BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_L07
(517 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054875-1|AAH54875.1| 89|Homo sapiens TIMM9 protein protein. 79 7e-15
BC020213-1|AAH20213.1| 89|Homo sapiens translocase of inner mi... 79 7e-15
AF152353-1|AAF15103.1| 89|Homo sapiens TIMM9 protein. 79 7e-15
AF150100-1|AAD40006.1| 89|Homo sapiens small zinc finger-like ... 79 7e-15
BC011014-1|AAH11014.1| 103|Homo sapiens fracture callus 1 homol... 43 7e-04
AF183415-1|AAG09684.1| 103|Homo sapiens fracture callus protein. 43 7e-04
AF152355-1|AAF15105.1| 103|Homo sapiens FXC1 protein. 43 7e-04
AF150105-1|AAD40011.1| 103|Homo sapiens small zinc finger-like ... 43 7e-04
X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for ... 34 0.34
U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor ... 34 0.34
CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein. 34 0.34
BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport facto... 34 0.34
BC008607-1|AAH08607.1| 95|Homo sapiens translocase of inner mi... 32 1.0
AF152352-1|AAF15102.1| 95|Homo sapiens TIMM13b protein. 32 1.0
AF152351-1|AAF15101.1| 95|Homo sapiens TIMM13a protein. 32 1.0
AF144700-1|AAD39951.1| 95|Homo sapiens small zinc finger-like ... 32 1.0
BC030811-1|AAH30811.1| 504|Homo sapiens KLF4 protein protein. 29 9.7
AL360218-3|CAI12255.1| 504|Homo sapiens Kruppel-like factor 4 (... 29 9.7
>BC054875-1|AAH54875.1| 89|Homo sapiens TIMM9 protein protein.
Length = 89
Score = 79.4 bits (187), Expect = 7e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 168 YNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENMLA 347
YNKL+E CF DC+ DFT+R +K E C+ +C++KYL+M QR+S RF E+ + NE + A
Sbjct: 21 YNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAA 80
Query: 348 LAQKSGNP 371
A G P
Sbjct: 81 KAGLLGQP 88
>BC020213-1|AAH20213.1| 89|Homo sapiens translocase of inner
mitochondrial membrane 9 homolog (yeast) protein.
Length = 89
Score = 79.4 bits (187), Expect = 7e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 168 YNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENMLA 347
YNKL+E CF DC+ DFT+R +K E C+ +C++KYL+M QR+S RF E+ + NE + A
Sbjct: 21 YNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAA 80
Query: 348 LAQKSGNP 371
A G P
Sbjct: 81 KAGLLGQP 88
>AF152353-1|AAF15103.1| 89|Homo sapiens TIMM9 protein.
Length = 89
Score = 79.4 bits (187), Expect = 7e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 168 YNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENMLA 347
YNKL+E CF DC+ DFT+R +K E C+ +C++KYL+M QR+S RF E+ + NE + A
Sbjct: 21 YNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAA 80
Query: 348 LAQKSGNP 371
A G P
Sbjct: 81 KAGLLGQP 88
>AF150100-1|AAD40006.1| 89|Homo sapiens small zinc finger-like
protein protein.
Length = 89
Score = 79.4 bits (187), Expect = 7e-15
Identities = 33/68 (48%), Positives = 46/68 (67%)
Frame = +3
Query: 168 YNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENMLA 347
YNKL+E CF DC+ DFT+R +K E C+ +C++KYL+M QR+S RF E+ + NE + A
Sbjct: 21 YNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYHIQQNEALAA 80
Query: 348 LAQKSGNP 371
A G P
Sbjct: 81 KAGLLGQP 88
>BC011014-1|AAH11014.1| 103|Homo sapiens fracture callus 1 homolog
(rat) protein.
Length = 103
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 159 LLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRV 296
LL YN+++ELCF C+ R L + E+ C +C K + N R+
Sbjct: 18 LLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
>AF183415-1|AAG09684.1| 103|Homo sapiens fracture callus protein.
Length = 103
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 159 LLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRV 296
LL YN+++ELCF C+ R L + E+ C +C K + N R+
Sbjct: 18 LLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
>AF152355-1|AAF15105.1| 103|Homo sapiens FXC1 protein.
Length = 103
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 159 LLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRV 296
LL YN+++ELCF C+ R L + E+ C +C K + N R+
Sbjct: 18 LLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
>AF150105-1|AAD40011.1| 103|Homo sapiens small zinc finger-like
protein protein.
