Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_K17
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    24   0.94 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   1.6  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    22   3.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    22   3.8  

>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 425 KKVIISAPSADAPMFVVGVNLQA 493
           K V+++ P    P   VG NLQA
Sbjct: 188 KPVVVTKPPQAPPFATVGANLQA 210


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 366 SLLVSLPLQIKHLLTWREVLKKLLYQLPVLMPPCLLWV 479
           S L  L  ++KH+L W+   +  ++    L    LLW+
Sbjct: 109 SKLHKLDNKLKHMLIWKSYKRTQIFITCELFFVILLWI 146


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 469 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 377
           KH  I        FF  S++ +R ++C  KD
Sbjct: 48  KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -2

Query: 469 KHGGISTGS*YNNFFSTSLQVSRCFICSGKD 377
           KH  I        FF  S++ +R ++C  KD
Sbjct: 48  KHYNIFACDGCAGFFKRSIRRNRQYVCKAKD 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,634
Number of Sequences: 336
Number of extensions: 3494
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)