Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_K14
(539 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 119 4e-26
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 101 1e-20
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 93 3e-18
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 87 2e-16
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 82 9e-15
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 79 5e-14
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 75 1e-12
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 69 9e-11
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 61 1e-08
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 59 7e-08
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 57 3e-07
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 55 1e-06
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 53 5e-06
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 52 6e-06
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 50 3e-05
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 49 8e-05
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 48 1e-04
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 40 0.037
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 38 0.11
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 0.79
UniRef50_A7QKF0 Cluster: Chromosome chr2 scaffold_112, whole gen... 35 1.0
UniRef50_A5NX10 Cluster: Molybdopterin-guanine dinucleotide bios... 33 3.2
UniRef50_A5DK33 Cluster: Putative uncharacterized protein; n=1; ... 33 3.2
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 33 4.2
UniRef50_Q4T049 Cluster: Xylose isomerase; n=4; Deuterostomia|Re... 33 5.6
UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3; ... 33 5.6
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 32 7.3
UniRef50_Q64HK2 Cluster: Blue light regulator 2; n=1; Trichoderm... 32 9.7
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 119 bits (287), Expect = 4e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
SALPYRRSVPTWLKLT+DDVKEQIYKL KKGLTPSQIGV+LRDSHGVAQVRFVTG KILR
Sbjct: 14 SALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILR 73
Score = 112 bits (269), Expect = 6e-24
Identities = 55/76 (72%), Positives = 59/76 (77%)
Frame = +2
Query: 284 IMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKS 463
I+K+ G I KAVA+RKHLERNRKDKD+KF LIL ESRIHRLARYYKTK
Sbjct: 74 ILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKR 133
Query: 464 VLPPNWKYESSTASAL 511
VLPPNWKYESSTASAL
Sbjct: 134 VLPPNWKYESSTASAL 149
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 101 bits (242), Expect = 1e-20
Identities = 53/90 (58%), Positives = 59/90 (65%)
Frame = +2
Query: 242 LPK*DS*LAKRSSAIMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXE 421
+P+ S + I+KA G I KAVA+RKHLERNRKDKDSKF LIL E
Sbjct: 60 IPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVE 119
Query: 422 SRIHRLARYYKTKSVLPPNWKYESSTASAL 511
SRIHRLARYYK LPP WKYES+TAS L
Sbjct: 120 SRIHRLARYYKKTKKLPPVWKYESTTASTL 149
Score = 92.7 bits (220), Expect = 5e-18
Identities = 43/60 (71%), Positives = 48/60 (80%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+ QV+ VTG KILR
Sbjct: 14 SALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILR 73
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 93.5 bits (222), Expect = 3e-18
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESSTASAL 511
I KAVA++KHLERNRKDKD+KF L L ESRIH LARY KTK +LPP+WKYES +ASAL
Sbjct: 72 IKKAVAVQKHLERNRKDKDAKFCLSLTESRIHPLARYCKTKRMLPPSWKYESPSASAL 129
Score = 79.4 bits (187), Expect = 5e-14
Identities = 36/48 (75%), Positives = 40/48 (83%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVA 246
S LPY SV WLK T+DD+KEQIYKL KKGLTPSQIGV LRD+HG+A
Sbjct: 14 SVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHGLA 61
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 87.4 bits (207), Expect = 2e-16
Identities = 39/58 (67%), Positives = 46/58 (79%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESSTASAL 511
+ +A MRKHLER+ D+D+K+ LIL ESRIHRLARYYK LPP WKYESSTASA+
Sbjct: 92 VKRATQMRKHLERHTTDRDTKYRLILVESRIHRLARYYKRVKQLPPTWKYESSTASAM 149
Score = 78.6 bits (185), Expect = 9e-14
Identities = 37/70 (52%), Positives = 50/70 (71%)
Frame = +1
