Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_K15
(374 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 80 2e-14
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 80 2e-14
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 79 3e-14
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 69 3e-11
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 52 3e-06
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 41 0.006
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 37 0.14
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 36 0.24
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 34 0.98
UniRef50_UPI00015B5518 Cluster: PREDICTED: hypothetical protein;... 33 1.7
UniRef50_Q5F3V0 Cluster: SET and MYND domain-containing protein ... 32 3.0
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 3.9
UniRef50_Q95XD0 Cluster: Exosome (Multiexonuclease complex) comp... 32 3.9
UniRef50_Q1FL75 Cluster: Helix-turn-helix motif; n=1; Clostridiu... 31 6.9
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 31 6.9
UniRef50_UPI00006CF34E Cluster: hypothetical protein TTHERM_0006... 31 9.1
UniRef50_A2DCH4 Cluster: Putative uncharacterized protein; n=3; ... 31 9.1
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 79.8 bits (188), Expect = 2e-14
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +1
Query: 172 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKXRKGQMIQF 342
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDK RKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 36.3 bits (80), Expect = 0.18
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 27 MVNVPKQRRTYXXXXXXXXXXXXSQLQKVQGKGTL-PXAXRRYDRKQQGLRWSVQTHLQK 203
MVNVPK RRT+ +Q +K GK +L RRYDRKQ G + +K
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKK--GKDSLYAQGRRRYDRKQSGYGGQTKPIFRK 58
Query: 204 EGK 212
+ K
Sbjct: 59 KAK 61
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 79.8 bits (188), Expect = 2e-14
Identities = 36/59 (61%), Positives = 43/59 (72%), Gaps = 2/59 (3%)
Frame = +1
Query: 172 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKXRKGQMIQF 342
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDK RKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 36.3 bits (80), Expect = 0.18
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 27 MVNVPKQRRTYXXXXXXXXXXXXSQLQKVQGKGTL-PXAXRRYDRKQQGLRWSVQTHLQK 203
MVNVPK RRT+ +Q +K GK +L RRYDRKQ G + +K
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKK--GKDSLYAQGKRRYDRKQSGYGGQTKPIFRK 58
Query: 204 EGK 212
+ K
Sbjct: 59 KAK 61
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 79.0 bits (186), Expect = 3e-14
Identities = 43/97 (44%), Positives = 57/97 (58%)
Frame = +1
Query: 52 GRTAKNVNATKYTRYHSYKKSKAKARCPXLXDVMIVNSRAYGGQSKPIFXXXXXXXXXIV 231
G+ K+ N K T+Y K+SK A+ D +GGQ+KPIF IV
Sbjct: 14 GKCRKHTNH-KVTQYKKGKESKF-AQGRRRYDR---KQSGFGGQTKPIFRKKAKTTKKIV 68
Query: 232 LRLECADCKVRSQVALKRCKHFELGGDKXRKGQMIQF 342
LR+EC +CK + Q+ +KRCKHFELGG K +GQ+IQF
Sbjct: 69 LRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 33.9 bits (74), Expect = 0.98
Identities = 20/62 (32%), Positives = 25/62 (40%)
Frame = +3
Query: 27 MVNVPKQRRTYXXXXXXXXXXXXSQLQKVQGKGTLPXAXRRYDRKQQGLRWSVQTHLQKE 206
MVNVPK RRT+ K + RRYDRKQ G + +K+
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQGRRRYDRKQSGFGGQTKPIFRKK 60
Query: 207 GK 212
K
Sbjct: 61 AK 62
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 68.9 bits (161), Expect = 3e-11
Identities = 30/52 (57%), Positives = 35/52 (67%)
Frame = +1
Query: 172 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKXRKG 327
YGGQ+KP+F IVLRL+C CK SQ +KRCKHFE+GGDK KG
Sbjct: 96 YGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
Score = 35.1 bits (77), Expect = 0.42
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +3
Query: 30 VNVPKQRRTYXXXXXXXXXXXXSQLQKVQGKGTLPX-AXRRYDRKQQGLRWSVQTHLQKE 206
VNVPK ++TY Q +GK +L RRYDRKQ G + K+
Sbjct: 48 VNVPKTKKTYCKSKECRKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFHKK 107
Query: 207 GK 212
K
Sbjct: 108 AK 109
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 52.4 bits (120), Expect = 3e-06
Identities = 22/34 (64%), Positives = 26/34 (76%)
Frame = +1
Query: 226 IVLRLECADCKVRSQVALKRCKHFELGGDKXRKG 327
IVL+L+C CK SQ +KRCKHFE+GGDK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 41.1 bits (92), Expect = 0.006
