 - 22918146-22918220,22918455-22918496,22918586-229186... 39 0.004
02_04_0344 - 22171401-22171448,22171725-22171760,22171996-221720... 37 0.016
05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948 28 7.5
05_03_0077 + 8200529-8200541,8200658-8200701,8200793-8200888,820... 27 9.9
>06_01_0356 +
2557127-2557193,2557272-2557315,2557433-2557528,
2559259-2559351,2559450-2559540,2559617-2559678,
2559754-2559938,2560022-2560199,2560293-2560336,
2560440-2560635,2560728-2560745,2560955-2561005
Length = 374
Score = 65.3 bits (152), Expect = 4e-11
Identities = 50/148 (33%), Positives = 70/148 (47%)
Frame = +2
Query: 206 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 385
H + + +L PNVR+R+ LR +Q + +IE KF+ E A R IVN
Sbjct: 47 HTDVLEALSPNVRKRVEYLREIQGQHDEIELKFFEERAALEAKYQKLYEPLYTKRYNIVN 106
Query: 386 GTYEPNDDECLNPWRDDTEXXELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWY 565
G E ++ D+ A +NAA EG+ D + KG+PDFW
Sbjct: 107 GVVE------VDGGNDEP-------ASENAA--EGK------------DADAKGVPDFWL 139
Query: 566 NIFRNVSMLSEMMQEHDEPILKCLQDIK 649
+ +LSE +QE DEP LK L+DIK
Sbjct: 140 TAMKTNEVLSEEIQERDEPALKYLKDIK 167
>05_06_0234 -
26602660-26602728,26602814-26602988,26603077-26603120,
26603204-26603381,26603468-26603652,26603737-26603801,
26603985-26604066,26604342-26604434,26605096-26605191,
26605312-26605355,26605467-26605530
Length = 364
Score = 63.3 bits (147), Expect = 2e-10
Identities = 47/148 (31%), Positives = 66/148 (44%)
Frame = +2
Query: 206 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 385
H + + SL P VR+R+ LR +Q + D+EAKF+ E A R IVN
Sbjct: 46 HTDVLESLEPKVRKRVEVLREIQSQHDDLEAKFFEERAALEAKYQKMYEPLYSKRYEIVN 105
Query: 386 GTYEPNDDECLNPWRDDTEXXELARAVQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWY 565
G E + + AA E+K++ KG+P+FW
Sbjct: 106 GVVEVDG------------------VTKEAADETPAEQKEE-----------KGVPEFWL 136
Query: 566 NIFRNVSMLSEMMQEHDEPILKCLQDIK 649
N +N +LSE +QE DE LK L+DIK
Sbjct: 137 NAMKNHEILSEEIQERDEEALKYLKDIK 164
>06_03_0740 -
24006485-24006629,24006821-24006864,24006954-24007122,
24007226-24007413,24007572-24007634,24007992-24008084,
24009837-24009932,24010024-24010067,24010184-24010357,
24010764-24010974
Length = 408
Score = 46.8 bits (106), Expect = 2e-05
Identities = 20/42 (47%), Positives = 27/42 (64%)
Frame = +2
Query: 524 PMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIK 649
P+ KG+PDFW N +N +L+E + E DE LK L+DIK
Sbjct: 202 PLYSKEKGVPDFWLNAMKNNEILAEEIHESDEEALKYLKDIK 243
Score = 35.5 bits (78), Expect = 0.037
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +2
Query: 206 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSE 313
H + + SL P+VR+R+ L +Q + ++E KF+ E
Sbjct: 153 HVDVLESLAPSVRKRVDVLMEIQSQHDELEVKFFEE 188
>01_06_0465 -
29573972-29574110,29574300-29574343,29574434-29574602,
29574707-29574894,29575081-29575145,29575257-29575311,
29575502-29575594,29576035-29576130,29576259-29576302,
29576419-29576431
Length = 301
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 542 KGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIK 649
KG+PDFW +N +L+E + E DE LK L+DIK
Sbjct: 103 KGVPDFWLKAMKNNEILAEEIHESDEEALKYLKDIK 138
Score = 38.7 bits (86), Expect = 0.004
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 12/154 (7%)
Frame = +2
Query: 206 HAEAMASLPPNVRRRIRALRTLQKEFVDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVN 385
H + + SL P VR+R+ L +Q + ++EAKF E A R+ IV+
Sbjct: 29 HVDVLESLAPVVRKRVDVLIEIQSQHDELEAKFLEEKAALEANYQKLYGPLYSKRSEIVS 88
Query: 386 GTYEPNDDECLNPWRDDTEXXELARAVQNAAITEGEEKKDDKAIEPPMD------PNVKG 547
G E + E L N + E + D++A++ D + KG
Sbjct: 89 GVLEV-EGETEEREEKGVPDFWLKAMKNNEILAEEIHESDEEALKYLKDIKWCRIDDPKG 147
Query: 548 IP-DFWYN---IFRN--VSMLSEMMQEHDEPILK 631
+F+++ F+N ++ M+ E DEPIL+
Sbjct: 148 FKFEFFFDTNPFFKNQVLTKTYHMIDEDDEPILE 181
>04_04_0122 -
22918146-22918220,22918455-22918496,22918586-22918642,
22918784-22918844,22919219-22919280,22919372-22919485,
22919565-22919636,22919824-22919874,22919990-22920112,
22921261-22921383
Length = 259
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = +2
Query: 539 VKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKV 652
+K IPDFW F + ML E++ E D+ I K L+ I V
Sbjct: 72 IKQIPDFWLTAFLSHPMLGELLTEDDQKIFKHLESIDV 109
>02_04_0344 -
22171401-22171448,22171725-22171760,22171996-22172056,
22173246-22173304,22173384-22173497,22173575-22173646,
22173786-22173836,22173935-22174057,22175154-22175291
Length = 233
Score = 36.7 bits (81), Expect = 0.016
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +2
Query: 539 VKGIPDFWYNIFRNVSMLSEMMQEHDEPILKCLQDIKV 652
++ IPDFW F + +LSE++ E D+ + K L+ + V
Sbjct: 77 IQTIPDFWLTAFLSHPLLSELLTEEDQKMFKYLESVDV 114
>05_05_0163 + 22842955-22844371,22845519-22845592,22845913-22845948
Length = 508
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/51 (27%), Positives = 28/51 (54%)
Frame = -3
Query: 436 VITPWVETFIIIRFICAIHNKSSLFIKRLVKFFIFAFECMYFTVKLGLNVD 284
V+ PW+++F I + +H+K +L K +K A + + +K G+ +D
Sbjct: 459 VLPPWLDSFPIPNAVLCLHSKINLSGKNNMKNETLA-DILVINIKTGILMD 508
>05_03_0077 +
8200529-8200541,8200658-8200701,8200793-8200888,
8201585-8201639,8201753-8201817,8202309-8202434,
8202742-8202903
Length = 186
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 542 KGIPDFWYNIFRNVSMLSE 598
KG+PDFW N + +L+E
Sbjct: 72 KGVPDFWLNAMKKNEILAE 90
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,195,851
Number of Sequences: 37544
Number of extensions: 305820
Number of successful extensions: 719
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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