Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP03_F_K08
         (621 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0785 - 31730300-31730701,31730785-31730856,31730940-317328...    28   6.9  
02_02_0493 + 10921284-10922558                                         28   6.9  

>02_05_0785 -
           31730300-31730701,31730785-31730856,31730940-31732864,
           31733000-31733150,31733944-31734009,31734247-31734645
          Length = 1004

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = -2

Query: 185 DVISSLRCLSLCRVNAKEFRFR 120
           DVI SLRCL     N KE RF+
Sbjct: 553 DVIKSLRCLYEISKNLKEIRFK 574


>02_02_0493 + 10921284-10922558
          Length = 424

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 7/49 (14%)
 Frame = -3

Query: 418 LHXPLEHQEVGRVLVM*L*TWKD-------LALMTEXVWNFH*GVSGGS 293
           +H PL+H E G + +    T  D       L    E VW FH G  GGS
Sbjct: 154 VHRPLQHPERGLLAIPFSSTHDDDDDVEPDLGFDDENVWGFHFGEDGGS 202


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,821,695
Number of Sequences: 37544
Number of extensions: 296117
Number of successful extensions: 701
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 701
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)