Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L06
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    24   0.63 
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   5.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   5.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.8  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.8  

>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -2

Query: 149 LALGSVPLPWTFCTVIPCVLCGIYI 75
           L   ++PL  +FC V+ C    +Y+
Sbjct: 142 LLFATLPLRLSFCVVLACSTATVYV 166


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = +3

Query: 33  KWCTYQNSAGRTAKNVNATKYTRYHSTKSPRQ 128
           +W TYQ +      N    KY  Y  ++ P +
Sbjct: 394 RWFTYQETVDPAGCNAGPAKY--YLKSRDPER 423


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.0 bits (42), Expect = 5.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = -2

Query: 140 GSVPLPWTFCTVIPCVLCGIYIFCS 66
           G++ L  T C VIP +L  +  F S
Sbjct: 219 GTIILKKTVCFVIPIMLLFLAFFVS 243


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 180 TVVSPNPSSKRRQK 221
           TVVSP P+ +R  K
Sbjct: 900 TVVSPPPTKRRTMK 913


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +3

Query: 180 TVVSPNPSSKRRQK 221
           TVVSP P+ +R  K
Sbjct: 938 TVVSPPPTKRRTMK 951


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 205 EDGFGLTTVSPAVYDHNV 152
           E+G G+TT  P +Y  ++
Sbjct: 4   EEGLGVTTGQPNLYKQDL 21


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,953
Number of Sequences: 438
Number of extensions: 1723
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)