Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L02
         (640 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0991 + 7851791-7851919,7852770-7852904,7853064-7853153,785...    57   1e-08
07_01_1152 - 10837540-10839549                                         27   9.5  

>01_01_0991 +
           7851791-7851919,7852770-7852904,7853064-7853153,
           7853750-7853785,7854256-7854417
          Length = 183

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 32/103 (31%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
 Frame = +3

Query: 90  AFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTY-VCMPPAQFYNWCEVKAKMWILNL 266
           + P+AKL  L ++ +SKPIA+  K +A  +P FR + +C+  AQ  +    + +  I   
Sbjct: 2   SLPVAKLGTLALRTLSKPIASRLKNQAAVHPKFRNFIICI--AQINHRVTTRIQRRIYGH 59

Query: 267 GKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNRQS 395
              V I  L++E A++   +L+GE  IF +  + L+ E  R +
Sbjct: 60  ATDVEITPLNEEKAVQAATDLIGEGFIFSVAVAALIFEVQRNA 102


>07_01_1152 - 10837540-10839549
          Length = 669

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -3

Query: 278 DRFSQI*NPHFGFNFTPIVKLRWRHTNISSEK 183
           D F  I N H G N   ++ L+  HT    +K
Sbjct: 150 DEFKDIDNNHVGININSLISLQAHHTGYYDDK 181


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,531,023
Number of Sequences: 37544
Number of extensions: 324709
Number of successful extensions: 720
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1573040476
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)