Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_K23
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC024162-1|AAH24162.1| 612|Homo sapiens integrin alpha FG-GAP r... 81 4e-15
BC006321-1|AAH06321.2| 612|Homo sapiens integrin alpha FG-GAP r... 81 4e-15
AK027596-1|BAB55220.1| 612|Homo sapiens protein ( Homo sapiens ... 81 4e-15
AF503339-1|AAN31655.1| 612|Homo sapiens T-cell immunomodulatory... 81 4e-15
AF212247-1|AAG41782.1| 609|Homo sapiens CDA08 protein. 75 2e-13
X55283-1|CAA38997.1| 287|Homo sapiens asialoglycoprotein recept... 31 3.4
BC017251-1|AAH17251.1| 287|Homo sapiens asialoglycoprotein rece... 31 3.4
AF529374-1|AAQ09608.1| 306|Homo sapiens HBxAg-binding protein p... 31 3.4
>BC024162-1|AAH24162.1| 612|Homo sapiens integrin alpha FG-GAP
repeat containing 1 protein.
Length = 612
Score = 80.6 bits (190), Expect = 4e-15
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 DITXSSFGKYSEGIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPS-EFACNF 396
++T FG + G +AAFGD NSD+ TD FV++ + + VFLA P+ +P + +
Sbjct: 36 NVTAELFGAEAWGTLAAFGDLNSDKQTDLFVLRERNDLIVFLADQNAPYFKPKVKVSFKN 95
Query: 397 SDIVITXIVPXDYDGDAYMDILLTTQNVNNTSKFHNVSILWGR 525
+IT +VP DYDGD+ MD+LLT N I WG+
Sbjct: 96 HSALITSVVPGDYDGDSQMDVLLTYLPKNYAKSELGAVIFWGQ 138
>BC006321-1|AAH06321.2| 612|Homo sapiens integrin alpha FG-GAP
repeat containing 1 protein.
Length = 612
Score = 80.6 bits (190), Expect = 4e-15
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 DITXSSFGKYSEGIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPS-EFACNF 396
++T FG + G +AAFGD NSD+ TD FV++ + + VFLA P+ +P + +
Sbjct: 36 NVTAELFGAEAWGTLAAFGDLNSDKQTDLFVLRERNDLIVFLADQNAPYFKPKVKVSFKN 95
Query: 397 SDIVITXIVPXDYDGDAYMDILLTTQNVNNTSKFHNVSILWGR 525
+IT +VP DYDGD+ MD+LLT N I WG+
Sbjct: 96 HSALITSVVPGDYDGDSQMDVLLTYLPKNYAKSELGAVIFWGQ 138
>AK027596-1|BAB55220.1| 612|Homo sapiens protein ( Homo sapiens
cDNA FLJ14690 fis, clone NT2RP2005270. ).
Length = 612
Score = 80.6 bits (190), Expect = 4e-15
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 DITXSSFGKYSEGIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPS-EFACNF 396
++T FG + G +AAFGD NSD+ TD FV++ + + VFLA P+ +P + +
Sbjct: 36 NVTAELFGAEAWGTLAAFGDLNSDKQTDLFVLRERNDLIVFLADQNAPYFKPKVKVSFKN 95
Query: 397 SDIVITXIVPXDYDGDAYMDILLTTQNVNNTSKFHNVSILWGR 525
+IT +VP DYDGD+ MD+LLT N I WG+
Sbjct: 96 HSALITSVVPGDYDGDSQMDVLLTYLPKNYAKSELGAVIFWGQ 138
>AF503339-1|AAN31655.1| 612|Homo sapiens T-cell immunomodulatory
protein protein.
Length = 612
Score = 80.6 bits (190), Expect = 4e-15
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
Frame = +1
Query: 220 DITXSSFGKYSEGIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPS-EFACNF 396
++T FG + G +AAFGD NSD+ TD FV++ + + VFLA P+ +P + +
Sbjct: 36 NVTAELFGAEAWGTLAAFGDLNSDKQTDLFVLRERNDLIVFLADQNAPYFKPKVKVSFKN 95
Query: 397 SDIVITXIVPXDYDGDAYMDILLTTQNVNNTSKFHNVSILWGR 525
+IT +VP DYDGD+ MD+LLT N I WG+
Sbjct: 96 HSALITSVVPGDYDGDSQMDVLLTYLPKNYAKSELGAVIFWGQ 138
>AF212247-1|AAG41782.1| 609|Homo sapiens CDA08 protein.
Length = 609
Score = 74.9 bits (176), Expect = 2e-13
Identities = 37/91 (40%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +1
Query: 256 GIIAAFGDFNSDELTDAFVIKNSSTVNVFLAYDKEPFLRPS-EFACNFSDIVITXIVPXD 432
G +AAFGD NSD+ TD FV++ + + VFLA P+ +P + + +IT +VP D
Sbjct: 45 GTLAAFGDLNSDKQTDLFVLRERNDLIVFLADQNAPYFKPKVKVSFKNHSALITSVVPGD 104
Query: 433 YDGDAYMDILLTTQNVNNTSKFHNVSILWGR 525
YDGD+ MD+LLT N I WG+
Sbjct: 105 YDGDSQMDVLLTYLPKNYAKSELGAVIFWGQ 135
>X55283-1|CAA38997.1| 287|Homo sapiens asialoglycoprotein receptor
protein.
Length = 287
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 142 RLCSKMVYTIFILLFNVILSTSSFVSDITXSSFGKYSEGIIAAFGDFNSDELTDAFVI 315
RLCS + +++ L FN++L V+ + + AF +F+S LT+ I
Sbjct: 33 RLCSMVCFSLLALSFNILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAI 90
>BC017251-1|AAH17251.1| 287|Homo sapiens asialoglycoprotein
receptor 2 protein.
Length = 287
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 142 RLCSKMVYTIFILLFNVILSTSSFVSDITXSSFGKYSEGIIAAFGDFNSDELTDAFVI 315
RLCS + +++ L FN++L V+ + + AF +F+S LT+ I
Sbjct: 33 RLCSMVCFSLLALSFNILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAI 90
>AF529374-1|AAQ09608.1| 306|Homo sapiens HBxAg-binding protein
protein.
Length = 306
Score = 31.1 bits (67), Expect = 3.4
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +1
Query: 142 RLCSKMVYTIFILLFNVILSTSSFVSDITXSSFGKYSEGIIAAFGDFNSDELTDAFVI 315
RLCS + +++ L FN++L V+ + + AF +F+S LT+ I
Sbjct: 52 RLCSMVCFSLLALSFNILLLVVICVTGSQSAQLQAELRSLKEAFSNFSSSTLTEVQAI 109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,079,335
Number of Sequences: 237096
Number of extensions: 1574909
Number of successful extensions: 2309
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2222
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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