Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP03_F_K08
(621 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC025930-1|AAH25930.1| 608|Homo sapiens nuclear protein localiz... 50 7e-06
AK000664-1|BAA91314.1| 608|Homo sapiens protein ( Homo sapiens ... 50 7e-06
AB040932-1|BAA96023.1| 660|Homo sapiens KIAA1499 protein protein. 50 7e-06
AK023272-1|BAB14499.1| 520|Homo sapiens NAc6ST). protein. 40 0.009
AK023046-1|BAB14372.1| 520|Homo sapiens protein ( Homo sapiens ... 40 0.009
>BC025930-1|AAH25930.1| 608|Homo sapiens nuclear protein
localization 4 homolog (S. cerevisiae) protein.
Length = 608
Score = 50.0 bits (114), Expect = 7e-06
Identities = 23/91 (25%), Positives = 49/91 (53%)
Frame = +1
Query: 16 SQKMLLRVQSPEGTARVEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEITSSKS 195
++ +++RVQSP+G R+ + A ++ + + F+++ +R + EIT+S +
Sbjct: 2 AESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSN 61
Query: 196 RQLRDCGLCHGDMIYLNPVNGAVLFEQSSTS 288
+ L + HGD+++L P + A + TS
Sbjct: 62 KSLNLLKIKHGDLLFLFPSSLAGPSSEMETS 92
Score = 39.5 bits (88), Expect = 0.009
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 430 LYKVSGLIERXRDEKLCRHNLNGKCVHC 513
L K G I R RD +LCRH GKCVHC
Sbjct: 114 LSKQDGKIYRSRDPQLCRHGPLGKCVHC 141
Score = 38.7 bits (86), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 PLXPWDEXYLK--EHNIKHMSFHSYLPKIT 599
PL P+DE YL E +KHMSFH+Y+ K+T
Sbjct: 143 PLEPFDEDYLNHLEPPVKHMSFHAYIRKLT 172
>AK000664-1|BAA91314.1| 608|Homo sapiens protein ( Homo sapiens
cDNA FLJ20657 fis, clone KAT01069. ).
Length = 608
Score = 50.0 bits (114), Expect = 7e-06
Identities = 23/91 (25%), Positives = 49/91 (53%)
Frame = +1
Query: 16 SQKMLLRVQSPEGTARVEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEITSSKS 195
++ +++RVQSP+G R+ + A ++ + + F+++ +R + EIT+S +
Sbjct: 2 AESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSN 61
Query: 196 RQLRDCGLCHGDMIYLNPVNGAVLFEQSSTS 288
+ L + HGD+++L P + A + TS
Sbjct: 62 KSLNLLKIKHGDLLFLFPSSLAGPSSEMETS 92
Score = 39.5 bits (88), Expect = 0.009
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 430 LYKVSGLIERXRDEKLCRHNLNGKCVHC 513
L K G I R RD +LCRH GKCVHC
Sbjct: 114 LSKQDGKIYRSRDPQLCRHGPLGKCVHC 141
Score = 38.7 bits (86), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 PLXPWDEXYLK--EHNIKHMSFHSYLPKIT 599
PL P+DE YL E +KHMSFH+Y+ K+T
Sbjct: 143 PLEPFDEDYLNHLEPPVKHMSFHAYIRKLT 172
>AB040932-1|BAA96023.1| 660|Homo sapiens KIAA1499 protein protein.
Length = 660
Score = 50.0 bits (114), Expect = 7e-06
Identities = 23/91 (25%), Positives = 49/91 (53%)
Frame = +1
Query: 16 SQKMLLRVQSPEGTARVEVLDSDVTAHLFXRIYEALNLNSFAFTLHKDRQRKEEITSSKS 195
++ +++RVQSP+G R+ + A ++ + + F+++ +R + EIT+S +
Sbjct: 45 AESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGFSVYINRNKTGEITASSN 104
Query: 196 RQLRDCGLCHGDMIYLNPVNGAVLFEQSSTS 288
+ L + HGD+++L P + A + TS
Sbjct: 105 KSLNLLKIKHGDLLFLFPSSLAGPSSEMETS 135
Score = 39.5 bits (88), Expect = 0.009
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 430 LYKVSGLIERXRDEKLCRHNLNGKCVHC 513
L K G I R RD +LCRH GKCVHC
Sbjct: 157 LSKQDGKIYRSRDPQLCRHGPLGKCVHC 184
Score = 38.7 bits (86), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 PLXPWDEXYLK--EHNIKHMSFHSYLPKIT 599
PL P+DE YL E +KHMSFH+Y+ K+T
Sbjct: 186 PLEPFDEDYLNHLEPPVKHMSFHAYIRKLT 215
>AK023272-1|BAB14499.1| 520|Homo sapiens NAc6ST). protein.
Length = 520
Score = 39.5 bits (88), Expect = 0.009
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 430 LYKVSGLIERXRDEKLCRHNLNGKCVHC 513
L K G I R RD +LCRH GKCVHC
Sbjct: 26 LSKQDGKIYRSRDPQLCRHGPLGKCVHC 53
Score = 38.7 bits (86), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 PLXPWDEXYLK--EHNIKHMSFHSYLPKIT 599
PL P+DE YL E +KHMSFH+Y+ K+T
Sbjct: 55 PLEPFDEDYLNHLEPPVKHMSFHAYIRKLT 84
>AK023046-1|BAB14372.1| 520|Homo sapiens protein ( Homo sapiens
cDNA FLJ12984 fis, clone NT2RP3000047, weakly similar to
NPL4 PROTEIN. ).
Length = 520
Score = 39.5 bits (88), Expect = 0.009
Identities = 17/28 (60%), Positives = 18/28 (64%)
Frame = +1
Query: 430 LYKVSGLIERXRDEKLCRHNLNGKCVHC 513
L K G I R RD +LCRH GKCVHC
Sbjct: 26 LSKQDGKIYRSRDPQLCRHGPLGKCVHC 53
Score = 38.7 bits (86), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
Frame = +3
Query: 516 PLXPWDEXYLK--EHNIKHMSFHSYLPKIT 599
PL P+DE YL E +KHMSFH+Y+ K+T
Sbjct: 55 PLEPFDEDYLNHLEPPVKHMSFHAYIRKLT 84
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,334,440
Number of Sequences: 237096
Number of extensions: 1625271
Number of successful extensions: 3230
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3230
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6691573490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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