Length = 103
Score = 42.7 bits (96), Expect = 7e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 159 LLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRV 296
LL YN+++ELCF C+ R L + E+ C +C K + N R+
Sbjct: 18 LLVYNRMTELCFQRCVPSLHHRALDAEEEACLHSCAGKLIHSNHRL 63
>X07315-1|CAA30278.1| 127|Homo sapiens protein ( Human gene for
PP15 (placental protein 15). ).
Length = 127
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 144 FQGISLLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQM 323
FQG + + KLS L F H T++ + T D C ++ + L+ ++ FH+ +
Sbjct: 46 FQGKAAI-VEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFL 104
Query: 324 LANEN 338
L N N
Sbjct: 105 LKNIN 109
>U43939-1|AAA85905.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 144 FQGISLLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQM 323
FQG + + KLS L F H T++ + T D C ++ + L+ ++ FH+ +
Sbjct: 46 FQGKAAI-VEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFL 104
Query: 324 LANEN 338
L N N
Sbjct: 105 LKNIN 109
>CR456937-1|CAG33218.1| 127|Homo sapiens NUTF2 protein.
Length = 127
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 144 FQGISLLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQM 323
FQG + + KLS L F H T++ + T D C ++ + L+ ++ FH+ +
Sbjct: 46 FQGKAAI-VEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFL 104
Query: 324 LANEN 338
L N N
Sbjct: 105 LKNIN 109
>BC002348-1|AAH02348.1| 127|Homo sapiens nuclear transport factor 2
protein.
Length = 127
Score = 33.9 bits (74), Expect = 0.34
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = +3
Query: 144 FQGISLLQYNKLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQM 323
FQG + + KLS L F H T++ + T D C ++ + L+ ++ FH+ +
Sbjct: 46 FQGKAAI-VEKLSSLPFQKIQHSITAQDHQPTPDSCIISMVVGQLKADEDPIMGFHQMFL 104
Query: 324 LANEN 338
L N N
Sbjct: 105 LKNIN 109
>BC008607-1|AAH08607.1| 95|Homo sapiens translocase of inner
mitochondrial membrane 13 homolog (yeast) protein.
Length = 95
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 174 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENM 341
++++ CF CI +L ++E KC CM++Y+ VS+ ++ NM
Sbjct: 41 RMTDKCFRKCIGK-PGGSLDNSEQKCIAMCMDRYMDAWNTVSRAYNSRLQRERANM 95
>AF152352-1|AAF15102.1| 95|Homo sapiens TIMM13b protein.
Length = 95
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 174 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENM 341
++++ CF CI +L ++E KC CM++Y+ VS+ ++ NM
Sbjct: 41 RMTDKCFRKCIGK-PGGSLDNSEQKCIAMCMDRYMDAWNTVSRAYNSRLQRERANM 95
>AF152351-1|AAF15101.1| 95|Homo sapiens TIMM13a protein.
Length = 95
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 174 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENM 341
++++ CF CI +L ++E KC CM++Y+ VS+ ++ NM
Sbjct: 41 RMTDKCFRKCIGK-PGGSLDNSEQKCIAMCMDRYMDAWNTVSRAYNSRLQRERANM 95
>AF144700-1|AAD39951.1| 95|Homo sapiens small zinc finger-like
protein protein.
Length = 95
Score = 32.3 bits (70), Expect = 1.0
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +3
Query: 174 KLSELCFNDCIHDFTSRTLKSTEDKCTVNCMEKYLRMNQRVSQRFHEFQMLANENM 341
++++ CF CI +L ++E KC CM++Y+ VS+ ++ NM
Sbjct: 41 RMTDKCFRKCIGK-PGGSLDNSEQKCIAMCMDRYMDAWNTVSRAYNSRLQRERANM 95
>BC030811-1|AAH30811.1| 504|Homo sapiens KLF4 protein protein.
Length = 504
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 339 CFHWQAFGTHGIFVKPSDSFVDISP 265
C W FGTHG+ + P S +++ P
Sbjct: 371 CVCWPHFGTHGMMLTPPSSPLELMP 395
>AL360218-3|CAI12255.1| 504|Homo sapiens Kruppel-like factor 4
(gut) protein.
Length = 504
Score = 29.1 bits (62), Expect = 9.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 339 CFHWQAFGTHGIFVKPSDSFVDISP 265
C W FGTHG+ + P S +++ P
Sbjct: 371 CVCWPHFGTHGMMLTPPSSPLELMP 395
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,061,961
Number of Sequences: 237096
Number of extensions: 1080849
Number of successful extensions: 1981
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1981
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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