Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_L02
         (640 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    23   3.3  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   5.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   5.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.6  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 474  TVQKQQTQLRXMERLIHSIGG 536
            T Q+Q  Q   M+R+I  IGG
Sbjct: 1071 TNQQQSIQTSGMQRIIAQIGG 1091


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 9/90 (10%)
 Frame = +3

Query: 39  WIYLYLFLNNPYNM-----VVGAFPI----AKLSVLLVKQISKPIANVCKERAKNNPFFR 191
           ++ LY +L + ++      VVG  P+        ++LVK+ +        E+ KN P   
Sbjct: 15  FLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKDLILVKKSTAHFVKDIYEKYKNEPMVG 74

Query: 192 TYVCMPPAQFYNWCEVKAKMWILNLGKPVN 281
            Y    P    N  E+   + I +  K  N
Sbjct: 75  LYATRSPFLLLNDPELIKDILIRDFSKFAN 104


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +3

Query: 534 GDQAPKNSPSSDKDSTNGXSPP-XATLNNHVPE 629
           G+ A  N  SSD  +     PP  A+ N H  E
Sbjct: 253 GNAAGNNEDSSDSGAAASDRPPASASSNEHEAE 285


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 505 KWKGLFILLVEIKHPKTAH 561
           K K L I+L +IKH  T H
Sbjct: 210 KLKELRIILEDIKHINTRH 228


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,111
Number of Sequences: 438
Number of extensions: 3905
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)