Query: 88 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 267
R SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+AQV+ VTG
Sbjct: 9 RGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGIAQVKNVTG 68
Query: 268 KKILRYHEGN 297
+KILR + N
Sbjct: 69 RKILRILKHN 78
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 81.8 bits (193), Expect = 9e-15
Identities = 38/49 (77%), Positives = 41/49 (83%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWK 484
I KAVA+RKHLER+RKDKDSKF LI+ ESRIHRLARYYK LPP WK
Sbjct: 81 IKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVWK 129
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 79.4 bits (187), Expect = 5e-14
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESS 496
I KA+ ++KHLERN+KDKDSKF LIL ES+IHRL+RYYK +P NW+++SS
Sbjct: 89 IKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRYYKRIQRIPINWRFDSS 141
Score = 60.5 bits (140), Expect = 2e-08
Identities = 27/65 (41%), Positives = 41/65 (63%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G+ I++
Sbjct: 11 SLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAGRNIVK 70
Query: 283 YHEGN 297
+ N
Sbjct: 71 ILKKN 75
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 74.9 bits (176), Expect = 1e-12
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRD 231
SAL Y SVPTWLKLT+D+VKEQIYKL KKGLTP QIGV+LRD
Sbjct: 227 SALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 68.5 bits (160), Expect = 9e-11
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +2
Query: 269 KRSSAIMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARY 448
K+ S IMK G + +AV +RKHLE++ KD SK L L ES+I RL +Y
Sbjct: 69 KKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIESKIRRLVKY 128
Query: 449 YKTKSVLPPNWKYESSTASAL 511
YK+K VLP +W+Y TA L
Sbjct: 129 YKSKGVLPADWRYTPETARLL 149
Score = 62.5 bits (145), Expect = 6e-09
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 276
S P R+ VP W++ T + V++ + +L KKG +QIG++LRD++G+ V+ +TGKKI
Sbjct: 14 SKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGIPDVKLITGKKI 71
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 61.3 bits (142), Expect = 1e-08
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = +2
Query: 269 KRSSAIMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARY 448
K+ I+K G I KA+ +R HLE +RKDK ++ L L E++I RL+ Y
Sbjct: 69 KKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEAKIWRLSSY 128
Query: 449 YKTKSVLPPNWKY 487
YK K VLP +WKY
Sbjct: 129 YKEKGVLPADWKY 141
Score = 56.4 bits (130), Expect = 4e-07
Identities = 23/54 (42%), Positives = 39/54 (72%)
Frame = +1
Query: 115 YRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 276
YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+ V+ VTGKKI
Sbjct: 18 YRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGIPSVKQVTGKKI 71
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 58.8 bits (136), Expect = 7e-08
Identities = 28/58 (48%), Positives = 37/58 (63%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESSTASAL 511
I +AV +RKHLE++ KD S L L ES+I RL +YYK K LP +W+Y+ A L
Sbjct: 99 IKRAVNLRKHLEQHPKDLHSMRGLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLL 156
Score = 46.8 bits (106), Expect = 3e-04
Identities = 19/51 (37%), Positives = 32/51 (62%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 255
S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+ V+
Sbjct: 14 SKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGIPTVK 64
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 56.8 bits (131), Expect = 3e-07
Identities = 23/65 (35%), Positives = 37/65 (56%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
S PY + PTWL + D++K + ++G KG+ IG LRD +G+ + V G+ I R
Sbjct: 14 SVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGIGKASDVLGESITR 73
Query: 283 YHEGN 297
+ + N
Sbjct: 74 FLQRN 78
Score = 56.0 bits (129), Expect = 5e-07
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWK 484
+ +A +R HL RKD +K+ LIL SR++R+ARYYK K +P NWK
Sbjct: 92 VHRANTLRSHLNIYRKDNSAKYRLILVSSRMYRVARYYKRKMRIPGNWK 140
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 54.8 bits (126), Expect = 1e-06
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESSTA 502
+ +A + KH+E N +D +K L S+IHRLA+YYK K VLP +WKY A
Sbjct: 94 LKRAYRVYKHIELNPRDTQAKRNYQLIISKIHRLAKYYKRKGVLPKDWKYSIEIA 148