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +2
Query: 170 LTVVSPNPSSKRRQKPLRKLCSVLSVLIAR*DHRLH*RDASTLSLVVTR 316
+TVV P+ SS RR +P R+L SV S L AR DAST S VVTR
Sbjct: 54 VTVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 36.7 bits (81), Expect = 0.14
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 166 RAYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFEL 303
+ YGGQ+KP+F ++L C CK +LKR K F++
Sbjct: 46 QGYGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTKRFQI 91
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 35.9 bits (79), Expect = 0.24
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +1
Query: 166 RAYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKXRK 324
+ +GG+ KPI I LR C CK + L R + FE +K +K
Sbjct: 46 KGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 33.9 bits (74), Expect = 0.98
Identities = 12/18 (66%), Positives = 16/18 (88%)
Frame = +1
Query: 274 ALKRCKHFELGGDKXRKG 327
+++RCKHFE+GGDK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_UPI00015B5518 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 1315
Score = 33.1 bits (72), Expect = 1.7
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 126 CLCLGLFVAVIPCVLCGIYIFCSTSC 49
C CL + IPC CG ++FCS C
Sbjct: 211 CHCLSIAWTGIPCDNCGWFVFCSEKC 236
>UniRef50_Q5F3V0 Cluster: SET and MYND domain-containing protein 4;
n=3; Gallus gallus|Rep: SET and MYND domain-containing
protein 4 - Gallus gallus (Chicken)
Length = 742
Score = 32.3 bits (70), Expect = 3.0
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 1/67 (1%)
Frame = -3
Query: 243 LKTEHNFLSGFCLLFEDGFGLTTVSPAVYDHNVX*XWAACL-CLGLFVAVIPCVLCGIYI 67
L E F+S C D L S V+D V C CL +A IPC C
Sbjct: 256 LLKEKAFVSVLCPGEGDSLLLQDSSETVWDTRVTNADLYCHHCLKQLLASIPCCGCSYAK 315
Query: 66 FCSTSCA 46
+CS +CA
Sbjct: 316 YCSQNCA 322
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 3.9
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -1
Query: 338 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 231
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_Q95XD0 Cluster: Exosome (Multiexonuclease complex)
component protein 2; n=2; Caenorhabditis|Rep: Exosome
(Multiexonuclease complex) component protein 2 -
Caenorhabditis elegans
Length = 303
Score = 31.9 bits (69), Expect = 3.9
Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Frame = +3
Query: 96 SQLQKVQGKGTLPXAXR--RYDRKQQGLRWSVQTHLQKEGKNH 218
+++Q+VQ GTL R +Y + QQG+ V HL K+ K H
Sbjct: 149 AEVQQVQHDGTLMLHTRNNKYGKLQQGILIKVPPHLIKKSKKH 191
>UniRef50_Q1FL75 Cluster: Helix-turn-helix motif; n=1; Clostridium
phytofermentans ISDg|Rep: Helix-turn-helix motif -
Clostridium phytofermentans ISDg
Length = 268
Score = 31.1 bits (67), Expect = 6.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 126 CLCLGLFVAVIPCVLCGIYIFCSTSCAVLVRSPFL 22
C+ LGLF+ ++ VL G I C C + + P L
Sbjct: 105 CMVLGLFLNILLAVLGGYLILCGIICQAIQKHPGL 139
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 31.1 bits (67), Expect = 6.9
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -3
Query: 108 FVAVIPCVLCGIYIFCSTSC 49
F+ +IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_UPI00006CF34E Cluster: hypothetical protein
TTHERM_00069490; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00069490 - Tetrahymena
thermophila SB210
Length = 1107
Score = 30.7 bits (66), Expect = 9.1
Identities = 12/25 (48%), Positives = 17/25 (68%), Gaps = 1/25 (4%)
Frame = +1
Query: 238 LECADCKVRSQVAL-KRCKHFELGG 309
LEC +CK+ Q AL +C +F+L G
Sbjct: 526 LECLECKINKQQALSSQCNYFDLNG 550
>UniRef50_A2DCH4 Cluster: Putative uncharacterized protein; n=3;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1966
Score = 30.7 bits (66), Expect = 9.1
Identities = 13/26 (50%), Positives = 20/26 (76%)
Frame = -3
Query: 78 GIYIFCSTSCAVLVRSPFLSSFGTDI 1
G+Y+F + SC +VRS F++SF TD+
Sbjct: 1872 GLYVFFTLSCGKMVRS-FINSFFTDL 1896
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,677,702
Number of Sequences: 1657284
Number of extensions: 5812178
Number of successful extensions: 14500
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 14170
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14485
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14019197511
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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