Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L02
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    25   0.40 
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    24   1.2  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   3.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   3.8  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    22   3.8  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   8.7  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   8.7  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    21   8.7  
AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein pr...    21   8.7  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 25.4 bits (53), Expect = 0.40
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +1

Query: 4   LVNHCEGLNRIFGFICI 54
           L + C+ +NRIFGFI I
Sbjct: 523 LCDVCDSVNRIFGFIII 539


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 364 LAPITNITVSPRRFAPSSMAIS 299
           ++ ITN T+ P R +PSS  IS
Sbjct: 52  ISQITNSTLDPGRKSPSSPRIS 73


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 344 NRFAKKICSKFNGHF 300
           N++ K++C   NGH+
Sbjct: 199 NQYIKQVCKLNNGHY 213


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -3

Query: 344 NRFAKKICSKFNGHF 300
           N++ K++C   NGH+
Sbjct: 24  NQYIKQVCKLNNGHY 38


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = +3

Query: 45  YLYLFLNNPYNMVVGAFPIAKLSVLLVKQISKPIAN 152
           Y Y  L+NPY        +A+   + V Q+S    N
Sbjct: 248 YFYSHLSNPYPSEEAKEELARKCGITVSQVSNWFGN 283


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/32 (21%), Positives = 14/32 (43%)
 Frame = -2

Query: 633 YVQERDYLVWHXVVXSHLYYLCQRMGCFWVLD 538
           Y  + D L+WH     H+  +   +   W ++
Sbjct: 197 YYLQADMLLWHTFGYYHILAMLNCLCSLWFIN 228


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/32 (21%), Positives = 14/32 (43%)
 Frame = -2

Query: 633 YVQERDYLVWHXVVXSHLYYLCQRMGCFWVLD 538
           Y  + D L+WH     H+  +   +   W ++
Sbjct: 197 YYLQADMLLWHTFGYYHILAMLNCLCSLWFIN 228


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = +1

Query: 121 W*NR*VNQSRTCARREPRIIHFSELMFVCLQRNFTIGVKLKPK 249
           W N   N S      + + I   E+ F+ +  N T+GV  +P+
Sbjct: 458 WTNFARNGSPNVDEPDWKPISKEEIHFIDIGENITVGVNPEPE 500


>AJ606487-1|CAE55183.1|  203|Tribolium castaneum Giant protein
           protein.
          Length = 203

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -3

Query: 368 KASTNYEYNRFAKKICSKFNGHFLA*NRNIDRFS 267
           K  ++  +N F  KI ++ +G     N+N+ R S
Sbjct: 93  KKDSSEAFNEFRTKILAQVHGTNNGTNKNMRRLS 126


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,144
Number of Sequences: 336
Number of extensions: 3585
Number of successful extensions: 17
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)