Score = 49.6 bits (113), Expect = 5e-05
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
S P R + P W + V+ +I +L K+G +P+ IG++LRD +G+ VR GK +
Sbjct: 16 SKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQYGIPDVRLYIGKSLQD 75
Query: 283 YHE 291
+ E
Sbjct: 76 FLE 78
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 52.8 bits (121), Expect = 5e-06
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESSTA 502
+ KAV +++HL+ N+ D+ + L L E+++HRL+ YYK +P WKY+S A
Sbjct: 92 VKKAVGLQRHLKENKGDRRNVRSLELIEAKVHRLSVYYKKIGRIPATWKYKSVVA 146
Score = 52.0 bits (119), Expect = 8e-06
Identities = 24/65 (36%), Positives = 36/65 (55%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
S P P+W+ + +++E + K K GLTPSQIG+ LRD H + ++ +T K I
Sbjct: 14 SIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSIPLIKPITKKTIGE 73
Query: 283 YHEGN 297
E N
Sbjct: 74 ILEEN 78
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 52.4 bits (120), Expect = 6e-06
Identities = 26/78 (33%), Positives = 41/78 (52%)
Frame = +2
Query: 269 KRSSAIMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARY 448
K + IM+ G + KAV +++HL N+ D+ + L L E+++HRL Y
Sbjct: 68 KSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEAKVHRLDVY 127
Query: 449 YKTKSVLPPNWKYESSTA 502
YK +P +WKY+S A
Sbjct: 128 YKRIGRIPKDWKYKSVVA 145
Score = 48.8 bits (111), Expect = 8e-05
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
S P P+W++ +V++ I K K+GL PSQIG LRD H + R +TGK + +
Sbjct: 14 SIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAIPLTRPITGKSVTQ 72
Query: 283 YHE 291
E
Sbjct: 73 IME 75
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 50.0 bits (114), Expect = 3e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 276
S+ P+ P W A +++ I + K G++ +QIG +LRD H V VR V GK+I
Sbjct: 14 SSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAVPNVRLVLGKRI 71
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +2
Query: 263 LAKRSSAIMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLA 442
L KR A++ + +AVA+ +HL N +D +K L L E++I RL
Sbjct: 67 LGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEAKIRRLG 126
Query: 443 RYYKTKSVLPPNWKYE 490
YYK + L +W+Y+
Sbjct: 127 NYYKAEGRLDSDWRYK 142
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 48.8 bits (111), Expect = 8e-05
Identities = 27/73 (36%), Positives = 38/73 (52%)
Frame = +2
Query: 278 SAIMKAMGXXXXXXXXXXXXIXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKT 457
S I++ G I KA ++ HL + D +++ L L ES I+RL+RYYK
Sbjct: 73 SKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIESHIYRLSRYYKR 132
Query: 458 KSVLPPNWKYESS 496
LP NWKY S+
Sbjct: 133 IFRLPKNWKYISN 145
Score = 38.3 bits (85), Expect = 0.11
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVKEQIYKLGKKG-LTPSQIGVMLRDSHGVAQVRFVTGKKI 276
+ +PYR+ W LT+ ++ + I L K L PS+IG++LRD V R ++G I
Sbjct: 14 TTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKLVVDTRNISGMNI 72
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 48.4 bits (110), Expect = 1e-04
Identities = 20/52 (38%), Positives = 33/52 (63%)
Frame = +1
Query: 121 RSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 276
R P+W++ + D++KE I K+ K+G+T S IG+ LRD + + R V K+
Sbjct: 20 RERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAIPGTRPVLHMKL 71
Score = 39.5 bits (88), Expect = 0.048
Identities = 19/43 (44%), Positives = 25/43 (58%)
Frame = +2
Query: 362 KHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYE 490
KHL N+ D ++K L S++ RL RYYK S LP +W E
Sbjct: 100 KHLSLNKHDMNNKRKAQLIMSKMLRLIRYYKRTSRLPQDWSLE 142
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 39.9 bits (89), Expect = 0.037
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Frame = +1
Query: 88 RVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDS--HG--VAQVR 255
R S S P P W + D ++ ++ +L ++G +PS+IG+ LRD G + V
Sbjct: 9 RGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVS 68
Query: 256 FVTGKKILRYHEGN 297
TGKK+ E N
Sbjct: 69 LATGKKVTEILEEN 82
Score = 35.1 bits (77), Expect = 1.0
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +2
Query: 338 IXKAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKYESSTASALXG 517
+ +AV +R H++ N D +K L +S+I RL YY+ V N+ Y A G
Sbjct: 96 LERAVRLRDHMDENPGDYQNKRALQNTQSKIRRLIDYYRGDEV-DENFTYSYDNAVEALG 154
