Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L02
         (640 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118558-1|AAM49927.1|  255|Drosophila melanogaster LD37258p pro...   180   1e-45
AE014297-3405|AAF56203.1|  255|Drosophila melanogaster CG13601-P...   180   1e-45
AE014297-3406|ABI31200.1|  268|Drosophila melanogaster CG13602-P...   124   1e-28
AY084091-1|AAL89829.1|  111|Drosophila melanogaster AT03227p pro...    96   3e-20
AE014297-3407|AAF56204.2|  111|Drosophila melanogaster CG13602-P...    96   3e-20

>AY118558-1|AAM49927.1|  255|Drosophila melanogaster LD37258p
           protein.
          Length = 255

 Score =  180 bits (439), Expect = 1e-45
 Identities = 80/148 (54%), Positives = 106/148 (71%)
 Frame = +3

Query: 78  MVVGAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWI 257
           MV+G FP AKL +L +KQ+SKPIANV K  AK++PFFR Y+CMPPAQFYNW EVK KMW 
Sbjct: 1   MVIGVFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYNWVEVKTKMWA 60

Query: 258 LNLGKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNRQSXXXXXXXXXXXXXX 437
           LN+G  VN+P L++ MAIELGANLLGE +IF IGA LL+ EY+RQ+              
Sbjct: 61  LNMGGRVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYSRQTIKENKKNELAQSEK 120

Query: 438 XHITSTITDLYFTVQKQQTQLRXMERLI 521
             +T+ +T++ F +++Q  Q+R M R++
Sbjct: 121 MELTNMLTEMNFRLERQDAQIREMTRVL 148


>AE014297-3405|AAF56203.1|  255|Drosophila melanogaster CG13601-PA
           protein.
          Length = 255

 Score =  180 bits (439), Expect = 1e-45
 Identities = 80/148 (54%), Positives = 106/148 (71%)
 Frame = +3

Query: 78  MVVGAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWI 257
           MV+G FP AKL +L +KQ+SKPIANV K  AK++PFFR Y+CMPPAQFYNW EVK KMW 
Sbjct: 1   MVIGVFPAAKLGILAIKQVSKPIANVIKSNAKSSPFFRKYICMPPAQFYNWVEVKTKMWA 60

Query: 258 LNLGKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNRQSXXXXXXXXXXXXXX 437
           LN+G  VN+P L++ MAIELGANLLGE +IF IGA LL+ EY+RQ+              
Sbjct: 61  LNMGGRVNVPPLNEAMAIELGANLLGEFIIFSIGAGLLIFEYSRQTIKENKKNELAQSEK 120

Query: 438 XHITSTITDLYFTVQKQQTQLRXMERLI 521
             +T+ +T++ F +++Q  Q+R M R++
Sbjct: 121 MELTNMLTEMNFRLERQDAQIREMTRVL 148


>AE014297-3406|ABI31200.1|  268|Drosophila melanogaster CG13602-PB,
           isoform B protein.
          Length = 268

 Score =  124 bits (298), Expect = 1e-28
 Identities = 56/106 (52%), Positives = 80/106 (75%)
 Frame = +3

Query: 78  MVVGAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWI 257
           MVVG FP+AKL++L +K ISKPI N+ K+ AK N  F+T V  PPA+ Y+  +V++KMW+
Sbjct: 1   MVVGVFPLAKLALLAIKHISKPIGNLIKQTAKKNKSFKTLVVAPPARLYHVIDVRSKMWM 60

Query: 258 LNLGKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNRQS 395
           L LG+P  IP L+  M I++G ++LGE VIF+IGA+L+V E+ RQ+
Sbjct: 61  LGLGQPRLIPPLTDAMTIQMGGDILGEMVIFIIGATLIVGEFKRQA 106



 Score = 83.4 bits (197), Expect = 2e-16
 Identities = 41/101 (40%), Positives = 62/101 (61%)
 Frame = +3

Query: 87  GAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWILNL 266
           G     K+ +  VK+ISKP  ++     K++PF R Y+ +PPAQ YN  EV++K+ +L L
Sbjct: 161 GDLEFGKIFIHGVKRISKPFGDLLIWMGKHHPFIRRYIIIPPAQLYNTFEVRSKLRMLRL 220

Query: 267 GKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNR 389
            +P  IP LS  +A  LGA++L E  +F IGA L+  E ++
Sbjct: 221 KQPRRIPPLSTPVATRLGADMLSEAFVFGIGAGLIYYELSK 261


>AY084091-1|AAL89829.1|  111|Drosophila melanogaster AT03227p
           protein.
          Length = 111

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 45/104 (43%), Positives = 69/104 (66%)
 Frame = +3

Query: 78  MVVGAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWI 257
           MV+G+FP+ K+ +  VK+ISKP  ++     K++PF R Y+ +PPAQ YN  EV++K+ +
Sbjct: 1   MVIGSFPVGKIFIHGVKRISKPFGDLLIWMGKHHPFIRRYIIIPPAQLYNTFEVRSKLRM 60

Query: 258 LNLGKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNR 389
           L L +P  IP LS  +A  LGA++L E  +F IGA L+  E ++
Sbjct: 61  LRLKQPRRIPPLSTPVATRLGADMLSEAFVFGIGAGLIYYELSK 104


>AE014297-3407|AAF56204.2|  111|Drosophila melanogaster CG13602-PA,
           isoform A protein.
          Length = 111

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 45/104 (43%), Positives = 69/104 (66%)
 Frame = +3

Query: 78  MVVGAFPIAKLSVLLVKQISKPIANVCKERAKNNPFFRTYVCMPPAQFYNWCEVKAKMWI 257
           MV+G+FP+ K+ +  VK+ISKP  ++     K++PF R Y+ +PPAQ YN  EV++K+ +
Sbjct: 1   MVIGSFPVGKIFIHGVKRISKPFGDLLIWMGKHHPFIRRYIIIPPAQLYNTFEVRSKLRM 60

Query: 258 LNLGKPVNIPVLSQEMAIELGANLLGETVIFVIGASLLVIEYNR 389
           L L +P  IP LS  +A  LGA++L E  +F IGA L+  E ++
Sbjct: 61  LRLKQPRRIPPLSTPVATRLGADMLSEAFVFGIGAGLIYYELSK 104


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,253,474
Number of Sequences: 53049
Number of extensions: 578529
Number of successful extensions: 1270
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)