Query: 518 L 520
L
Sbjct: 155 L 155
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 38.3 bits (85), Expect = 0.11
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = +1
Query: 103 SALPYRRSVPTWLKLTADDVK 165
SALPYRRSV WLKL +DDVK
Sbjct: 457 SALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 0.79
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +1
Query: 124 SVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVR 255
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_A7QKF0 Cluster: Chromosome chr2 scaffold_112, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_112, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 257
Score = 35.1 bits (77), Expect = 1.0
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +1
Query: 361 ETLGTQQERQRQQIXAYFXRVQDSQTGPLLQN*ECASS*LEI*V*HCFSS 510
+T G ++ QR ++ R QDS T PLLQ + ASS LEI V HC S
Sbjct: 135 DTSGVIKKGQRLKVPIGSCREQDSLTCPLLQENKEASSSLEIRVHHCHHS 184
>UniRef50_A5NX10 Cluster: Molybdopterin-guanine dinucleotide
biosynthesis protein A; n=4; Alphaproteobacteria|Rep:
Molybdopterin-guanine dinucleotide biosynthesis protein
A - Methylobacterium sp. 4-46
Length = 175
Score = 33.5 bits (73), Expect = 3.2
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = +1
Query: 25 RCQIGDLV-KSRKHGSYA-RSWLRVSPXSALPYRRSVPTWLKLTADDVKEQIY 177
R ++G +V K R G +A +WL P +ALP R P W +L A + +E Y
Sbjct: 14 RYEVGVIVAKRRLKGPWASHAWL---PVAALPGRPETPPWTRLGASEAEETFY 63
>UniRef50_A5DK33 Cluster: Putative uncharacterized protein; n=1;
Pichia guilliermondii|Rep: Putative uncharacterized
protein - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 1160
Score = 33.5 bits (73), Expect = 3.2
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = +1
Query: 61 HGSYARSWLRVSPXSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLR-DSH 237
HG Y+ V P LP RS+PTW A ++ + + G+ + S I L SH
Sbjct: 178 HGEYSFYENHVRPLYLLPAYRSLPTWADTLATTIQFTLSRKGEIQVNISSISRFLTGSSH 237
Query: 238 GVAQVRFV 261
+ Q R +
Sbjct: 238 SLKQKRLL 245
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 33.1 bits (72), Expect = 4.2
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +2
Query: 344 KAVAMRKHLERNRKDKDSKFXLILXESRIHRLARYYKTKSVLPPNWKY 487
K + + +HL+ KDK +K L L + +L RY + K P W++
Sbjct: 241 KIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_Q4T049 Cluster: Xylose isomerase; n=4; Deuterostomia|Rep:
Xylose isomerase - Tetraodon nigroviridis (Green puffer)
Length = 414
Score = 32.7 bits (71), Expect = 5.6
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = +3
Query: 63 WVVCTLLAKGISQXGAALPPQCPYLVEIDCRRCKGTNLQTWKEGSHSLTNWCNAEGF 233
WV C L A GAA P C L + KG ++ K G+ + W EGF
Sbjct: 117 WVTCNLFAHPRYMNGAATNPDCHVLAFAGAQVKKGLDVAR-KLGAENFVFWGGREGF 172
>UniRef50_Q8G0I1 Cluster: Putative uncharacterized protein; n=3;
Brucella|Rep: Putative uncharacterized protein -
Brucella suis
Length = 276
Score = 32.7 bits (71), Expect = 5.6
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +1
Query: 127 VPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQV 252
+PTWL L ++ Y+L K +TP+ IG+ + + G++++
Sbjct: 149 LPTWLGLRRGKLRPLYYRLIHKEVTPASIGITVFGNDGISRL 190
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 32.3 bits (70), Expect = 7.3
Identities = 18/50 (36%), Positives = 28/50 (56%)
Frame = +1
Query: 133 TWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILR 282
T L++T D K + + K G+ GV+ R +HG A++R T K +LR
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR 202
>UniRef50_Q64HK2 Cluster: Blue light regulator 2; n=1; Trichoderma
atroviride|Rep: Blue light regulator 2 - Trichoderma
atroviride (Hypocrea atroviridis)
Length = 484
Score = 31.9 bits (69), Expect = 9.7
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 141 EIDCRRCKGTNLQTWKEGSHSLTNWCNAEGFTWSCPSKIRNWQKDPPLS 287
E C C + W++G + CNA G W+ K RN PLS
Sbjct: 427 EYVCTDCGTLDSPEWRKGPNGPKTLCNACGLRWAKKEKKRNNSIGTPLS 475
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 461,873,403
Number of Sequences: 1657284
Number of extensions: 8146311
Number of successful extensions: 19738
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 19268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19735
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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